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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14239#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 904 fasta sequence
[AACTAGTTTCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT-TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG-CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG-TTGGTGAAGAT-GAGACGGACCGGAAAGTGCCAAGCTTTGC-GGAGACGACAGAAAAGAA-TGAA-GAGGAGGAAACAG-TAACGAAACCA-TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGAT]
[+] EMBL CB637739 [AACTAGTTGCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TATAACAAAAACTTGTATATGTTAGGTGCTAACTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAG ]
[+] EMBL CB640769 [ AGTTTCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGATGACGATAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGC ]
[+] EMBL CB652835 [ GTTTCCAAGGAGCGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAACAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCANAGGAGAAAACCATGTTCTTCGTAAA ]
[+] EMBL OSS12884A [ AAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGNTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGGCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGGACCAACTGCGTCGA TNAGCAGAACCCTGTTCTTGGTNAACAACAGAGC ]
[+] EMBL OSS13104A [ AAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGAAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCG TCTCCTNA CTACATCTCCTTTTCCCG CTTTTNG CATCTACTNG CGGTTTTCGAGAG ACG NCTTGGTGATGAAG ACG ACCA CTGGGTNGAtt ]
[+] EMBL CB639988 [ ATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCATGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTT ]
[+] EMBL CB673173 [ TGCGGATCCTTGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTACTCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGGTCCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGT ]
[+] EMBL CB627352 [ TAAGCCTCTATAACAAAAACTTGTATATGCTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCGCCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACTACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGCAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACA ]
[+] EMBL CB627940 [ GTGCTCTCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCGCCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACTACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGCAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGAT]
[+] EMBL CB674912 [ ACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGA ]
[+] EMBL OSR27771A [ TCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGNCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGNAGGNTCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGNACCACCTGCGTCGACT ]
[+] EMBL OSS4248A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTTC GGAGACGNCAGAAAAGAA TNAAGGAGGAGGNAACAG TAACGGAANCA TTCGGGGACGGAGCTNAAGCC ]
[+] EMBL OSS3537A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTTCGGGAGACGNCAGAAAAGAA TGAA GAGGNGGAAACAG TAACGGAACCA TTCGGGGACGAAGCTNAGGCCAC ATNTTCTGCGTTNAGAACGGCGTT ATNAGGGGTTTCCATATTCG ]
[+] EMBL OSS4545A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCANCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGNNAGGNTCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGTTCAACAACAGAGCAAAGAAGAGGACGAGAAANATGTTTGGTGAAGATNAAGACGGACCGGAAAGTGCCAAGNTTTTC GGAGACGACAGAAAAGAATTNAG GAGGAGGAAACAGTTACCGAAACCATTCCGGGGACGAAGntt ]
[+] EMBL CA753695 [ GCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||