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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14240#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1857 fasta sequence
[GCTCCACCCCCTCCTCCTCCTTCGAAACCCTA-GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGATGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACACCAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACCATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCACGCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATG-AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTAAAAAAAAAAA]
[+] EMBL CB647577 [GCTCCACCCCTTCCTCCTCCTTCGAAACCCTA GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATCTTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGA ]
[+] EMBL AU070217 [ ctCCTCCTNCTCCTTNGAAACCCTA GCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGNNGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGNNTGCGGAGGCGGCGGNGCCGGGNGCAGGAAGCGGCTGCTGGACGCGCCGGC ]
[+] EMBL CB651286 [ CCTCCTCCTCTTTCGAAACCCTATGCCTCACCACCCCCCGCCACGAGGGAGGAGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCAGCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGGCGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCCGGCCTTCAACTCGGCCGCTAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCGAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCCCATTGAAGTGCCAAACAACCCCc ]
[+] EMBL CB630483 [ GCCGGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGCGCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGAAGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAAGAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTCTGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAGCCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGTGTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTATATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTGGCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGATGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACACCAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACCATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCACGCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATG AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAG ]
[+] EMBL CF196723 [ TTTATCGAGC AATTCAATGAAAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTC ]
[-] EMBL CB630484 [ tga AAAGCTCCTTGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATAAGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATGCCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAA ]
[-] EMBL CB651287 [ AGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCT ]
[+] EMBL CB000896 [ GTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGA ]
[+] EMBL AU173800 [ CTNTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTNTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCAAAAAAAAAAAA]
consensusID : consensus_14240#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 692 fasta sequence
[ATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAAAAAAAAAA]
[-] EMBL CA762179 [ATGTACGGAGTTCTGAGCTAATTGAAGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCTCTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGACCTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTACCAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTACAGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAAGATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAGGTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGACGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTAGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAAAAAAAAAA]
consensusID : consensus_14240#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence
[CTCATACGGCAAATCTGAGCCCGGGGTTGATGATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCATCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAACTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACCCGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGGGNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCCTTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGCCTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTCCCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCTGTCATATACACTGTTCTTGGCAGCTGGCCTCTCTGTCCCCACCCCGAAACATCTGGCCGGAACCATCTGACTAATTAAGCTTCTCATTCCCTTCGGTGTT]
[-] EMBL CB967254 [CTCATACGGCAAATCTGAGCCCGGGGTTGATGATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCATCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAACTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACCCGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGGGNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCCTTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGCCTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTCCCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCTGTCATATACACTGTTCTTGGCAGCTGGCCTCTCTGTCCCCACCCCGAAACATCTGGCCGGAACCATCTGACTAATTAAGCTTCTCATTCCCTTCGGTGTT]
consensusID : consensus_14240#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 397 fasta sequence
[TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAATGAGATCTATACTGGCAACAGGCATGGCCTGGT-CATGTGTGGTCCCACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTA-CCCTTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTT-GCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTT-GCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAAAAAAAAA]
[+] EMBL BI805144 [TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAATGAGATCTATACTGGCAACAGGCATGGCCTGGT CATGTGTGGTCCCACTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTA CCCTTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTT GCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTT GCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAAAAAAAAA]
[+] EMBL BE228645 [ gaattcggcTCNAT CTGGCNACAGGCATGGGCTGGTGCATGTGTGGTCCAACTAGGTNGTAATATGTATATGTACATACGCCCTTTTCGATTTGACCAGAANATTGGATTAGCCATTGTGCACCATCAACCCCTGCCTGGTGCTCACCTTAATTTTTGTATTTTTGGTCTTTTGGCAAAGAATGTTATTCCCTTGTCAGTCAANAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTGACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTt ]
consensusID : consensus_14240#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 118 fasta sequence
[CAGAGGACGAGACAAGGGGTACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA767006 [CAGAGGACGAGACAAGGGGTACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCACGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAA ]
[-] EMBL CA761014 [ AGAGGACGAGACAAGGGGTACCATGTTTTTGGCAGCTGGCCTCTCTGTCCCAACCCCGAAACATTTGGCAGGAACCATCTAACTAATTAAGCTTCTCAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GCTCCACCCCCTCCTCCTCCTTCGAAACCCTAGCCTCACCACCCCCCGCCACGAGGGAGG 60
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 AGCGAGCGGCGCAGTGGTGGACGGCGGCGGCGGCGGGATGGAGGGGCCCAAGAGGTCGCA 120
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GCTGAGGGTGCGGCTCCGCGTGACGGCGCGGCGGAGGGGCGGCGACGGCGGCGCGGACGG 180
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 CGGAGGGAGCGGGGGCGGAGGCGGCGGGGCCGGGGGCAGGAAGCGGCTGCTGGACGCGCC 240
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GGCCTTCAACTCGGCCGCGAAGCTGCAGCGGCGCGAGATCGGGGGCAGGCAGCTCGCCGC 300
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GCGCGGCGGGGGCGCCGCGTCCGCCGTGCCCGAGCGGTTCCGGAACATGCATCTCCAGGA 360
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 AGAGTTCGATACGTATGATCACAATGCCCACCTATTTGTGAAGCTGCAGTTTCTTAAAAA 420
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GAGATCCAAAATAATTGAGATTGTTGCAGCAAAAGATATCATATTTGCTCTTGCGCACTC 480
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 TGGGTTGTGTGCTGCTTTTAGTCGAGTTACAAATAAGCGCATATCCTTCCTGAATTTAAG 540
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 CCCAGATGAAGTCATCCGGAGCTTGTTCTACAACAAGAACAATGATTCACTTATTACTGT 600
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GTCTGTTTATGCGTCAGACCATTTTAGCACATTGAAGTGCAGAACAACCCCAATCGAGTA 660
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 TATAAGGAGGAATCAGTTAGATGCTGGGTTTCCTCTTTTTGAAACAGAATCTCTGAAGTG 720
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GCCTGGCTTTGTGGAGTTTGATGATGTGAATGGAAAAGTACTCACCTACTCAGCTCAGGA 780
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 TGGTATCTATAAGGTCTTCGATTTGAAGAATTACTCTTTTCTATATTCAATACCTGACAC 840
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 CAATGTGCAGGAGATAAAAATAAGTCCAGGAATCATGCTCTTGATATATGAAAGAACACC 900
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 ATGTCATGTTCCTTTGAAGATATTGTCAATTGAAGATGGAAGACCACTANAATCCTTCAC 960
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 GCATTTGTTGCACCGTAATAAGAAAATTGATTTTATTGAGCAAATTCAATGAAAGCTCCT 1020
consensus_14240#1 ------------------------------------------------------------
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 TGTCAAGCAAGAAGATGAGAACCTTCAGATACTTGATGTACGGAGTTCTGAGCTAATTGA 1080
consensus_14240#1 -----------------------------------ATGTACGGAGTTCTGAGCTAATTGA 25
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ----------------------------CTCATACGGCAAATCTGAGCCCGGGGTTGATG 32
consensus_14240#0 AGTCAGTGTTACCAAGTTTATGACTCCATCAGCATTCATTTTTCTGTACGAGAACAATCT 1140
consensus_14240#1 AGTCAGTGTACCCAAGTTTATGCCTCCATCAGCATTCATTTTTCTGTACTAGAACAATCT 85
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 ATGGTACAGTACCTCCCATTGGGTCTATCAACATGAGCGACATTATGACTGGCCAATGCA 92
consensus_14240#0 CTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGAC 1200
consensus_14240#1 CTTCTTGACATTCCGAAACAGGACGGTTGCTGTATGGAATTTTCGAGGAGAGCTCGTGAC 145
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 TCGCCAAGATTGCTGCTAATGATCCCACCNCTCCGTATTGGCCCTCGCCAAGAATGGTAA 152
consensus_14240#0 CTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTAC 1260
consensus_14240#1 CTCATTTGAAGACCATTTGCTTTGGCATCAAGATTGTAGCACCAACAATATCTACATTAC 205
consensus_14240#3 ------------------------------------------------------------
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 CTTCTGAGAGGTCCCCCATTTGGAGCCACCCTTCCCAGAAGCTTCTTGAAGATGTTCACC 212
consensus_14240#0 CAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTAC 1320
consensus_14240#1 CAGTGATCAGGATCTGATTATCTCATACTGCAAATCTGAGGCAGGGGTTGATGATGGTAC 265
consensus_14240#3 -----------------TTGAAGATGTCACACGCGCTTTTTTATGACGAGGAACAGGAAT 43
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 CGCGCTTTTTTATGACCCGAGGACCCGGAACTGAGATCTATACCTGGCCACACGGCATGG 272
consensus_14240#0 AGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCGCCAA 1380
consensus_14240#1 AGTACCTCCAATTGGGTCTATCAACATGAGTGACATTATGACTGGCAAATGCATCTCCAA 325
consensus_14240#3 GAGATCTATACTGGCAACAGGCATGGCCTGGTCATGTGTGGTCCCACTAGGTTGTAATAT 103
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 GNCTGGTGCACTGTGTGGTCCCAACTAGGTTGTAATAAATGTATAATGTACATACCGCCC 332
consensus_14240#0 GATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTCTGAGAG 1440
consensus_14240#1 GATTGCTGCTAATGATCCCACCCTCCGTATTGGCCCTCGCAAGAATGGTAACTTTGAGAG 385
consensus_14240#3 GTATATGTACATACGCCCTTTTCGATTTGACCAGAAGATTGGATTACCCTTGTGCACCAT 163
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 TTTTCCGATTTGACCCACGAAGATNTGGATTAGCCCCTTGTGCACCCATCATTCCCCTGC 392
consensus_14240#0 GTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTTTTTATGA 1500
consensus_14240#1 GTCCTCAATTTGGAGCACCATTCCAGAAGCTCTTGAAGATGTCACAGCGCTTCTTTATGA 445
consensus_14240#3 CATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCTTTTGCAAAGAATGTTA 223
consensus_14240#4 ------------------------------------------------------------
consensus_14240#2 CTGGTGCGTCACCCTTAGTTTTNTGTATTNTTTGGTTCTTTTGGCCCAAGAATGTTATTC 452
consensus_14240#0 CGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAA 1560
consensus_14240#1 CGAGGACAGGAATGAGATCTATACTGGCAACAGGCATGGGCTGGTGCATGTGTGGTCCAA 505
consensus_14240#3 TTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATATCTTTTGTAATGCCCT- 282
consensus_14240#4 ----------------------------------------------CAGAGGACGAGAC- 13
consensus_14240#2 CCTTGTCACGTCCCAGAGAAAAATGTAGTTACCCCCGTATATATCTTTTGTAATGCCCCT 512
consensus_14240#0 CTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGAC-CAGAAGATTGGATT 1619
consensus_14240#1 CTAGGTTGTAATATGTATATGTACATACGCCCTTTTCGATTTGAC-CAGAAGATTGGATT 564
*
consensus_14240#3 ----GTCATATACCATGTTCT--TG-CAGCTGGCCTCTCTG---TCCCAACCACGAAACA 332
consensus_14240#4 ----AAGGGGTACCATGTTCT--TGGCAGCTGGCCTCTCTG---TCCCAACCACGAAACA 64
consensus_14240#2 ----GTCATATACACTGTTCT--TGGCAGCTGGCCTCTCTG---TCCCCACCCCGAAACA 563
consensus_14240#0 AGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCT 1679
consensus_14240#1 AGCCATTGTGCACCATCATCCCCTGCCTGGTGATCACCTTAGTTTTTGTATTTTTGGTCT 624
** * ** ** * * ** * * * * * *
consensus_14240#3 TCTGGCAGGAACCATC--TAACTAATTAAGCTTCTCATTCCTTTCGGTGTTTATTCTAAA 390
consensus_14240#4 TCTGGCAGGAACCATC--TAACTAATTAAGCTTCTCA-----------AAAAAAAAAAAA 111
consensus_14240#2 TCTGGCCGGAACCATC--TGACTAATTAAGCTTCTCATTCCCTTCGGTGTT--------- 612
consensus_14240#0 TTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTATATA 1739
consensus_14240#1 TTTGGCAAAGAATGTTATTCCCTTGTCAGTCAAGAGAAAAATGTAGTTACCCTGTAAAAA 684
* **** * * * ** * * * *
consensus_14240#3 AAAAAAA----------------------------------------------------- 397
consensus_14240#4 AAAAAAA----------------------------------------------------- 118
consensus_14240#2 ------------------------------------------------------------
consensus_14240#0 TCTTTTGTAATGCCCTGTCATATACCATGTTCTTGGCAGCTGGCCTCTCTGTCCCAACCA 1799
consensus_14240#1 AAAAAAAA---------------------------------------------------- 692
consensus_14240#3 ----------------------------------------------------------
consensus_14240#4 ----------------------------------------------------------
consensus_14240#2 ----------------------------------------------------------
consensus_14240#0 CGAAACATCTGGCAGGAACCATCTAACTAATTAAGCTTCTCATTCCTAAAAAAAAAAA 1857
consensus_14240#1 ----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||