cluster # 14259

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Oryza sativa
cluster # 14259 cluster # 14259 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14259#0 length = 1005 sequences # 8
consensus_14259#1 length = 706 sequences # 4

consensus_14259#2 length = 311 sequences # 1
consensus_14259#3 length = 213 sequences # 1
consensus_14259#4 length = 172 sequences # 1

consensusID : consensus_14259#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1005
fasta sequence

                              [GAGTAGAAAATTAGACCGGCTTAAACGCCCCCGCGGTGGTCTTCCTCCCCGACGCAAGCAGACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAATATGAAGTACTGTCTGGATGTCAATATCCATGAAAAGAAACTGAAGGATATTCCATGATTTTATGCCATCTCTGTAATTATATCAGGTTG]

[+] EMBL CF335814             [GAGTAGAAAATTAGACCGGCTTAAACGCCCCCGCGGTGGTCTTCCTCCCCGACGCAGGCAGACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACCTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGGAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF335486             [                                                   ACGCAAGCAGACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAA                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF281184             [                                                    CGCAAGCAGACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAAccccg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF319232             [                                                          CAGACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTT                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB645267             [                                                             ACGACCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAA                                                                                                                                          ]
[+] EMBL AK068599             [                                                               GAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAATATGAAGTACTGTCTGGATGTCAATATCCATGAAAAGAAACTGAAGGATATTCCATGATTTTATGCCATCTCTGTAATTATATCAGGTTG]
[+] EMBL AU063036             [                                                                             CGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTGTAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTG AACTTATGCGGAGTCTT CCCCTCGATACAAGGTGGACATAAGGGTGGCG CTGGATCACATGCAACTGAAACTGCAGTGAACAAGC ACTGAACG CAAAGAACGTGTTGCAG TGCTCTGG AAATCCAAACCTcnt                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB645268             [                                                                                                                                                                                              GAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATGCCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTTTAAAGGGTATATTGCGCT                                                                                                               ]




>consensus_14259#0
GAGTAGAAAATTAGACCGGCTTAAACGCCCCCGCGGTGGTCTTCCTCCCCGACGCAAGCA
GACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCT
GATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTG
TAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATG
CGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAG
AGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATG
ATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGA
CCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGG
TGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGA
ACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGG
AGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTG
TGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCAT
TTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTA
TAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCC
AGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATATTGCGCTGTAGGC
TTTTTACCTCTCGAATATGAAGTACTGTCTGGATGTCAATATCCATGAAAAGAAACTGAA
GGATATTCCATGATTTTATGCCATCTCTGTAATTATATCAGGTTG

consensusID : consensus_14259#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 706
fasta sequence

                              [GGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTAT----ATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGT]

[-] EMBL CF319233             [GGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGAGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTAT    ATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGT]
[-] EMBL CF196832             [                                                                   TACTCANNNGANGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCATTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGTCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAATGAAGTATATTGCGCTGTAGGCTTTTTA       AAAAAAAAAAAAA                     ]
[-] EMBL CF335815             [                                                                                           GTAACTGAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACCTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGGAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGGGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTAT    ATGAAGTATATTGCGCTGTAGGCTTTTTACCTCT  AAAAAAAA                          ]
[-] EMBL CF281183             [                                                                                                 GAGGATTCAGTTGAAATCAATGATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGACCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGTGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGAGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGTGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATTTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTAT    ATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAAAAAAAA                        ]




>consensus_14259#1
GGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAGA
GCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATGA
TGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGAC
CGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGGT
GGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGAA
CGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGGA
GTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTGT
GTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCATT
TGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTTTGATGGTCTGTACCTTTCTAT
AAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCTGCCA
GAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATATTGCGCTGTAGGCT
TTTTACCTCTCGAAAAAAAAAAAAAAAAAAACACTGTCATGCCGGT

consensusID : consensus_14259#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 311
fasta sequence

                              [CCCGCCGCCCGCCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGAGGGATTAATAAATGCTAATCCTGTAGTTCATGAGAAAAAAGAGAGGCGTGCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATGTGCTTTCTTCGTTAACTTATCTACATGCTGTGTACCTTTTCTTTCCTGTTATACTTACCTCTATCTGGAGTTCTGCTGCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF330648             [CCCGCCGCCCGCCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAAAATGGTTGAGGGATTAATAAATGCTAATCCTGTAGTTCATGAGAAAAAAGAGAGGCGTGCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAATATTTGATGTGCTTTCTTCGTTAACTTATCTACATGCTGTGTACCTTTTCTTTCCTGTTATACTTACCTCTATCTGGAGTTCTGCTGCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14259#2
CCCGCCGCCCGCCGCCGGAATTTCGCCATTCTGATATAAATTAGTGCATTGCATCAGAAA
AATGGTTGAGGGATTAATAAATGCTAATCCTGTAGTTCATGAGAAAAAAGAGAGGCGTGC
TCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAGGCTATTGACCAGCTAGAAAT
ATTTGATGTGCTTTCTTCGTTAACTTATCTACATGCTGTGTACCTTTTCTTTCCTGTTAT
ACTTACCTCTATCTGGAGTTCTGCTGCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

consensusID : consensus_14259#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 213
fasta sequence

                              [TTTTTATGGCCTGTGACCTGCCAGNGCATAATTGAACCGATNTAAGGNAATNCNCGTATATGAAGTATATTGCNCTNTAGGCTTTTTACCTCTCGAATNTGAAGTACTGTCTGGATGTCNATATCCNTGAAAAGNAAAAAAAAAAAAAAAAAAANAAANAAAAAAANAAAAAAAAANNNANNAAANNANNNNNNAAAAANNNNNNNNNNNAAA]

[+] EMBL AU092626             [TTTTTATGGCCTGTGACCTGCCAGNGCATAATTGAACCGATNTAAGGNAATNCNCGTATATGAAGTATATTGCNCTNTAGGCTTTTTACCTCTCGAATNTGAAGTACTGTCTGGATGTCNATATCCNTGAAAAGNAAAAAAAAAAAAAAAAAAANAAANAAAAAAANAAAAAAAAANNNANNAAANNANNNNNNAAAAANNNNNNNNNNNAAA]




>consensus_14259#3
TTTTTATGGCCTGTGACCTGCCAGNGCATAATTGAACCGATNTAAGGNAATNCNCGTATA
TGAAGTATATTGCNCTNTAGGCTTTTTACCTCTCGAATNTGAAGTACTGTCTGGATGTCN
ATATCCNTGAAAAGNAAAAAAAAAAAAAAAAAAANAAANAAAAAAANAAAAAAAAANNNA
NNAAANNANNNNNNAAAAANNNNNNNNNNNAAA

consensusID : consensus_14259#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 172
fasta sequence

                              [CAAACCCTTTTTTTTTTTATGGCCTGTGACCTGCCAGAGCATAATTTAAACGATATAAGGAAAAACTTGTATATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAATAAAGGACTGTTTGGATGTCCATATCCCTGGAAAGAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF335485             [CAAACCCTTTTTTTTTTTATGGCCTGTGACCTGCCAGAGCATAATTTAAACGATATAAGGAAAAACTTGTATATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAATAAAGGACTGTTTGGATGTCCATATCCCTGGAAAGAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14259#4
CAAACCCTTTTTTTTTTTATGGCCTGTGACCTGCCAGAGCATAATTTAAACGATATAAGG
AAAAACTTGTATATGAAGTATATTGCGCTGTAGGCTTTTTACCTCTCGAAAATAAAGGAC
TGTTTGGATGTCCATATCCCTGGAAAGAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14259#0      GAGTAGAAAATTAGACCGGCTTAAACGCCCCCGCGGTGGTCTTCCTCCCCGACGCAAGCA 60
consensus_14259#1      ------------------------------------------------------------
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      GACGAGCCCACGGCCGCCGACGCCGCCCGCCGCCGGACTTCGCCGGAATTTCGCCATTCT 120
consensus_14259#1      ------------------------------------------------------------
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      GATATAAATTAGTGCATTGCATCAGAAAAATGGTTGTGGGGTTAATAAATGCTAACCCTG 180
consensus_14259#1      ------------------------------------------------------------
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      TAGTTTATGAGAAAAAAGAGAGGCGTTCTCGGCAGGCACCAGAAACCACAGATGAAAATG 240
consensus_14259#1      ------------------------------------------------------------
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      CGGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAG 300
consensus_14259#1      -GGCAGAGGCTATTGACCAGCTAGAAATATTTGATCATATTAGAGACATAAAGGATCCAG 59
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      AGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATG 360
consensus_14259#1      AGCACCCATACTCACTCGAAGAGCTTAATGTTGTAACTGAGGATTCAGTTGAAATCAATG 119
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      ATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGA 420
consensus_14259#1      ATGAACTTAGTCATGTCAGGGTTACTTTTACCCCAACAGTGGAGCGTTGCAGTATGGCGA 179
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      CCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGG 480
consensus_14259#1      CCGTCATTGGACTTTGCCTGCGTGTGAAACTTATGCGGAGTCTTCCCCCTCGATACAAGG 239
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      TGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGA 540
consensus_14259#1      TGGACATAAGGGTGGCGCCTGGATCACATGCAACTGAAACTGCAGTGAACAAGCAACTGA 299
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      ACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGG 600
consensus_14259#1      ACGACAAAGAACGTGTTGCAGCTGCTCTGGAAAATCCAAACCTTCTGGACATTGTTGAGG 359
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      AGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTG 660
consensus_14259#1      AGTGCTTGTCACCAACGTTTGCTTGAGACCTGAATACAAGTATACAACTGGGAGCCTGTG 419
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      ------------------------------------------------------------
                                                                                   

consensus_14259#0      TGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCAT 720
consensus_14259#1      TGTTGAAATGTTTCAAAACTACACTGAATTACCCTACGACGTGTAGCATGACCTTGTCAT 479
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      --------------------CCCGCCGCCCGCCGCCGGAATTTCGCCATTCTGATATAAA 40
                                                                                   

consensus_14259#0      TTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTT-TGATGGTCTGTACCTTTCT 779
consensus_14259#1      TTGAGATACCTTATGTGGTGCAGGGCGTGTGCATGAATTT-TGATGGTCTGTACCTTTCT 538
consensus_14259#4      ------------------------------------------------------------
consensus_14259#3      ------------------------------------------------------------
consensus_14259#2      TTAGTGCATTGCATCAGAAAAATGGTTGAGGGATTAATAAATGCTAATCCTGTAGTTCAT 100
                                                                                   

consensus_14259#0      ATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCT-- 837
consensus_14259#1      ATAAGGATACTACTGCTCTACCGTTTCATACCTTTTTTCTTTTTATGGCCTGTGACCT-- 596
consensus_14259#4      --------------------------CAAACCCTTTTTTTTTTTATGGCCTGTGACCT-- 32
consensus_14259#3      ---------------------------------------TTTTTATGGCCTGTGACCT-- 19
consensus_14259#2      GAGAAAAAAGAGAGGCGTGCTCGGCAGGCACCAGAAACCACAGATGAAAATGCGGCAGAG 160
                                                                         ** * *    

consensus_14259#0      GCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATAT-TGCGCTGT 896
consensus_14259#1      GCCAGAGCATAATTGAAACGATATAAGGAAATACTCGTATATGAAGTATAT-TGCGCTGT 655
consensus_14259#4      GCCAGAGCATAATTTAAACGATATAAGGAAAAACTTGTATATGAAGTATAT-TGCGCTGT 91
consensus_14259#3      GCCAGNGCATAATTGAACCGATNTAAGGNAATNCNCGTATATGAAGTATAT-TGCNCTNT 78
consensus_14259#2      GCTATTGACCAGCTAGAAATATTTGATGTGCTTTCTTCGT-TAACTTATCTACATGCTGT 219
                       ** *  *   *  *  *   ** * * *           * * *  *** *     ** *

consensus_14259#0      AGGCTTTTTACCTCTCGA-ATATGAAGTACTGTCTGGATGTCAATATCCATGAAAAGAAA 955
consensus_14259#1      AGGCTTTTTACCTCTCGA-A-AAAAAAAAAAAAAAAAACACTGTCATGCCGGT------- 706
consensus_14259#4      AGGCTTTTTACCTCTCGA-AAATAAAGGACTGTTTGGATGTCCATATCCCTGGAAAGAAA 150
consensus_14259#3      AGGCTTTTTACCTCTCGA-ATNTGAAGTACTGTCTGGATGTCNATATCCNTGAAAAGNAA 137
consensus_14259#2      GTACCTTTTCTTTCCTGTTATACTTACCTCTATCTGGAGTTCTGCTGCCCTCAAAAAAAA 279
                          * ****   **  *  *     *           *          *           

consensus_14259#0      CTGAAGGATATTCCATGATTTTATGCCATCTCTGTAATTATATCAGGTTG---------- 1005
consensus_14259#1      ------------------------------------------------------------
consensus_14259#4      AAAAAAAAAAAAAAAAAAAAAA-------------------------------------- 172
consensus_14259#3      AAAAAAAAAAAAAAAAANAAANAAAAAAANAAAAAAAAANNNANNAAANNANNNNNNAAA 197
consensus_14259#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 311
                                                                                   

consensus_14259#0      ----------------
consensus_14259#1      ----------------
consensus_14259#4      ----------------
consensus_14259#3      AANNNNNNNNNNNAAA 213
consensus_14259#2      ----------------