cluster # 14265

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Oryza sativa
cluster # 14265 cluster # 14265 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14265#0 length = 1115 sequences # 4
consensus_14265#1 length = 1063 sequences # 5

consensus_14265#2 length = 520 sequences # 4
consensus_14265#3 length = 379 sequences # 1
consensus_14265#4 length = 346 sequences # 1

consensusID : consensus_14265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1115
fasta sequence

                              [GGCACGAGCGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGANTTCGAGATGCCCGCAGTAACCCTCGACNTCTGATCGGCATCCACCACCCTCCCNGCGGCGCTGCCTTGGCCCTTAAGTCCTCTCCTCCTGTTGTCTCTTACTCTTGTGCAAGTGCAACATACATTGCTCTCATGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTTGATTATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTCACTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGATTTGCTCTGCCAAGTTCAGAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGTAGTTCATAAGTGTGAGGGCATTAGGGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCACATGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTAGTGACAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCGGGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGGTATGTATAGAAAGTGCCATTGTTTTCATCTGATAAACGAGATCAATATATCATGTGGT]

[+] EMBL AA753114             [GGCACGAGCGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGANTTCGAGATGCCCGCAGTAACCCTCGACNTCTGATCGGCATCCACCACCCTCCCNGCGGCGCTGCCTTGGCCCTTAAGTCCTCTCCTCCTGTTGTCTCTTACTCTTGTGCAAGTNCAACATACATTGCTCTCNTGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACtan                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BI809899             [                                                                                                                                           GGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGGTCCTCTCCTCCTGTTGTCTCTTACTCTTGTGCAAGTGCAACATACATTGCTCTCATGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAAaaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB667492             [                                                                                                                                                                                                                                                                                                                                                                  TCTCCTCCTGTTGTCTCTTACTCTTGTGCAAGTGCAACATACATTGCTCTCATGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTTGATTATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTCACTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGATTTGCTCTGCCAAGTTCAGAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGTAGTTCATAAGTGTGAGGGCATTAGGGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCACATGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTAGTGACAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCGGGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGGTATGTATAGAAAGTGCCATT                                      ]
[+] EMBL AK062994             [                                                                                                                                                                                                                                                                                                                                                                                                        ATACATTGCTCTCATGTGATTGTTGAATGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTTGATTATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTCACTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGATTTGCTCTGCCAAGTTCAGAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGTAGTTCATAAGTGTGAGGGCATTAGGGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCACATGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTAGTGACAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGATATGTATAGAAAGTGCCATTGTTTTCATCTGATAAACGAGATCAATATATCATGTGGT]




>consensus_14265#0
GGCACGAGCGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGA
GGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCA
GCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGA
GCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAG
CGTCCGGAAGCAGATCGAGGAGATCACCTCCGANTTCGAGATGCCCGCAGTAACCCTCGA
CNTCTGATCGGCATCCACCACCCTCCCNGCGGCGCTGCCTTGGCCCTTAAGTCCTCTCCT
CCTGTTGTCTCTTACTCTTGTGCAAGTGCAACATACATTGCTCTCATGTGATTGTTGAAT
GTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTTG
ATTATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTCA
CTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGATTTGCTCTGCCAAGTTCA
GAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGTA
GTTCATAAGTGTGAGGGCATTAGGGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCACA
TGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTAG
TGACAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCAA
GAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATA
TGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGT
AATTCTCTTTTCTTTCGTTGCCCGGGTAATTTGCTTCAAATACTAAACTATAGCGAGGCT
GCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGGTATGTATAGAAAGTGCCATTGTT
TTCATCTGATAAACGAGATCAATATATCATGTGGT

consensusID : consensus_14265#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1063
fasta sequence

                              [CCACCTCCCGACGAGATGGCCACCCTCCGCCTCACCTCCGTCACCCTCCGCCCCGCCGCCTCCCCCTCGTCCGCCGCCGCGCCGCGGTCCGCCAACTTCGCCCGCGCCGCGGCGCGCGGGTTCCCCTCGCTCCGCCTCGCGCCGCCGCGCCGCCGCGGGGACCTCGCCAGGCGCAGGGCCGCCGCCGACGCCGCGGCGGAGGGGTACGCGACGGCGCTGTCCGAGGTGGCCTCGGAGAACGGCACGCTCGAGGCGACCGTGTCGGACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAAAGGGCAGATATGTATAGAAAGTGCCATTGTTTTCAAAAAAAAG]

[+] EMBL CB667491             [CCACCTCCCGACGAGATGGCCACCCTCCGCCTCACCTCCGTCACCCTCCGCCCCGCCGCCTCCCCCTCGTCCGCCGCCGCGCCGCGGTCCGCCAACTTCGCCCGCGCCGCGGCGCGCGGGTTCCCCTCGCTCCGCCTCGCGCCGCCGCGCCGCCGCGGGGACCTCGCCAGGCGCAGGGCCGCCGCCGACGCCGCGGCGGAGGGGTACGCGACGGCGCTGTCCGAGGTGGCCTCGGAGAACGGCACGCTCGAGGCGACCGTGTCGGACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCG                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB682693             [  ACCTCCCTACAAGATGGCCACCCTCCGCCTCACCTCCGTCACCCTCCGCCCCGCCGCCTCCCCCTCGTCCGCCGCCGCGCCGCGGTCCGCCAACTTCGCCCGCGCCGCGGCGCGCGGGTTCCCCTCGCTCCGCCTCGCGCCGCCGCGCCGCCGCGGGGACCTCGCCAGGCGCAGGGCCGCCGCCGACGCCGCGGCGGAGGGGTACGCGACGGCGCTGTCCGAGGTGGCCTCGGAGAACGGCACGCTCGAGGCGACCGTGTCGGACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGA                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326547             [                                                                                                                                                                                                                                       TCGGAGAACGGCACGCTCGAGGCGACCGTGTCGGACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAG                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB682694             [                                                                                                                                                                                                                                                                                  AGCTGGAGAAGATCTTCGCGGAGGAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAAAGGGCAGATATGTATAGAAAGTGCCATTGTTTTCAAAAAAAAG]
[+] EMBL AA750774             [                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGCGCGG  CTCATGACGCAGATCGTGC GGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCG G AGCAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_14265#1
CCACCTCCCGACGAGATGGCCACCCTCCGCCTCACCTCCGTCACCCTCCGCCCCGCCGCC
TCCCCCTCGTCCGCCGCCGCGCCGCGGTCCGCCAACTTCGCCCGCGCCGCGGCGCGCGGG
TTCCCCTCGCTCCGCCTCGCGCCGCCGCGCCGCCGCGGGGACCTCGCCAGGCGCAGGGCC
GCCGCCGACGCCGCGGCGGAGGGGTACGCGACGGCGCTGTCCGAGGTGGCCTCGGAGAAC
GGCACGCTCGAGGCGACCGTGTCGGACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAG
GCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTCATC
GACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTCGTG
GTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCCTTC
AACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAG
GACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTC
AAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGG
TCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAG
ATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTGCCT
TGGCCCTTAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACT
GAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCA
TTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAA
TTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAA
AGGGCAGATATGTATAGAAAGTGCCATTGTTTTCAAAAAAAAG

consensusID : consensus_14265#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 520
fasta sequence

                              [ANGATTCCCNNGAGCCGGCGCGAANAAGTCCGGGTCCAGACCCGCATCGA-CCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGNCGCGACGGGTCCAGCCTCATCGACATG-AGCGTCCGGAAGCAGATCG-AGGAGA-TCACCTCCG-AGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCAC-CACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCAATT-GTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTT-TTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCC-TTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTT-GCAGATATGTATAGNAAGCGCCATTGTTTTCA---AAAAAAAAAAAAAAAA]

[+] EMBL AA753174             [ANGATTCCCNNGAGCCGGCGCGAANAAGTCCGGGTCCAGACCCGCATCGA CCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGNCGCGACGGGTCCAGCCTCATCGACNTGAAGCGTCCGGAAGCAGATCGAAGGAGN TCACCTCCGAANTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCNTCCAC CACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCAATT GTCACAGGGAATCTCNAAGGCTTGTCAANAATGCTGGTCCTCATCCCCTTCAGAACTGAANATATAATGGAGGAGGCNCAANTNCATATGACGATCACGACAACNTTCTT TTCTGCATTTCTTTCCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTTGTAATTTGCTTCAAATACTAAACTATANCGAGGCTGCTCCTCCATTNTGTACCTGCCGATAAAATTTGGCAGAT                                             ]
[+] EMBL CF197394             [                                           GCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATG AGCGTCCGGAAGCAGATCG AGGAGA TCACCTCCG AGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCAC CACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCAATT GTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTT TTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCC TTGTAATTTGCTTNNNNTACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTT GCAGNTATGTATNNNAAGCGCCATnn                         ]
[+] EMBL BE229475             [                                                                                              cgagCAGCCTCATCGACATG AGCGTCCGGAAGCAGATCG AGGAGA TCACCTCCG AGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCAC CACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCCATT GTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTT TTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCC TTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTT GCAGATATGTATAGAAAGTGCCATTGTTTTCA   AAAAAA          ]
[+] EMBL BI808755             [                                                                                                        CATCGACATG AGCGTCCGGAAGCAGATCG AGGAGAGTCACCTCCG AGTTCGAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACACACCCTCCCGGCGGC CTGCCTTGGCCCTTAGCTCAATTGGTCACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGAC ACATTCTTGTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCC ATGTAATTCTCTTTTCTTTCGTTGCCC TTGTAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTT GCAGATATGTATAGGAAGCGCCCTTGTTTTCATCTAAAAAAAAAAAAAAAA]




>consensus_14265#2
ANGATTCCCNNGAGCCGGCGCGAANAAGTCCGGGTCCAGACCCGCATCGACCGGAGCTCA
TCGCCGGCTTCACCATCCAGTACGGNCGCGACGGGTCCAGCCTCATCGACATGAGCGTCC
GGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGATGCCCGCAGTAACCCTCGACGTCT
GATCGGCATCCACCACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCAATTGTCACAGG
GAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAAT
GGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCAT
TTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAATTTGCTTCAAA
TACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGATAT
GTATAGNAAGCGCCATTGTTTTCAAAAAAAAAAAAAAAAA

consensusID : consensus_14265#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 379
fasta sequence

                              [TGTTTTCATTTGATAAACGAGATCAATATATCATGTGGTGTTCCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTTTTTTCCCTTTTCTATGAAAGGGGGAAATTTTTTAAACCCCGGGGAAATTCCCCTTTTAGGGGGGGTAAATTTAAAACTGGGGAAAAAAAGGGGAAAAACTTTTCCCTGGGGAAAATTGTTTCCCCCCAAAATTTCCACAAAAATTAAAACCCGGAACCTAAAAGGGAAAACCCGGGGGGCCCCAAAGAGGGCCCCCCCCCCCTTTTTTGGGGGGCCCCCCC]

[+] EMBL CF309394             [TGTTTTCATTTGATAAACGAGATCAATATATCATGTGGTGTTCCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTTTTTTCCCTTTTCTATGAAAGGGGGAAATTTTTTAAACCCCGGGGAAATTCCCCTTTTAGGGGGGGTAAATTTAAAACTGGGGAAAAAAAGGGGAAAAACTTTTCCCTGGGGAAAATTGTTTCCCCCCAAAATTTCCACAAAAATTAAAACCCGGAACCTAAAAGGGAAAACCCGGGGGGCCCCAAAGAGGGCCCCCCCCCCCTTTTTTGGGGGGCCCCCCC]




>consensus_14265#3
TGTTTTCATTTGATAAACGAGATCAATATATCATGTGGTGTTCCGTTTTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTTTTTTCCCTTTTCTATGAAAGGG
GGAAATTTTTTAAACCCCGGGGAAATTCCCCTTTTAGGGGGGGTAAATTTAAAACTGGGG
AAAAAAAGGGGAAAAACTTTTCCCTGGGGAAAATTGTTTCCCCCCAAAATTTCCACAAAA
ATTAAAACCCGGAACCTAAAAGGGAAAACCCGGGGGGCCCCAAAGAGGGCCCCCCCCCCC
TTTTTTGGGGGGCCCCCCC

consensusID : consensus_14265#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 346
fasta sequence

                              [CGAGCTCCGCCGCGCACCACTCCCCACCTCCCGACGAGATGGCCACCCTCCGTCTCACCTCCGTCACCCTCCGNCCCGSCGTCTCCCCCTCGTTCCGGCGGCGCGCCGCGTCCCGMCAACTTCGGCCGCGCCGCGCGGCGGGTTCCCCTCGCTCCGCCTCGSSCCGCCGSGCGCCGCGGGGACCTCGCCAGGCGCAGGGCCGCCGCCGACGGCGNGCGRAGGGGTAAGAGAGGCGCTGTCCGAGGTGGCCTCGGAGAACGACAAGCTCGAGGCGACCGTGTSGAACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGACATCGCCGAGTTYTTCGAAAACCGA]

[+] EMBL BE229350             [CGAGCTCCGCCGCGCACCACTCCCCACCTCCCGACGAGATGGCCACCCTCCGTCTCACCTCCGTCACCCTCCGNCCCGSCGTCTCCCCCTCGTTCCGGCGGCGCGCCGCGTCCCGMCAACTTCGGCCGCGCCGCGCGGCGGGTTCCCCTCGCTCCGCCTCGSSCCGCCGSGCGCCGCGGGGACCTCGCCAGGCGCAGGGCCGCCGCCGACGGCGNGCGRAGGGGTAAGAGAGGCGCTGTCCGAGGTGGCCTCGGAGAACGACAAGCTCGAGGCGACCGTGTSGAACCTGGAGAAGCTGGAGAAGATCTTCGCGGAGGAGGACATCGCCGAGTTYTTCGAAAACCGA]




>consensus_14265#4
CGAGCTCCGCCGCGCACCACTCCCCACCTCCCGACGAGATGGCCACCCTCCGTCTCACCT
CCGTCACCCTCCGNCCCGSCGTCTCCCCCTCGTTCCGGCGGCGCGCCGCGTCCCGMCAAC
TTCGGCCGCGCCGCGCGGCGGGTTCCCCTCGCTCCGCCTCGSSCCGCCGSGCGCCGCGGG
GACCTCGCCAGGCGCAGGGCCGCCGCCGACGGCGNGCGRAGGGGTAAGAGAGGCGCTGTC
CGAGGTGGCCTCGGAGAACGACAAGCTCGAGGCGACCGTGTSGAACCTGGAGAAGCTGGA
GAAGATCTTCGCGGAGGAGGACATCGCCGAGTTYTTCGAAAACCGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14265#1      ------------------------------------------------------------
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      GGCACGAGCGCAGATCGTGCGGGAGTTCGAGAACGCCTTCAACTCGCTCACCGGCACCGA 60
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      ------------------------------------------------------------
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      GGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCGCAGGACCTCGCGCAGATCGCGCA 120
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      ----------------------------------------CCACCTCCCGACGA---GAT 17
consensus_14265#4      -----------CGAGCTCCGCCGCGCACCAC-TCC-----CCACCTCCCGACGA---GAT 40
consensus_14265#2      ---ANGATTCCCNNGAGCCGGCGCGAANAAG-TCCGGGTCCAGACCCGCATCGACC-GGA 55
consensus_14265#0      GCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGGGTCAAGACCCGCATCGACCCGGA 180
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GGCCACCCTCCGCCTCACC--TCCGTCACCCTCCGCCCCGCCGCCTCCCCCTCGT-CCG- 73
consensus_14265#4      GGCCACCCTCCGTCTCACC--TCCGTCACCCTCCGNCCCGSCGTCTCCCCCTCGTTCCG- 97
consensus_14265#2      GCTCATCGCCGGCTTCACCA-TCCAGTACGGNCGCGACGGGTCCAGCCTCATCGACATGA 114
consensus_14265#0      GCTCATCGCCGGCTTCACCA-TCCAGTACGGCCGCGACGGGTCCAGCCTCATCGACATGA 239
consensus_14265#3      TGTTTTCATTTGATAAACGAGATCAATATA-TCATGTGGTGTTCCGTTTTAAAAAAAAAA 59
                             *    *    **     *   *    *                           

consensus_14265#1      CCGCCGCGCCGCGGTCCGCCAACTTCGCCCGCG---CCGCGGCGCGCG-GGTTCCCCTCG 129
consensus_14265#4      GCGGCGCGCCGCGTCCCGMCAACTTCGGCCGCG---CCGCG-CG-GCG-GGTTCCCCTCG 151
consensus_14265#2      GCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTCGAGATGCCCGCAGTAACCCTCG 174
consensus_14265#0      GCGTCCGGAAGCAGATCGAGGAGATCACCTCCGANTTCGAGATGCCCGCAGTAACCCTCG 299
consensus_14265#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 119
                                            *                                      

consensus_14265#1      -CTCCGCCTCGCGCCGCCGCGCCGCCGCGGGGACCTCGCCAGG---CGCAGGGCCGCCGC 185
consensus_14265#4      -CTCCGCCTCGSSCCGCCGSGC-GCCGCGGGGACCTCGCCAGG---CGCAGGGCCGCCGC 206
consensus_14265#2      ACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTGCCTTGGCCCTTAGCTCAATTGT 234
consensus_14265#0      ACNTCTGATCGGCATCCACCACCCTCCCNGCGGCGCTGCCTTGGCCCTTAAGTCCTCTCC 359
consensus_14265#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTTTTT----------TCCCTTTT 169
                                                        *                   *      

consensus_14265#1      CGACGCCGCGGCGGAGGGGTACGCGACGGCGCTG-TCCGAGGTGGCCTCGGAG--AACGG 242
consensus_14265#4      CGACGGCGNG-CGRAGGGGTAAGAGA-GGCGCTG-TCCGAGGTGGCCTCGGAG--AACGA 261
consensus_14265#2      CACAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGA 294
consensus_14265#0      TCCTGTTGTCTCTTACTCTTGTGCAAGTGCAACATACATTGCTCTCATGTGATTGTTGAA 419
consensus_14265#3      CTATGAAAGG--GGGAAATTTTTTAAACCCCGGGGAAATTCCCCTTTTAGGGGGGGTAAA 227
                           *              *     *                     *  *         

consensus_14265#1      CACGCTCGAGGCGACCGTG-TCGGACCTGGAGAAGCTGGAG---AAGATCTTCGCGGAG- 297
consensus_14265#4      CAAGCTCGAGGCGACCGTG-TSGAACCTGGAGAAGCTGGAG---AAGATCTTCGCGGAG- 316
consensus_14265#2      TATAATGGAGGAGGCTCAA-ATACATATGACGATCACGACA---ACATTCTTTTCTGCA- 349
consensus_14265#0      TGTTTGGTAAGCATTACTGCTGAAATAATACATAGCTGGATTCCAAAATTTGCACTGTTT 479
consensus_14265#3      TTTAAAACTGGGGAAAAAAAGGGGAAAAACTTTTCCCTGGGG--AAAATTGTTTCCCCCC 285
                                 *             *                   *   *     *     

consensus_14265#1      GAGGCCATCGCCGAGTTCTTCGACAACCCGACGGTGCCGCGCGACGAGAAGGCCCAGCTC 357
consensus_14265#4      GAGGACATCGCCGAGTTYTTCGAAAACCGA------------------------------ 346
consensus_14265#2      TTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTGTAA 409
consensus_14265#0      GATTATCTTGGCCTGCATATTTTTTTTAGCAGAATTTGTAGAGTAGCGTGTGTTGCGTTC 539
consensus_14265#3      AAAATTTCCACAAAAATTAAAACCCGGAACCTAAAAGGGAAAACCCGGGGGGCCCCAAAG 345
                                                                                   

consensus_14265#1      ATCGACGAGATCGCCAAGTCGTCGGAGCTCCAGGCGCACGTCGTCAACTTCCTCAACGTC 417
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      TTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATAGAG 469
consensus_14265#0      ACTAGCTCCATGTCTCGGCCTCATGGGGGAAGTTTTCAATAGATTTGCTCTGCCAAGTTC 599
consensus_14265#3      AGGGCCCCCCCCCCCT--TTTTTGGGGGGCCCCCCC------------------------ 379
                                                                                   

consensus_14265#1      GTGGTGGACAACGGCCGCGCGGGCCTCATGACGCAGATCGTGCGGGAGTTCGAGAACGCC 477
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      TTTGCAGATATGTATAGNAAGCGCCATTGTTTTCAAAAAAAAAAAAAAAAA--------- 520
consensus_14265#0      AGAGTAGAACTGTAGAAGATTGTCTTGTGCGATGGAGCAGAGAAAACAATCATTGAAAGT 659
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      TTCAACTCGCTCACCGGCACCGAGGTGGCCACCGTCACCTCCGTCGTGCAGCTCGAGTCG 537
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      AGTTCATAAGTGTGAGGGCATTAGGGCAAAGTGGCGAAGGAATTTGGCTTTTGTGATCAC 719
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      CAGGACCTCGCGCAGATCGCGCAGCAGGTGCAGAATCTCACCGGCGCGAAGAACGTCCGG 597
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      ATGAGGCTGCTCTTATAATCTGCAAACCTGTCAATCTAATATGCAAATGCAGTTTAATTA 779
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GTCAAGACCCGCATCGACCCGGAGCTCATCGCCGGCTTCACCATCCAGTACGGCCGCGAC 657
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      GTGACAGACTGTTCATCCTTTTGCAGCTCCATTGTCACAGGGAATCTCGAAGGCTTGTCA 839
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GGGTCCAGCCTCATCGACATGAGCGTCCGGAAGCAGATCGAGGAGATCACCTCCGAGTTC 717
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      AGAATGCTGGTCCTCATCCCCTTCAGAACTGAAGATATAATGGAGGAGGCTCAAATACAT 899
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GAGATGCCCGCAGTAACCCTCGACGTCTGATCGGCATCCACCACCCTCCCGGCGGCGCTG 777
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      ATGACGATCACGACAACATTCTTTTCTGCATTTCTTTTCATTTTTTGGCCGGAGCCAATG 959
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      CCTTGGCCCTTAGGGAATCTCGAAGGCTTGTCAAGAATGCTGGTCCTCATCCCCTTCAGA 837
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      TAATTCTCTTTTCTTTCGTTGCCCGGGTAATTTGCTTCAAATACTAAACTATAGCGAGGC 1019
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      ACTGAAGATATAATGGAGGAGGCTCAAATACATATGACGATCACGACAACATTCTTTTCT 897
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      TGCTCCTCCATTATGTACCTGCCGATAGAGTTTGCAGGTATGTATAGAAAGTGCCATTGT 1079
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GCATTTCTTTTCATTTTTTGGCCGGAGCCAATGTAATTCTCTTTTCTTTCGTTGCCCTTG 957
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      TTTCATCTGATAAACGAGATCAATATATCATGTGGT------------------------ 1115
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      TAATTTGCTTCAAATACTAAACTATAGCGAGGCTGCTCCTCCATTATGTACCTGCCGATA 1017
consensus_14265#4      ------------------------------------------------------------
consensus_14265#2      ------------------------------------------------------------
consensus_14265#0      ------------------------------------------------------------
consensus_14265#3      ------------------------------------------------------------
                                                                                   

consensus_14265#1      GAAAGGGCAGATATGTATAGAAAGTGCCATTGTTTTCAAAAAAAAG 1063
consensus_14265#4      ----------------------------------------------
consensus_14265#2      ----------------------------------------------
consensus_14265#0      ----------------------------------------------
consensus_14265#3      ----------------------------------------------