cluster # 14266

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Oryza sativa
cluster # 14266 cluster # 14266 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14266#0 length = 1889 sequences # 13

consensus_14266#1 length = 1044 sequences # 2

consensusID : consensus_14266#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1889
fasta sequence

                              [AATTTTCCCAGGAATCTGAGCGGCCGCAAGGCGTCACGCGAAACCCGTCCAACCCAACTCCACTCCATCCTCTGCAGCCGCAGTTGTGACGGAGACTCCAAGGCCATCACCATCCACCCGCTCTCCTCCTCCTCCTCCTCCGCTTGATCCCTCCATCTCCTCGATCGATCTCCACACTCCACTGCGCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATGGCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCCAAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGGAAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTCCTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTATCTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCTGATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACA-TTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT-GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA-CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAAACTAATTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK072426             [AATTTTCCCAGGAATCTGAGCGGCCGCAAGGCGTCACGCGAAACCCGTCCAACCCAACTCCACTCCATCCTCTGCAGCCGCAGTTGTGACGGAGACTCCAAGGCCATCACCATCCACCCGCTCTCCTCCTCCTCCTCCTCCGCTTGATCCCTCCATCTCCTCGATCGATCTCCACACTCCACTGCGCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATGGCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCCAAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGGAAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTCCTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTATCTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCTGATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTG  ATCATCTCCCACTTGGGGCAATCACAAGAACA TTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCA                                          ]
[+] EMBL CF329392             [                                           CCCGTCCAACCCAACTCCACTCCATCCTCTGCAGCCGCAGTTGTGACGGAGACTCCAAGGCCATCACCATCCACCCGCTCTCCTCCTCCTCCTCCTCCGCTTGATCCCTCCATCTCCTCGATCGATCTCCACACTCCACTGCGCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATGGCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCCAAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGGAAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCAATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK105059             [                                                                                                                                                                                         GCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATGGCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCCAAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGGAAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTCCTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTATCTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCTGATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACA TTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCA                                          ]
[+] EMBL BP185003             [                                                                                                                                                                                                                                                                                             acgaggGCGCGCTCCAAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGGAAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTCCTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTATCTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCTGATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACATTTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AY157306             [                                                                                                                                                                                                                                                                                                                                                                                        TCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTGCCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAATGATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTCCTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTATCTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCTGATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACA TTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGA                                                                                                                                                                                                                                                                               ]
[-] EMBL CB662922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAA                                         ]
[+] EMBL BF430531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCGCGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGCTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAAACT                                      ]
[+] EMBL AU065716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCAT GGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCG NTCCTTCCATAACGTTAGCTAGACGGGG                                                                                                                                                                                                                                                                             ]
[+] EMBL CB483487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTATTCATGGGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAA CCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCTAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCCTGAACAAAACTCAGAGTGATAATACGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGAC                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF329393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAACCCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCGTATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAAACTAATTCCAATTTTAAAAAAA                   ]
[-] EMBL CA756616             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGCTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAAACTAATTCCA                               ]
[+] EMBL AU030484             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGNGGATTCAGGTCNCTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCNGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTNTGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGNCTNGCNNTAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCATCATCGACTCCTTCCATAACGTTAGCTAGACGNGGATTCAGGTCNCTGCTATTGTGGTTAANCCTTCAATATGCTGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCNGGATTGTATATCCGGCGCTACGTAATTTGGNGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGNCTNGCNATAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14266#0
AATTTTCCCAGGAATCTGAGCGGCCGCAAGGCGTCACGCGAAACCCGTCCAACCCAACTC
CACTCCATCCTCTGCAGCCGCAGTTGTGACGGAGACTCCAAGGCCATCACCATCCACCCG
CTCTCCTCCTCCTCCTCCTCCGCTTGATCCCTCCATCTCCTCGATCGATCTCCACACTCC
ACTGCGCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATG
GCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCC
AAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGG
AAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTG
CCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAAT
GATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTC
CTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTAT
CTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCT
GATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGG
TCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATA
TCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCAAAGGTACCTTGGTCA
GAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGAC
ATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACT
GGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAA
CACATGCCTTTCTTTGATGTTGCATATCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGAT
GCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTAT
AGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACA
CCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCG
AATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAACCATGTTT
GGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAG
CTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGG
CAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGAC
AAATGGCACATATACATGACAAAGGATGGGAGAATTTCGTTGGCTGGATTGTCCCTGGCT
AAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTCCATAACGTTAGCTAGACGAGG
ATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGCTGGGATTTTTGGTTCCTTCCA
GCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACGTAATTTGGAGATAATAATGAA
TTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAATGTACACTGGCACTATGTTAG
AAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCAATAAGCCAAACTAATTCCAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14266#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1044
fasta sequence

                              [CTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGTGAAATGTTCTCACTTTATTATTTCGTTTTTCTCTGCATGAAAACAAATATCTTACTGACTAGCAAATATTTCTCTGCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGNTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTCGTTGGCTGGATTGTCCTGGCTAATGCGAGTNCTACTGCGCCATCATCGCTCCTTCNATACGTAGCTAACGAGATTCAGNCCTGCTATGTGGTANCCTCCATAGCTGGNTTGGTCCTCCACTAAGTCTANCA]

[+] EMBL CB662921             [CTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCAAAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGTGAAATGTTCTCACTTTATTATTTCGTTTTTCTCTGCATGAAAACAAATATCTTACTGACTAGCAAATATTTCTCTGCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGNTCTCC                                                                                                                                                                                                                  ]
[+] EMBL AU065721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTTGTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTCGTTGGCTGGATTGTCCTGGCTAATGCGAGTNCTACTGCGCCATCATCGCTCCTTCNATACGTAGCTAACGAGATTCAGNCCTGCTATGTGGTANCCTCCATAGCTGGNTTGGTCCTCCACTAAGTCTANCA]




>consensus_14266#1
CTCTCAGGAACCGGGTCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAA
GCAAAAGTACTGATATCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCA
AAGGTACCTTGGTCAGAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAG
GGAATGATAGCTGACATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGC
GCTCACAACCCAACTGGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTC
ATTCAAGAGAAGAAACACATGCCTTTCTTTGATGTTGCATATCAGGTGAAATGTTCTCAC
TTTATTATTTCGTTTTTCTCTGCATGAAAACAAATATCTTACTGACTAGCAAATATTTCT
CTGCAGGGTTTTGCCAGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTT
CAACGGGGACTGGAAGTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCA
GAAAGAATTGGAGCAATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAG
AGCCAGCTGAAACGATTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGG
ATAGTTGCCAACGTTGTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAA
GAAATGGCAGGGCGTATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAG
GACGACAGTGGCAAGGACTGGTCTTTCATTCTGAGGCAGATAGGCATGNTCTCCTACACG
GGCTTGAACAAAACTCAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAG
GATGGGAGAATTCGTTGGCTGGATTGTCCTGGCTAATGCGAGTNCTACTGCGCCATCATC
GCTCCTTCNATACGTAGCTAACGAGATTCAGNCCTGCTATGTGGTANCCTCCATAGCTGG
NTTGGTCCTCCACTAAGTCTANCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14266#0      AATTTTCCCAGGAATCTGAGCGGCCGCAAGGCGTCACGCGAAACCCGTCCAACCCAACTC 60
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      CACTCCATCCTCTGCAGCCGCAGTTGTGACGGAGACTCCAAGGCCATCACCATCCACCCG 120
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      CTCTCCTCCTCCTCCTCCTCCGCTTGATCCCTCCATCTCCTCGATCGATCTCCACACTCC 180
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      ACTGCGCACTGCACCAGCAACGCCCCCCCCTGATCCCTCTCCACGGCTGCACCGGAGATG 240
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      GCTTCCGCCCCCTTCGCCGTCTCCTCCTCACCGGCGGCTTCCGCCGTGGCCGCGCGCTCC 300
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      AAGGTGTTGCGAGGAGGGAGGAGCGAGGCGAGGACTGGATGCCGCCTGGGGATCACGAGG 360
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      AAGAATTTTGGACGTGTCATGATGGCCCTTGCAGTAGATGTCTCTCGTTTTGAAGGAGTG 420
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      CCGATGGCCCCTCCAGACCCAATTCTCGGGGTTTCAGAAGCATTTAAGGCAGATCAAAAT 480
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      GATCTGAAGCTCAACCTTGGTGTTGGTGCCTATAGAACAGAAGAGTTACAGCCTTATGTC 540
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      CTCAATGTGGTCAAGAAGGCTGAAACTCTTATGTTGGAGAAAGGAGAAAACAAGGAGTAT 600
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      CTGCCAATTGAAGGCTTAGCTGCATTTAACAAAGCAACTGCAGAACTATTGTTTGGAGCT 660
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      GATAATCCAGTACTCAAGCAAGGACGTGTTGCTACTCTTCAGTCTCTCTCAGGAACCGGG 720
consensus_14266#1      ---------------------------------------------CTCTCAGGAACCGGG 15
                                                                    ***************

consensus_14266#0      TCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATA 780
consensus_14266#1      TCGCTGCGCCTTGCTGCAGCATTTATACAAAGATATTTCCCTGAAGCAAAAGTACTGATA 75
                       ************************************************************

consensus_14266#0      TCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCAAAGGTACCTTGGTCA 840
consensus_14266#1      TCATCTCCCACTTGGGGCAATCACAAGAACATTTTCAATGATGCAAAGGTACCTTGGTCA 135
                       ************************************************************

consensus_14266#0      GAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGAC 900
consensus_14266#1      GAGTACCGTTATTACGACCCCAAGACTGTTGGCTTGGATTTTGAGGGAATGATAGCTGAC 195
                       ************************************************************

consensus_14266#0      ATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACT 960
consensus_14266#1      ATACAGGCTGCCCCAGATGGATCTTTTGTTCTGCTGCATGGTTGCGCTCACAACCCAACT 255
                       ************************************************************

consensus_14266#0      GGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAA 1020
consensus_14266#1      GGAATAGACCCAACTCCGGAACAATGGGAGAAAATTGCAGATGTCATTCAAGAGAAGAAA 315
                       ************************************************************

consensus_14266#0      CACATGCCTTTCTTTGATGTTGCATATCAGG----------------------------- 1051
consensus_14266#1      CACATGCCTTTCTTTGATGTTGCATATCAGGTGAAATGTTCTCACTTTATTATTTCGTTT 375
                       *******************************                             

consensus_14266#0      ----------------------------------------------------GTTTTGCC 1059
consensus_14266#1      TTCTCTGCATGAAAACAAATATCTTACTGACTAGCAAATATTTCTCTGCAGGGTTTTGCC 435
                                                                           ********

consensus_14266#0      AGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAA 1119
consensus_14266#1      AGTGGAAGCCTTGATGAAGATGCATCTTCTGTCAGGCTTTTTGTTCAACGGGGACTGGAA 495
                       ************************************************************

consensus_14266#0      GTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCA 1179
consensus_14266#1      GTGTTTGTTGCGCAGTCTTATAGCAAAAACCTTGGTTTATATGCAGAAAGAATTGGAGCA 555
                       ************************************************************

consensus_14266#0      ATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGA 1239
consensus_14266#1      ATAAATGTTGTCTGCTCAACACCTGAAGTCGCAAACAGGGTGAAGAGCCAGCTGAAACGA 615
                       ************************************************************

consensus_14266#0      TTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTT 1299
consensus_14266#1      TTGGCACGGCCCATGTATTCGAATCCCCCTATTCATGGTGCTAGGATAGTTGCCAACGTT 675
                       ************************************************************

consensus_14266#0      GTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGT 1359
consensus_14266#1      GTTGGGGATCCAACCATGTTTGGTGAATGGAAACAGGAGATGGAAGAAATGGCAGGGCGT 735
                       ************************************************************

consensus_14266#0      ATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAG 1419
consensus_14266#1      ATCAAGAATGTAAGACAGAAGCTTTATGATAGTTTGTCTGCAAAGGACGACAGTGGCAAG 795
                       ************************************************************

consensus_14266#0      GACTGGTCTTTCATTCTGAGGCAGATAGGCATGTTCTCCTACACGGGCTTGAACAAAACT 1479
consensus_14266#1      GACTGGTCTTTCATTCTGAGGCAGATAGGCATGNTCTCCTACACGGGCTTGAACAAAACT 855
                       ********************************* **************************

consensus_14266#0      CAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATTTCG 1539
consensus_14266#1      CAGAGTGATAATATGACCGACAAATGGCACATATACATGACAAAGGATGGGAGAATT-CG 914
                       ********************************************************* **

consensus_14266#0      TTGGCTGGATTGTCCCTGGCTAAATGCGAGTACCTAGCTGACGCCATCATCGACTCCTTC 1599
consensus_14266#1      TTGGCTGGATTGTCC-TGGCTAA-TGCGAGTNCT--ACTG-CGCCATCATCG-CTCCTTC 968
                       *************** ******* ******* *    *** *********** *******

consensus_14266#0      CATAACGTTAGCTAGACGAGGATTCAGGTCACTGCTATTGTGGTTAATCCTTCAATATGC 1659
consensus_14266#1      NATA-CGT-AGCTA-ACGAG-ATTCAGNCC--TGCTAT-GTGGTANCCTCCATAGCTGGN 1021
                        *** *** ***** ***** ******  *  ****** *****     *   *    * 

consensus_14266#0      TGGGATTTTTGGTTCCTTCCAGCTTGAGTTCTTAGCCAGGATTGTATATCCGGCGCTACG 1719
consensus_14266#1      TTGG-TCCTCCACTAAGTCTANCA------------------------------------ 1044
                       * ** *  *    *   ** * *                                     

consensus_14266#0      TAATTTGGAGATAATAATGAATTTTGTCTGTGCAACAAACTTTGCATATGCTTTGTCGAA 1779
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      TGTACACTGGCACTATGTTAGAAGCTTGAAATATCGAATTGAATAATAATGAGACTAGCA 1839
consensus_14266#1      ------------------------------------------------------------
                                                                                   

consensus_14266#0      ATAAGCCAAACTAATTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1889
consensus_14266#1      --------------------------------------------------