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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2870 fasta sequence
[CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTCCTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGCCTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGATGGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCAGAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGTGATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAGCGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATTAAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTTCCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAACAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAACAATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGTTTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGAAAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACTTATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCACTGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACGCCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTACCTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTCCCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGACCATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATTCCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC----CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC]
[+] EMBL AK109819 [CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTCCTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGCCTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGATGGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCAGAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGTGATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAGCGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATTAAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTTCCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAACAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAACAATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGTTTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGAAAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACTTATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCACTGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACGCCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTACCTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTCCCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGACCATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATTCCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT ]
[+] EMBL CA999117 [ attcgGCACGAGGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTA ]
[+] EMBL CA998221 [ GGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTACAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTATAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGCATGCACATAAACAGATACATC ]
[+] EMBL CA998257 [ GGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATA ]
[+] EMBL CA999811 [ GGCTCCTTGCCAGGGAGCGAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTACATTTGC ]
[-] EMBL CA765413 [ AAATTTTTGTATCTAGTATTAGGCATTTAGGCCTC AAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTGATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACATGTAGGGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCCCTTGTCTCGTg ]
[+] EMBL CF297306 [ ttttTACAATGTTCAAAAGCTTCAGCTTTAACGACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAAGTCTTCCTGAATACTCTGCTGTTGCCATGGAC ]
[+] EMBL CF295709 [ tttttTTCAAAAGCTTCATTTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTATTTAACACGAAATGATTCATTTTTTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAAAGCCTGTTTCCAGCGGCAGTTGCAGCGATGAAAATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTTCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTC ]
[-] EMBL AK060135 [ TTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC]
[+] EMBL CF302013 [ tttttTTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATGGAACAGGTAGAGCCCGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCT ]
[-] EMBL AK058893 [ GCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGATATGTTCTCCAACCTGTCTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATT ]
[-] EMBL BI118797 [ TCAGTTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAGCTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCTCCCAGCCAGAAGGCCCTGCTTCACTGCCGTGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTG ]
[-] EMBL CF326727 [ GCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCc ]
[-] EMBL CF295708 [ AATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCA ]
consensusID : consensus_14286#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence
[AGAGGACAAGACAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTAAAAAAAAAAA]
[-] EMBL CA759667 [AGAGGACAAGACAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTAAAAAAAAAAA]
consensusID : consensus_14286#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence
[TTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATGTAGGTTTGCCACTTTTATTTTGCTGTATGATATTATTTTTTAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTGTAAATCAATCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGCTACTAAAAGGAACATGTGATTATAAAGAAATGGCCAGGGTGCAAACGCATTATCAATAAAATTGTGCGTCACAATCACAAAAAAAAAA]
[+] EMBL BM420249 [TTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATGTAGGTTTGCCACTTTTATTTTGCTGTATGATATTATTTTTTAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTGTAAATCAATCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGCTACTAAAAGGAACATGTGATTATAAAGAAATGGCCAGGGTGCAAACGCATTATCAATAAAATTGTGCGTCACAATCACAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14286#0 CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTC 60
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGC 120
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGAT 180
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 GGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCA 240
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 GAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGT 300
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 GATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAG 360
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATT 420
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 AAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTT 480
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAA 540
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAAC 600
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 AATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGT 660
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGA 720
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 AAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACT 780
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCAC 840
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACG 900
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTAC 960
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTC 1020
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGAC 1080
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATT 1140
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCAT 1200
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 -------------------------------------------------TTCTAGGTCAT 11
consensus_14286#0 CGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAA 1260
consensus_14286#1 ----------------------------------------------AGAGGACAAGACAA 14
consensus_14286#2 CGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAA-AA 70
* * * **
consensus_14286#0 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 1320
consensus_14286#1 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 74
consensus_14286#2 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 130
************************************************************
consensus_14286#0 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTA 1380
consensus_14286#1 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTA 134
consensus_14286#2 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTA 190
******************************* ***************************
consensus_14286#0 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 1440
consensus_14286#1 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 194
consensus_14286#2 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 250
************************************************************
consensus_14286#0 CACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTT 1500
consensus_14286#1 CACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTT 254
consensus_14286#2 CACTGATGTGATGATGTAGGTTTGCCACTTTTATT----TTGCTGTATGATATTATTTTT 306
*************** * * ** * * * * ***** * ** * * ***
consensus_14286#0 CTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCAT 1560
consensus_14286#1 CTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCAT 314
consensus_14286#2 TAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTG--TAAATCAA 364
** * ** * *** * ** * * * * * * * * ***
consensus_14286#0 GCAAGTCAGGCAAGGGTATCATTCTTTCAGTGAT-CTACATCCAAGAATCCTGTAGCCTG 1619
consensus_14286#1 GCAAGTCAGGCAAGGGTATCATTCTTTCAGTGAT-CTACATCCAAGAATCCTGTAGCCTG 373
consensus_14286#2 TCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGC-TACTAAAAGGAA 423
** * * * ** ** * *** * ** **** **** * ** *
consensus_14286#0 CAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATC 1679
consensus_14286#1 CAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATC 433
consensus_14286#2 CATGT----GATT----ATAAAGAAATGGCCAGG--GTGCAAACGCATTATCAATAAAAT 473
** ** *** ** **** * **** * * ** *** * ** *
consensus_14286#0 GGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAA 1739
consensus_14286#1 GGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAA 493
consensus_14286#2 TGTGCGTCAC--AATCACAAAAAAAAAA-------------------------------- 499
** ***** * ***** * * * **
consensus_14286#0 TTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAA 1799
consensus_14286#1 TTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAA 553
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 AAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT 1859
consensus_14286#1 AAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT 613
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 ATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATG 1919
consensus_14286#1 ATGTTTTCTTACTAAAAAAAAAAA------------------------------------ 637
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 GTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATG 1979
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 ATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTA 2039
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTT 2099
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCT 2159
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTG 2219
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAA 2279
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAA 2339
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 GATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAA 2399
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTC 2459
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TCCAACCTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCT 2519
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAG 2579
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 AAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTT 2639
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 CTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGG 2699
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGC 2759
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTG 2819
consensus_14286#1 ------------------------------------------------------------
consensus_14286#2 ------------------------------------------------------------
consensus_14286#0 TGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC 2870
consensus_14286#1 ---------------------------------------------------
consensus_14286#2 ---------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||