These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14286#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2870 fasta sequence [CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTCCTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGCCTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGATGGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCAGAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGTGATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAGCGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATTAAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTTCCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAACAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAACAATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGTTTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGAAAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACTTATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCACTGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACGCCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTACCTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTCCCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGACCATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATTCCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC----CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC] [+] EMBL AK109819 [CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTCCTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGCCTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGATGGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCAGAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGTGATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAGCGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATTAAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTTCCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAACAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAACAATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGTTTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGAAAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACTTATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCACTGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACGCCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTACCTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTCCCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGACCATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATTCCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT ] [+] EMBL CA999117 [ attcgGCACGAGGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTA ] [+] EMBL CA998221 [ GGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTACAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTATAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGCATGCACATAAACAGATACATC ] [+] EMBL CA998257 [ GGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATA ] [+] EMBL CA999811 [ GGCTCCTTGCCAGGGAGCGAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTCTGCATGGCGACCTAAGTACATTTGC ] [-] EMBL CA765413 [ AAATTTTTGTATCTAGTATTAGGCATTTAGGCCTC AAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTGATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACATGTAGGGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCCCTTGTCTCGTg ] [+] EMBL CF297306 [ ttttTACAATGTTCAAAAGCTTCAGCTTTAACGACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAAGTCTTCCTGAATACTCTGCTGTTGCCATGGAC ] [+] EMBL CF295709 [ tttttTTCAAAAGCTTCATTTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTATTTAACACGAAATGATTCATTTTTTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAAAGCCTGTTTCCAGCGGCAGTTGCAGCGATGAAAATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTTCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTC ] [-] EMBL AK060135 [ TTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC] [+] EMBL CF302013 [ tttttTTCAAAAGTTATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATGGAACAGGTAGAGCCCGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCT ] [-] EMBL AK058893 [ GCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATGGTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATGATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTACATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTTCCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCTTCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTGTACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGATATGTTCTCCAACCTGTCTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATT ] [-] EMBL BI118797 [ TCAGTTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAACGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAGCTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCTCCCAGCCAGAAGGCCCTGCTTCACTGCCGTGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTG ] [-] EMBL CF326727 [ GCAAACCGCAGGTCGATCTCGGTGCCACCAAGATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTGTGATGCTCTAGCTCc ] [-] EMBL CF295708 [ AATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAATGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTCTCCAAC CTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCTTCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAGAAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTTCTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGGTTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGCTGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCA ] consensusID : consensus_14286#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 637 fasta sequence [AGAGGACAAGACAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTAAAAAAAAAAA] [-] EMBL CA759667 [AGAGGACAAGACAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTTCTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCATGCAAGTCAGGCAAGGGTATCATTCTTTCAGTGATCTACATCCAAGAATCCTGTAGCCTGCAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATCGGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAATTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAAAAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTTATGTTTTCTTACTAAAAAAAAAAA] consensusID : consensus_14286#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [TTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATGTAGGTTTGCCACTTTTATTTTGCTGTATGATATTATTTTTTAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTGTAAATCAATCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGCTACTAAAAGGAACATGTGATTATAAAGAAATGGCCAGGGTGCAAACGCATTATCAATAAAATTGTGCGTCACAATCACAAAAAAAAAA] [+] EMBL BM420249 [TTCTAGGTCATCGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAGGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGGCAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTAAGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAGCACTGATGTGATGATGTAGGTTTGCCACTTTTATTTTGCTGTATGATATTATTTTTTAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTGTAAATCAATCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGCTACTAAAAGGAACATGTGATTATAAAGAAATGGCCAGGGTGCAAACGCATTATCAATAAAATTGTGCGTCACAATCACAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14286#0 CACCTCCCACTCCGGCCGCGGCGGCTGCTCCGGTCGCCGATCTCGCGCTGCGCGGTCCTC 60 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CTCGCCGCCTCCGCCGCGCTCCTCCTCGTCCTCTCCCTCCGCCAGGTCCACCGCGTCGGC 120 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CTCCCACCCCGCGACCACCCGCCCGCCCAGGAACCAAATGAGCAGCTGTGGGGTTCTGAT 180 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 GGTTACGGTTCTCATGCTTGTGTCACACCAACATCTAGATATATGGCTCCAAAAGGGTCA 240 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 GAGCGCTACATGACAGTTAGGAGTAATGGAGGACTCAACCAAATGCGTACTGGAATCTGT 300 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 GATATGGTTGCAGTGGCCCGTTTGGTGAATGCAACACTTGTTATTCCTCAATTAGATAAG 360 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CGATCCTTTTGGCAAGATACCAGTACATTTAAGGACATCTTCAATGAGCCTCGTTTTATT 420 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 AAAGCTCTGGAAGGGGATGTCAGCATTGTGAATGACTTGCCTCAAAGCCTGCAGTCTGTT 480 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CCAAGAGCTCGGAAGCACTTTACTTCATGGTCTGGTGCTAGTTATTATGAGGAGGTGAAA 540 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CAACTTTGGAAGGATCACAAGGTAGTTCACATCCCGAAATCAGATTCACGACTTGCTAAC 600 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 AATGGTCTTCCGATTGATATCCAGAGATTAAGATGCCGCTGTCTTTACCAAGCACTGCGT 660 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TTTTCAGATCCAATTGAGAACCTTGGAAAGAAGCTTTTGGAGCGTCTAAGATCACGTGGA 720 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 AAATTTATTGCTCTTCATCTCCGATATGAAAAAGATATGCTAGCATTCACGGGATGCACT 780 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TATGGTCTGAGTGAATCGGAAGCAGATGAGTTAAGAATTATGAGGGAGAAAACAAGCCAC 840 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TGGAAATTGAAGGACATAAACTCAACTGAACAGAGATCTGGAGGTAACTGTCCACTAACG 900 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CCTGAGGAGGTGGGGATTTTTCTGCGAGCCATGGGATATCCTGAATCCACATGGATCTAC 960 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CTTGCAGCTGGTGAAATTTATGGCGGTGATAAGTATATATCAAAATTGAGATCATACTTC 1020 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CCGAACTTGGTTAGCAAGGAAGTGTTAGCAACAAAAGAAGAGCTTGGTAAATTTAACGAC 1080 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CATGCTTCTCAAGTTGCAGCCCTTGATTACATAGTTTCAGTTGAAAGTGACGTGTTTATT 1140 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CCATCACATTCTGGCAATATGGCAAGAGCTGTTGAGGGACATCGTCGATTTCTAGGTCAT 1200 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 -------------------------------------------------TTCTAGGTCAT 11 consensus_14286#0 CGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAAAAA 1260 consensus_14286#1 ----------------------------------------------AGAGGACAAGACAA 14 consensus_14286#2 CGTAAGACTGTCACTCCTGACAGGAGAGGATTGGTGGAACTCTTTGATTTACTACAA-AA 70 * * * ** consensus_14286#0 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 1320 consensus_14286#1 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 74 consensus_14286#2 GGGGAACTTATGGAAGGTCCAAAGTTTTCCTCACTTGTTACTGAGATGCATAAAAACAGG 130 ************************************************************ consensus_14286#0 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTA 1380 consensus_14286#1 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTGNCCAGGGAGCAAGGGCAGAGCACGTCTA 134 consensus_14286#2 CAAGGAGCTCCAAGGAAGAGATATGGCTCCTTGCCAGGGAGCAAGGGCAGAGCACGTCTA 190 ******************************* *************************** consensus_14286#0 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 1440 consensus_14286#1 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 194 consensus_14286#2 AGGACCGAGGAATCCTTTTATGAAAACCCATTTCCCGAGTGCATCTGCCTGAATGGAAAG 250 ************************************************************ consensus_14286#0 CACTGATGTGATGATCTCTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTT 1500 consensus_14286#1 CACTGATGTGATGATCTTTGCATGGCGACCTAAGTCCATTTGCTCTCTGTATTGGTGTTT 254 consensus_14286#2 CACTGATGTGATGATGTAGGTTTGCCACTTTTATT----TTGCTGTATGATATTATTTTT 306 *************** * * ** * * * * ***** * ** * * *** consensus_14286#0 CTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCAT 1560 consensus_14286#1 CTGTCGACGAATGGAGCTCCAGTGACGCATCAGAATTACACTGGTACTCGACTCAGTCAT 314 consensus_14286#2 TAGTTAGGAGGTAGAATACTGTTGATTAAACAAGTATGAAGTAATTCCTG--TAAATCAA 364 ** * ** * *** * ** * * * * * * * * *** consensus_14286#0 GCAAGTCAGGCAAGGGTATCATTCTTTCAGTGAT-CTACATCCAAGAATCCTGTAGCCTG 1619 consensus_14286#1 GCAAGTCAGGCAAGGGTATCATTCTTTCAGTGAT-CTACATCCAAGAATCCTGTAGCCTG 373 consensus_14286#2 TCATTGCTGCATACACTACATTTATCTCATTAATTCTACTGGCAAGC-TACTAAAAGGAA 423 ** * * * ** ** * *** * ** **** **** * ** * consensus_14286#0 CAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATC 1679 consensus_14286#1 CAGGTCCAGAATTCAAGATGGGAAAATTGGCAGGTAGAGGGAAGAAATTGTACATTCATC 433 consensus_14286#2 CATGT----GATT----ATAAAGAAATGGCCAGG--GTGCAAACGCATTATCAATAAAAT 473 ** ** *** ** **** * **** * * ** *** * ** * consensus_14286#0 GGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAA 1739 consensus_14286#1 GGTTTGTCACATAGTCACAGAGACAGAAATTGCAAAGGATGTGTGATATGTGTGTCTGAA 493 consensus_14286#2 TGTGCGTCAC--AATCACAAAAAAAAAA-------------------------------- 499 ** ***** * ***** * * * ** consensus_14286#0 TTTTTAGGTTCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAA 1799 consensus_14286#1 TTTTTAGGTCCCTTAGATCTAGAAAATTTTGTATCTAGTATTAGGCATTTAGGCCTCAAA 553 consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 AAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT 1859 consensus_14286#1 AAGGGAAGTTTACGTACAATGTTCAAAAGCTTCAGCTTTAACAACTCATATTCAAAAGTT 613 consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 ATGTTTTCTTACTCATTGCCCCTCTGCAGTCTGTATAATAGCACCTCATTTTCTCTAATG 1919 consensus_14286#1 ATGTTTTCTTACTAAAAAAAAAAA------------------------------------ 637 consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 GTATGCACATAAACAGATACATCGTGAGCAATTTATTTAAACCCTAGACAACACGAAATG 1979 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 ATTCAGCTATTTGCTTCAGGTCATTGTAATTCCTCTTCCATTGTAGCCCATTTGCAGTTA 2039 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CATTGAACAGGTAGAGCCTGTTTCCAGCGGCAGTTGCAGTGATGAAGATATGAGGTGGTT 2099 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CCAGCTCAAACTGGTAGTAAGTTCTTCCTGAATACTCTGCTGTTGCCATGGACAAAACCT 2159 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TCCCTTCAACATTTTCACCGATCACCTCTGGTCCGAAGGCGTCGATCACCTTCTCCGGTG 2219 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TACCGATCTTTTCAATTGTCGCATCGTCGAGTTCTGCAAACCTGCGAACCGGTGCTACAA 2279 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CGACGAACAAACGTCCCTGCTTGGAATTCGCAAACCGCAGGTCGATCTCGGTGCCACCAA 2339 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 GATCAGCAATCGACACCGGGACCTCTTCCCAGCCATCACGAACTTTGAAGCTGTAGGGAA 2399 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TGATTGGGCTCCATCCAACTCCATGTCCACCGGACTTGTCGTCTGGCCTACGGTATGTTC 2459 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TCCAACCTTTTTCATCAGGGTCAGAGAGCCCAGGGATCCGCCCAGCCAGAAGGCCCTGCT 2519 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TCACTGCCATGCTCTCACCTGCAAAACCAAACACTGAAACTCCACAGGCAGCAGCAGCAG 2579 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 AAGCCATTGCATGCCTCCTCCCCATCAAGGAGGCTACACCATCCTCCTCCTCATGTGCTT 2639 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 CTGACAGATTGGGCCCACTGCTGCACCTAACAGCAGCTGCTGCTGATGCTCTGCCCTTGG 2699 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TTGCAGGTACCAGCTGCTTTGTGAGGAACAGGGATGAGCTTGGCAAGAACAGCACTGAGC 2759 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TGTTCATCATCTCTGCAAGAAGCATGGATAGTTTATTGGGAGCAAGTTCTTCTTTCTCTG 2819 consensus_14286#1 ------------------------------------------------------------ consensus_14286#2 ------------------------------------------------------------ consensus_14286#0 TGATGCTCTAGCTCTGGCTCTATGATGTTTCTTGAATAATTTTTTTGCTTC 2870 consensus_14286#1 --------------------------------------------------- consensus_14286#2 --------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||