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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14292#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2175 fasta sequence
[CTTCACCTAGCTGCTGCTGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGCTCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCAGTGCCCGCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAA---------GGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTAT-GACATC-GCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACA-TCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAA-CAGGATGATCAGTCACAAAGCT-CCAACAACAGCTGCGGCTCCATT-CCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCT-CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGATTT-GGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAACAATATAAGTTTTTGTAAAAAAAACCATAAAAAAAAA]
[+] EMBL AK111891 [CTTCACCTAGCTGCTGCTGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGCTCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCAGTGCCCGCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTAT GACATC GCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACA TCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAA CAGGATGATCAGTCACAAAGCT CCAACAACAGCTGCGGCTCCATT CCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCT CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGATTT GGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTAC ]
[+] EMBL AY062179 [ TGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGCTCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAGACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGCTTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCGGTGCCCGCGCTGTTGCCGGCGGCTGCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCGCCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGCGGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGCCGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAA GGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTAT GACATC GCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACA TCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAA CAGGATGATCAGTCACAAAGCT CCAACAACAGCTGCGGCTCCATT CCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCT CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGATTT GGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAACAATATAAGTTTTTGTAAAAAAAA ]
[+] EMBL AU085826 [ TGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGCTCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCGCACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGCGATA CCGGGGCGGCTCCGCCGCGAAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCG TTGCCCGCCGGTCCAGACGACGGGGCCGANGGCCGCCAAGCTGTACGAGTCGGAG TCAA TTTCTCGCCGCCGGg ]
[+] EMBL OSC103481 [ TATCTGCTACTAGTAGCTCGCAGAAAAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCGCACCACTATNCATGGCTCAACTTCTCCCTCGCCCACCACTGTAAAATGGAGGAGGAGGAGAGGGGCGCGGCGGCCGAGCTGGCCGGAATTANCGGGGCGGCTCCGCCG NAAAACTGGAGGACTTCCTCGGCGGCGGCTGCAACGGGGGATNAAGCGGTGG ]
[+] EMBL C97438 [ A GGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTNCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTNAGGAGGAAGCTGCAGAAGCTTATNGACATCAGCGGCGATCAAGTTCCngtt ]
[+] EMBL CF307104 [ GGCACTGAGGAGGAAGCTGCAGAAGCTTAT GACATC GCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAGCGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGTATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTCAGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACA TCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAA CAGGATGATCAGTCACAAAGCT CCAACAACAGCTGCGGCTCCATT CCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCT CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGA ]
[+] EMBL CF327398 [ TGCCAATGGCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAACA TCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAA CAGGATGATCAGTCACAAAGCT CCAACAACAGCTGCGGCTCCATT CCGTTTGCAGCACCCATAGCTTTCAGTGGGTCATATGAAAGCT CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACGCCAATCTTTGGGATGGAATGATTTGGGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTACGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCC ]
[+] EMBL AU100727 [ AGCAACATTCAGCACCAGCATCAGCAGGAGCAGCAGCAAGNTCAACCAGGATGATCAGTCACAAAGCTCCCAACAACAGCTGCGGCTCCATTCCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCT CCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCNTTTCAGACACCAATCTTTGGGATGGAATGATTT GGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAaaaa ]
[+] EMBL AU085827 [ GCTCCATT CCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATGAAAGCTCCCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGACACCAATCTTTGGGATGGAATGATTT GGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAAGAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAAaa ]
[+] EMBL AK059064 [ ACAACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTA ]
[-] EMBL CF327399 [ AAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTACGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAACAATATAAGTTTTTGTAACATTTTCCATAAAAAAAAA]
[+] EMBL AU166949 [ GTAGTAGTGGTATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGACAGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTTTTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTGAGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAGTGCCATGATAGCTTAGCCCATGTNCAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAACAATATAAGTTTTTGTAAAAAAAA ]
[+] EMBL CA757452 [ CAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCTTCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTCCCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAAAAAaaaa ]
consensusID : consensus_14292#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 450 fasta sequence
[CCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAA]
[+] EMBL CF324329 [CCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAA]
[+] EMBL CF324499 [CCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCGGCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTTCCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTTGTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCTCTCGTGGTGCTTCTATATACAGGGGTGTTACAAGACATCACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCAACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGG ]
consensusID : consensus_14292#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence
[TGATGCCATACTTTGTTAAGTACAATTAGCTAATTCAAATATGTTTCATGTGACATTACTATTCAGCCATTAGTAATTTACAGGTGGTGTTGATTTTACTTCAAGTACCTAAATAAAATTGACAATAACGCATCGTTCTTCTGCATATGTGTGGTGTTCAACAGCTGATTGTTGCTTGCTTCCTTCTTTCAGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGTTCCGTCGAGTTCCGCCGACGCCATCGCCGCCACCGANGNGACCACAACGGCNGTCGGGCAACCGTCGACG]
[+] EMBL C26446 [TGATGCCATACTTTGTTAAGTACAATTAGCTAATTCAAATATGTTTCATGTGACATTACTATTCAGCCATTAGTAATTTACAGGTGGTGTTGATTTTACTTCAAGTACCTAAATAAAATTGACAATAACGCATCGTTCTTCTGCATATGTGTGGTGTTCAACAGCTGATTGTTGCTTGCTTCCTTCTTTCAGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACATCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATAACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCACCAAGGCCGGCCTAGAGCTCGTTCCGTCGAGTTCCGCCGACGCCATCGCCGCCACCGANGNGACCACAACGGCNGTCGGGCAACCGTCGACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14292#0 CTTCACCTAGCTGCTGCTGCTGCTTCTTCTTCTTCTATCTGCTACTAGTAGCTCGCAGAA 60
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AAATACTCGCCTCGATCGACAAGCTCTCGTTGTTACCTTACCATGGACATGGACACCTCG 120
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CACCACTATCCATGGCTCAACTTCTCCCTCGCCCACCACTGTGAAATGGAGGAGGAGGAG 180
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AGGGGCGCGGCGGCCGAGCTGGCCGCGATAGCCGGGGCGGCTCCGCCGCCGAAACTGGAG 240
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GACTTCCTCGGCGGCGGCTGCAACGGGGGATCAAGCGGTGGCGCTTGCCCGCCGGTCCAG 300
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 ACGACGGCGCCGACGGCCGCCGAGCTGTACGAGTCGGAGCTCAAGTTTCTCGCCGCCGGC 360
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 TTCCAGCTGAGCGGCGCGGCTGGGGCGGCGCCGCCAGTGCCCGCGCTGTTGCCGGCGGCT 420
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GCTCTAGAGCAGACCGACGAGACGAAGCAGCTGGCCTTGCCGCCGCAGGCCGCGGTGGCG 480
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CCGCCGCCGGAGCAGAAGAAGGCGGTGGACTCGTTCGGGCAGAGAACGTCTATCTACCGC 540
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GGCGTCACACGGCATCGGTGGACCGGAAGGTACGAGGCGCATCTGTGGGATAACAGCTGC 600
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CGGCGTGAGGGCCAGAGCCGCAAGGGACGCCAAGGTGGCTATGATAAGGAGGAGAAAGCG 660
consensus_14292#1 --------------------CCAAGTGTACTTGGGTGGCTATGATAAGGAGGAGAAAGCG 40
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTT 720
consensus_14292#1 GCGAGGGCGTATGATCTTGCCGCGTTGAAGTACTGGGGTCCTAGCACCACAACCAACTTT 100
consensus_14292#2 ----------------------------------------------------TGATGCCA 8
*
consensus_14292#0 CCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTT 780
consensus_14292#1 CCGGTTGCCGAGTACGAAAAGGAGCTTGAGGAGATGAAGCATATGACACGCCAGGAGTTT 160
consensus_14292#2 TACTTTGTTAAGTACAATTAGCTAATTCAA-ATATGTTTCATGTGACATTACTA----TT 63
*** ***** * ** ** * * *** *** ***** * **
consensus_14292#0 GTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCT-CTCGTGGTGCTTCTATATACAGGGG 839
consensus_14292#1 GTAGCTTCACTTAGGAGGAAGAGCAGTGGATTCT-CTCGTGGTGCTTCTATATACAGGGG 219
consensus_14292#2 CAGCCATTAGTAATTTACAGGTGGTGTTGATTTTACTTCAAGTACCTAAATAAAATTGAC 123
* * * * * * * * ** **** * ** ** * * *** * *
consensus_14292#0 TGTTACAAGACAT-CACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCA 898
consensus_14292#1 TGTTACAAGACAT-CACCAGCATGGGCGATGGCAAGCAAGGATCGGAAGAGTGGCTGGCA 278
consensus_14292#2 AATAACGCATCGTTCTTCTGCATATGTG-TGGTGTTCAACAGCTG--ATTGTTGCTTGC- 179
* ** * * * * **** * * *** *** * * ** *** **
consensus_14292#0 ACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACA 958
consensus_14292#1 ACAAGGATCTCTACCTCGGAACATTCGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACA 338
consensus_14292#2 -------TTCCTTCTT-------TCAGGCACTGAGGAGGAAGCTGCAGAAGCTTATGACA 225
* ** * * * **********************************
consensus_14292#0 TCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATA 1018
consensus_14292#1 TCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATA 398
consensus_14292#2 TCGCGGCGATCAAGTTCCGTGGCCTGAATGCTGTCACCAACTTTGAGATCGGCCGGTATA 285
************************************************************
consensus_14292#0 ACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCA 1078
consensus_14292#1 ACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAA-------- 450
consensus_14292#2 ACGTGGAGAGCATAATCAGTAGCAACCTTCCAATCGGGAGCATGGCCGGCAACCGGAGCA 345
****************************************************
consensus_14292#0 CCAAGGCCGGCCTAGAGCTCGCTCCGTCGAGCTCCGCCGACGCCATCGCCGCCACCGAAG 1138
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 CCAAGGCCGGCCTAGAGCTCGTTCCGTCGAGTTCCGCCGACGCCATCGCCGCCACCGANG 405
consensus_14292#0 CGAACCACACCGGCGTCGCGCCACCGTCGACGCTTGCGTTCACAGCTCTTCCAATGAAGT 1198
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 NGACCACAACGGCNGTCGGGCAACCGTCGACG---------------------------- 437
consensus_14292#0 ATGATCAGGCAGATTACCTGTCATACCTCGCATTGCAGCATCACCAGCAAGGAAACCTTC 1258
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AGGGGCTAGGCTTCGGTCTCTACAGCTCAGGTGTAAACCTGGATTTCGCAAATGCCAATG 1318
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GCAATGGAGCCATGTCAAATTGCTACACCAATGTCTCATTACATGAGCAGCAGCAGCAAC 1378
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 ATCAGCACCAGCATCAGCAGGAGCAGCAGCAAGATCAACAGGATGATCAGTCACAAAGCT 1438
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CCAACAACAGCTGCGGCTCCATTCCGTTTGCAACACCCATAGCTTTCAGTGGGTCATATG 1498
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AAAGCTCCATGACAGCAGCAGGCACCTTTGGATACTACCCAAATGTTGCAGCCTTTCAGA 1558
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CACCAATCTTTGGGATGGAATGATTTGGGGAGGTGGCACTTTGCAGGCAAAAAGGATGAA 1618
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 GAGCCTGATCCCTGATCAGAGGTGATGAGGATCAAGACTGACATAGTTCATTCTCACACA 1678
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 ACAACAACAACAACAAACATAAAGAGCAGGGGAAAAGAGAGGTAATGTAGTAGTAGTGGT 1738
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 ATGATGATAAAGTATGATGCAAACATAGTAGGAAGCAGTATGCAGGAGAGAGATACTGAC 1798
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AGGTCAGAGACAGGAGGAGAAGACTCTGCTAACAAAACGATGCAGCGCAAGCATATTGTT 1858
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 TTATTTTACTGCCCTTTTACCCTTTTGTAGCTTTGTTTTCTTGTGCTTTTGTCATCGCTG 1918
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AGCTTTGTTTGCCGCTCAGCTTCTTTTGAGCTTTTCTTTCTACTGACATGATTCTGCAAG 1978
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 TGCCATGATAGCTTAGCCCATGTACAATGGAAGCAGGGACGTCTCTTTGTAGCTTTTGCT 2038
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 TCTTTTCTTTTGTTAGATCGCCTTTGGTAGCGGCCCCTGTTTACTCAAGAAGTTGCTCTC 2098
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 CCTCCACAAGTATACAATGAAATGTACTGCAGGAACTAAACAATATAAGTTTTTGTAAAA 2158
consensus_14292#1 ------------------------------------------------------------
consensus_14292#2 ------------------------------------------------------------
consensus_14292#0 AAAACCATAAAAAAAAA 2175
consensus_14292#1 -----------------
consensus_14292#2 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||