cluster # 14300

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Oryza sativa
cluster # 14300 cluster # 14300 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14300#0 length = 1769 sequences # 15

consensus_14300#1 length = 738 sequences # 1

consensusID : consensus_14300#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1769
fasta sequence

                              [GCCGGCGATCCGCCGCCATGGGTCGCACGGAGGGCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCACCCTCCCCTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACCGGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCAACCGCCGCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTCGGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGATAGCAAGGGTTCGTCGGAATCCGACTCCGGTGAGTCTGATAGCTTGTCCGATTCCAGCAAATCAGATGATACCCGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGACTCTATGGATAGGAGGAAGAAGAAGAGATC-GCGGAGGCACAAGAAGTCTAAGAGGAGGGGAAGGAGCTCCAGGAGGAAGAAGAGGAAGAGCAATGATACAGCTTCTGAGGGAAGCTCTGAGGAGGAGGCGGTGGCAGCGGCTTCAGCATCAAGCCCTAGCCCCTTGAGGGACAGTAAGAAGAAGAGCCGGAGCTCACGGAGGAAGAGGAGCAAGCAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT-CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA-GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA-GGTTTACAGTGCA-GAGGATAAGAGGGCG-CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA-CAAGGTCA-TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA-TTTGCTACAGCGGATGGCTGAGTAAGGATTTA-TAGCTGTTATACA-ATGAATGATCACCACTATTT-CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTTATCCTACTTGTTCTGTTT]

[+] EMBL CB647942             [GCCGGCGATCCGCCGCCATGGGTCGCACGGAGGGCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCACCCTCCCCTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACCGGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCAACCGCCGCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTCGGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCGTGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCCAAGGTGAGGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BP184666             [                                                                                                                                                                                                                                                                                                                           CGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGATAGCAAGGGTTCGTCGGAATCCGACTCCGGTGAGTCTGATAGCTTGTCCGATTCCAGCAAATCAGATGATACCCGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB641344             [                                                                                                                                                                                                                                                                                                                                                             CGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGATAGCAAGGGTTCGTCGGAATCCGACTCCGGTGAGTCTGATAGCTTGTCCGATTCCAGCAAATCAGATGATACCCGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGACTCTATGGATAGGAGGAAGAAGAAGAGATC GCGGAGGCACAAGAAGTCTAACAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB620567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAGCAAGGCTGACCCTTTATAGGAGGGCTCTTATGATTCCGAGGACTCTATGGATAGGAGGAAGAAGAAGAGATCAGCGGAGGCACAAGAAGTCTAAGAGGAGGGGAAGGAGCTCCAGGAGGAAGAAGAGGAAGAGCAATGATACAGCTTCTGAGGGAAGCTCTGAGGAGGAGGCGGTGGCAGCGGCTTCAGCATCAAGCCCTAGCCCCTTGAGGGACAGTAAGAAGAAGAGCCGGAGCTCACGGAGGAAGAGGAGCAAGCAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAAGACCTTCCCATGATCCA TTTGCTACAGCG                                                                                                                                                                                                                                    ]
[+] EMBL CB620569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGACTCTATGGATAGGAGGAAGAAGAAGAGATC GCGGAGGCACAAGAAGTCTAAGAGGAGGGGAAGGAGCTCCAGGAGGAAGAAGAGGAAGAGCAATGATACAGCTTCTGAGGGAAGCTCTGAGGAGGAGGCGGTGGCAGCGGCTTCAGCATCAAGCCCTAGCCCCTTGAGGGACAGTAAGAAGAAGAGCCGGAGCTCACGGAGGAAGAGGAGCAAGCAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTATTAGCTGTTATACA ATGAATGATCACCACTATTTCCCTTTTCTTTTTATGATCCCTATAGTATAAGTCATGA                                                                                                                                       ]
[-] EMBL CB620568             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGCAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTATTAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTAGTGTTGAGTATTGACTACTTGTGATGCTTATCCTA            ]
[-] EMBL CB620570             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTATTAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTTTTTAGGGTTGAGTATTGACTAC                             ]
[-] EMBL CB647825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGAAAGGCTTATCCTACTTGTTCTGTTT]
[-] EMBL CB681456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ggcacgaggATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCCCAGTACGTACAGCAAGGGAAACGTATCCCCCGACGTGGTGAGGTTGGTTTATTTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCCCCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTCCAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCC CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGCCCTTCCCATGATCCA TTTGTTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCCCCCCTATTT CCTTTTTTTTTTATGATCCCTATAGTATAGGTCATGATCTTTAAGATGCCAGTTAGTGCTGTGGATATTTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGGGATGCTTATCCTACTTGTTag    ]
[+] EMBL CF337528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGAC TGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTA                                                                       ]
[-] EMBL CF318067             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTTAaaaaa            ]
[+] EMBL BP184948             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      acgaggCTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTAC                             ]
[+] EMBL CB681455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACCTGCAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACTACGTGGAGAGGTTGGTCTATCTGCAGATGATATT CAAAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAAGCACCA CAGGATGAATGCTATCCGTATTAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGATGAGAAGTCGAAGCGAGAGCA CAAGGTCC TGGCTGATTTGCAGCGCTTAATGC AAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTA TAGCTGTTATACA ATGAATGATCACAACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTATAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTT                  ]
[+] EMBL CA767160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATT CAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACCA GAGGATGAATGCTATCCGTATAAGGAAGGAAAACCA GGTTTACAGTGCA GAGGATAAGAGGGCG CTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCA CAAGGTCA TGGCTGATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCA TTTGCTACAGCGGATGGCTGAGTAAGGATTTATTAGCTGTTATACA ATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTTATCC              ]
[+] EMBL BM421836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCCAGAAGTTCGAGGATTTGGCCTATGTGATGAGTGGGAGTAGNCCCCACGAGGATGAATGCTATCCGTATAAGGAAGGAAAACCACGGTTTACAGTCCACGAGGATAAGAGGGCGCCTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCACCAAGGTCACTGGCTGATTTGCAGCGCTTAGT CCAAGAACCCTTGGAAATGATGTAGGACCTTCCCATGATCCACTTTGCTACAGCGGATGGCTGAGTAAGGATTTATTAGCTGTTATACANATGAATGATCACCACTATTT CCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACCTTGCACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTTAaaaaaaaaa        ]




>consensus_14300#0
GCCGGCGATCCGCCGCCATGGGTCGCACGGAGGGCCGCCTCGCGTCCGTGGTGCACCTCC
CCGGCCGCTCCAGGGTCTCCGCCTCACCCTCCCCTCGCCGCCGCCGCTCCCCGTCCCGGT
CGCCCTCCCCGCGCCGCAACCGCCGCCGCGACCGGTCGCCTAGCCCCTACCGCAGCCGCA
GGGACCGGTCCCCTAGCCCCTACCGCAACCGCCGCCGCCAGTGGTCCCCCTACCACCGCG
ACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTCGGGACCGAGACCACCCTGCGCCCCGTC
GCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGC
AGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGA
GCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATG
AGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGA
AGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGATAGCAAGGGTTCGTCGGAATCCGACT
CCGGTGAGTCTGATAGCTTGTCCGATTCCAGCAAATCAGATGATACCCGGAGGAAGAAGA
AAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGCCACCATT
CATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGCTCTTATG
ATTCCGAGGACTCTATGGATAGGAGGAAGAAGAAGAGATCGCGGAGGCACAAGAAGTCTA
AGAGGAGGGGAAGGAGCTCCAGGAGGAAGAAGAGGAAGAGCAATGATACAGCTTCTGAGG
GAAGCTCTGAGGAGGAGGCGGTGGCAGCGGCTTCAGCATCAAGCCCTAGCCCCTTGAGGG
ACAGTAAGAAGAAGAGCCGGAGCTCACGGAGGAAGAGGAGCAAGCAGTCTGATACGGAAG
ATCAGGCCCCATCCGATGCCGACCTTGGTGTTAAGGAAATCGATGAGACAAATGAGCCAG
AGATTGACCCAGAAGCAATCAAATTCAAGGAAATGCTCGAGGCCCAAAAGAAGGCTGCTT
TGGAGAATGAGATGCCGGTTGGGCCAATGCCTCTTCCTCGTGCAGAAGGTCATATTAGCT
ATGGTGGTGCACTGAGACCTGGAGAAGGTGATGCTATTGCACAGTACGTACAGCAAGGGA
AACGTATCCCACGACGTGGTGAGGTTGGTCTATCTGCAGAGGAGATTCAGAAGTTCGAGG
ATTTGGGCTATGTGATGAGTGGGAGTAGGCACCAGAGGATGAATGCTATCCGTATAAGGA
AGGAAAACCAGGTTTACAGTGCAGAGGATAAGAGGGCGCTTGCTATGTTTAATTATGAGG
AGAAGTCGAAGCGAGAGCACAAGGTCATGGCTGATTTGCAGCGCTTAGTGCAAAGAACCA
TTGGAAATGATGTAGGACCTTCCCATGATCCATTTGCTACAGCGGATGGCTGAGTAAGGA
TTTATAGCTGTTATACAATGAATGATCACCACTATTTCCTTTTCTTTTTATGATCCCTAT
AGTATAGGTCATGATCTCTAAGATGCCAGTTAGTGCTGTGGATATCTTCACAGACATTGC
ACTTGAACCGTACTATTAGAACTTATTTGTAATTTCTGTTTTGTGTTGAGTATTGACTAC
TTGTGATGCTTATCCTACTTGTTCTGTTT

consensusID : consensus_14300#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 738
fasta sequence

                              [CTTCCCCAAATCCCCAATCCGACCTAAGCCGGCGATCCGCCGCCATGGGTCGCACGGAGGGCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCGCCCTCCCCTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACCGGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCGACCGCCGCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTCGGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGAC]

[+] EMBL CB647824             [CTTCCCCAAATCCCCAATCCGACCTAAGCCGGCGATCCGCCGCCATGGGTCGCACGGAGGGCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCGCCCTCCCCTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACCGGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCGACCGCCGCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTCGGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGTCCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCCGCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCAGCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGGAGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGAC]




>consensus_14300#1
CTTCCCCAAATCCCCAATCCGACCTAAGCCGGCGATCCGCCGCCATGGGTCGCACGGAGG
GCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCGCCCTCCC
CTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACC
GGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCGACCGCC
GCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTC
GGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGT
CCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCC
GCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCA
GCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGG
AGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGG
AAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGCGTAGCCGCCACCGCCGCCGC
CACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGGCTGAGGAGGATTCGGAGGGC
TCTTATGATTCCGAGGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14300#0      ---------------------------GCCGGCGATCCGCCGCCATGGGTCGCACGGAGG 33
consensus_14300#1      CTTCCCCAAATCCCCAATCCGACCTAAGCCGGCGATCCGCCGCCATGGGTCGCACGGAGG 60
                                                  *********************************

consensus_14300#0      GCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCACCCTCCC 93
consensus_14300#1      GCCGCCTCGCGTCCGTGGTGCACCTCCCCGGCCGCTCCAGGGTCTCCGCCTCGCCCTCCC 120
                       **************************************************** *******

consensus_14300#0      CTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACC 153
consensus_14300#1      CTCGCCGCCGCCGCTCCCCGTCCCGGTCGCCCTCCCCGCGCCGCAACCGCCGCCGCGACC 180
                       ************************************************************

consensus_14300#0      GGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCAACCGCC 213
consensus_14300#1      GGTCGCCTAGCCCCTACCGCAGCCGCAGGGACCGGTCCCCTAGCCCCTACCGCGACCGCC 240
                       ***************************************************** ******

consensus_14300#0      GCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTC 273
consensus_14300#1      GCCGCCAGTGGTCCCCCTACCACCGCGACCGTGGCCGCGACGTGGAGAGGGAGTGGGCTC 300
                       ************************************************************

consensus_14300#0      GGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGT 333
consensus_14300#1      GGGACCGAGACCACCCTGCGCCCCGTCGCGGCGGCGGCGGCGCGGGGGCCGGCGCCTGGT 360
                       ************************************************************

consensus_14300#0      CCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCC 393
consensus_14300#1      CCGCCTCCGACGATGACGACGACGAGCAGCTCAAGGGTCTCACCTACTTCGAGTACCGCC 420
                       ************************************************************

consensus_14300#0      GCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCA 453
consensus_14300#1      GCGTCAAGAGAGAGAAGCTCCGCAAGAGCATGAAGCGGTGCATCTGGAACATCACGCCCA 480
                       ************************************************************

consensus_14300#0      GCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGG 513
consensus_14300#1      GCCCTCCTCGCCGCGAAGGTGAGGATGAGGATTATGGCTACAGCGACGAGGAGGAGGAGG 540
                       ************************************************************

consensus_14300#0      AGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGG 573
consensus_14300#1      AGGAGGAGAAAAAGGAATCGCCAAAGAAGGTGGCCTCCTCGGATAAGAGCGAAGAGGAGG 600
                       ************************************************************

consensus_14300#0      ATAGCAAGGGTTCGTCGGAATCCGACTCCGGTGAGTCTGATAGCTTGTCCGATTCCAGCA 633
consensus_14300#1      A----------------------------------------------------------- 601
                       *                                                           

consensus_14300#0      AATCAGATGATACCCGGAGGAAGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGC 693
consensus_14300#1      ---------------------AGAAGAAAGGGCGTAAGGGTAGTCACCGTAGCAGCAAGC 640
                                            ***************************************

consensus_14300#0      GTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGG 753
consensus_14300#1      GTAGCCGCCACCGCCGCCGCCACCATTCATCTGATACAGAGGGTGACGACAACAGCAAGG 700
                       ************************************************************

consensus_14300#0      CTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGACTCTATGGATAGGAGGAAGAAGA 813
consensus_14300#1      CTGAGGAGGATTCGGAGGGCTCTTATGATTCCGAGGAC---------------------- 738
                       **************************************                      

consensus_14300#0      AGAGATCGCGGAGGCACAAGAAGTCTAAGAGGAGGGGAAGGAGCTCCAGGAGGAAGAAGA 873
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      GGAAGAGCAATGATACAGCTTCTGAGGGAAGCTCTGAGGAGGAGGCGGTGGCAGCGGCTT 933
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      CAGCATCAAGCCCTAGCCCCTTGAGGGACAGTAAGAAGAAGAGCCGGAGCTCACGGAGGA 993
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      AGAGGAGCAAGCAGTCTGATACGGAAGATCAGGCCCCATCCGATGCCGACCTTGGTGTTA 1053
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      AGGAAATCGATGAGACAAATGAGCCAGAGATTGACCCAGAAGCAATCAAATTCAAGGAAA 1113
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      TGCTCGAGGCCCAAAAGAAGGCTGCTTTGGAGAATGAGATGCCGGTTGGGCCAATGCCTC 1173
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      TTCCTCGTGCAGAAGGTCATATTAGCTATGGTGGTGCACTGAGACCTGGAGAAGGTGATG 1233
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      CTATTGCACAGTACGTACAGCAAGGGAAACGTATCCCACGACGTGGTGAGGTTGGTCTAT 1293
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      CTGCAGAGGAGATTCAGAAGTTCGAGGATTTGGGCTATGTGATGAGTGGGAGTAGGCACC 1353
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      AGAGGATGAATGCTATCCGTATAAGGAAGGAAAACCAGGTTTACAGTGCAGAGGATAAGA 1413
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      GGGCGCTTGCTATGTTTAATTATGAGGAGAAGTCGAAGCGAGAGCACAAGGTCATGGCTG 1473
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      ATTTGCAGCGCTTAGTGCAAAGAACCATTGGAAATGATGTAGGACCTTCCCATGATCCAT 1533
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      TTGCTACAGCGGATGGCTGAGTAAGGATTTATAGCTGTTATACAATGAATGATCACCACT 1593
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      ATTTCCTTTTCTTTTTATGATCCCTATAGTATAGGTCATGATCTCTAAGATGCCAGTTAG 1653
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      TGCTGTGGATATCTTCACAGACATTGCACTTGAACCGTACTATTAGAACTTATTTGTAAT 1713
consensus_14300#1      ------------------------------------------------------------
                                                                                   

consensus_14300#0      TTCTGTTTTGTGTTGAGTATTGACTACTTGTGATGCTTATCCTACTTGTTCTGTTT 1769
consensus_14300#1      --------------------------------------------------------