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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14308#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1530 fasta sequence
[GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT-GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG-CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA-TTGGCGTGCCGGAACC-GCTCTCGGTGTTCGTCGACACTTACGGCACGGG-CAAGATCCCTGACAGGGAGA-TCCTCAGGATTGTCAC-GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA-ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA]
[+] EMBL CB618195 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAG ]
[+] EMBL CB618233 [GCTCTCCGTTTAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCCACGACGAAATCGCGGCTGACCTGAAGGAGCA ]
[+] EMBL CB618165 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT ]
[+] EMBL CB618128 [GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA ]
[+] EMBL CB618193 [GCTCTCCCTT AAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCAT ]
[+] EMBL CB618125 [GCTCTCCCTT AAAGCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCCTGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGTCAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTGCCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGTCATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGATACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCA ]
[+] EMBL CA765675 [ GCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAAGGTTCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTTCACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAACCGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCGTCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCAAGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGTGCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTACGCCATTTGGCGTGCCGGAACCGGTTTTNGGGGTTCGTCGACACTTACNGCACGGGCCAAGATCCCTG CAGGGAAANNCCTCAGGATTGTCACNGGANAACTTCGATTTCAGGNCAGGCATGATCA ]
[-] EMBL CB618166 [ TCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ]
[-] EMBL CB625973 [ GTACCTTGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTGGTCATCGGTGGACCTCATGGAGATGCAGGTTTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGGTGGGGAGCACACGGTGGT GGGGCGTTTTCCGGCAAGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGTGAAACCCCTCAAGTGGGAGGAGCCTTTTGCATAAACAAACACTTGCAGCCTTTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATt ]
[-] EMBL CB618129 [ TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGCCCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAGACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA]
[-] EMBL CB618126 [ TTGATGAGAAGACCATCTTCCATCTCAACCCGTCAGGTCGGTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ]
[-] EMBL CB618194 [ TGATGAGAAGACCATTTTCCATCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGTTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTCATTGGTCCTAAAAAAAAAAAAa ]
[-] EMBL CB618234 [ GGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGGGCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGT GGCGCGTTCTCCGGCAAGGACCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGCGTGCCGGAACC GCTCTCGGTGTTCGTCGACACTTACGGCACGGG CAAGATCCCTGACAGGGAGA TCCTCAGGATTGTCAC GGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAA ACTGAAGCCTCTC ]
[-] EMBL CB625972 [ AGGACCCGACCAAGGTTGACCGGAGGGGAGCCTACATTGCAAGGCAGGGGGCCAAGAGCATTGTTGCCAATGG CCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCA TTGGGGTGCCGGAACC GCTTTCGGTGTTTGTGGACAATTACGGCACGGG CAAGATCCCTGACAGGGGGA TCCTCAGGATTGTCCC GGAGAATTTGGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGGGGCAATGGCCGCTACCTGAAGACGGGGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCCCCTGGGAGGGGGGGAAACCCCTCAAGTGGGAGGAGCTTTTTGCATAAACAAACACTTGCAGCCTTTAAAAATGTTTTGGAAAAGTTTCCATTGATTTGGGAGATGTTTTTATTTACACTTCAGCCTCTGAAGTTAATCAGACGGTCACTACAGGTATTTATTTTCCCTCCCTTAGTAGCAGGCAGGTAGGT ]
consensusID : consensus_14308#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 687 fasta sequence
[GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA]
[-] EMBL CA763223 [GCTGGGGAGCACACGGTGGTGGCGCGTTCTCCGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCAAGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAGGCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACAGGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCAACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACTTCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGCCCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATTTTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTATCTATTTTCACTGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA]
consensusID : consensus_14308#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 236 fasta sequence
[ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA]
[+] EMBL BI801530 [ACCGTCACTACATGTATCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTTCTTGTGTTAAAGAAGCTTGTGTGGTGATGTGAGGGGATGATGAAACTATAAAGAAACTGAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCTTGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14308#0 GCTCTCCGTTCAAACCGTCCCGCGCCGCCGCGGCCGCTGCAACCCGCGCGCGCGGACTCC 60
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TGCCTCTCGGTCGAAGGAGATGGCTGAGGTTGACACCTTCCTCTTCACTTCCGAGTCCGT 120
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CAATGAGGGACACCCTGACAAGCTCTGCGACCAGATATCCGATGCGGTGCTTGATGCGTG 180
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CCTTGCTGAAGACCCTGAAAGCAAGGTTGCCTGTGAGACCTGCACCAAGACCAACATGGT 240
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CATGGTGTTTGGTGAGATCACTACCAAGGCCAATGTTGACTATGAGAAGATCGTCAGGGA 300
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TACTTGCCGCGGCATCGGCTTTGTGTCCAATGATGTAGGCCTTGATGCTGAACACTGTAA 360
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GGTGCTTGTCAACATTGAGCAGCAATCCCCTGACATCGCACAGGGTGTCCATGGGCACTT 420
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CACCAAGCGCCCAGAGGAGATTGGTGCCGGTGACCAGGGGCATATGTTTGGATATGCAAC 480
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CGATGAGACCCCTGAATTGATGCCACTCAGCCATGTTCTTGCTACCAAGCTCGGTGCCCG 540
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TCTCACCGAGGTCCGCAAGAACGGGGCATGCGCATGGCTGAGGCCTGATGGGAAGACGCA 600
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 AGTGACAGTGGAGTACCAGAACGACAATGGCGCCATGGTCCCTCTCCGCGTCCACACCGT 660
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GCTCATCTCCACCCAGCACGATGAGACCGTGACCAACGACGAAATCGCGGCTGACCTGAA 720
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GGAGCATGTCATCAAGCCTGTCATCCCAGAGCAGTACCTTGATGAGAAGACCATCTTCCA 780
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TCTCAACCCGTCAGGTCGCTTCGTCATCGGTGGACCTCATGGAGATGCAGGTCTCACCGG 840
consensus_14308#1 ------------------------------------------------------------
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GCGCAAGATCATCATCGACACCTACGGTGGCTGGGGAGCACACGGTGGTGGCGCGTTCTC 900
consensus_14308#1 -----------------------------GCTGGGGAGCACACGGTGGTGGCGCGTTCTC 31
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CGGCAAGGACCC-GACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 959
consensus_14308#1 CGGCAAGGACCCCGACCAAGGTTGACCGGAGCGGAGCCTACATTGCAAGGCAGGCGGCCA 91
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATTG 1019
consensus_14308#1 AGAGCATCGTTGCCAATGGCCTCGCGCGCCGCTGCATTGTCCAGGTGTCGTATGCCATAG 151
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 1079
consensus_14308#1 GCGTGCCGGAACCGCTCTCGGTGTTCGTCGACACTTACGGCACGGGCAAGATCCCTGACA 211
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 1139
consensus_14308#1 GGGAGATCCTCAGGATTGTCACGGAGAACTTCGATTTCAGGCCAGGCATGATCATCATCA 271
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 1199
consensus_14308#1 ACCTCGACCTGATGAGGGGTGGCAATGGCCGCTACCTGAAGACGGCGGCTTACGGGCACT 331
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 1259
consensus_14308#1 TCGGGAGGGAGGACCCTGACTTCACCTGGGAGGTGGTGAAACCCCTCAAGTGGGAGGAGC 391
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 CTTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 1319
consensus_14308#1 CCTCTGCATAAACAAACACTTGCAGCCTCTAAAACTGTTTTGGAAATGTTTCCATTGATT 451
consensus_14308#2 ------------------------------------------------------------
consensus_14308#0 TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 1379
consensus_14308#1 TTGGAGATGTTTTTATCTACACTTCAGCCTCTGAACTTAATCAGACCGTCACTACATGTA 511
consensus_14308#2 --------------------------------------------ACCGTCACTACATGTA 16
****************
consensus_14308#0 TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 1436
consensus_14308#1 TCTATTTTCAC---TGCCTTAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 568
consensus_14308#2 TCTATTTTCACGTGCACTTGAGTAGCAGGCAGGTATGTTTAAGGTCTTATGCTTAGTGTT 76
*********** * * ****************************************
consensus_14308#0 CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 1496
consensus_14308#1 CTTGTGTTAAAGAAGCTTGTGTGGTGAGTGGTGAGGGGATGATGAAACTATAAAGAAACT 628
consensus_14308#2 CTTGTGTTAAAGAAGCTTGTGTGGTGAT--GTGAGGGGATGATGAAACTATAAAGAAACT 134
*************************** ******************************
consensus_14308#0 GAAGCCTCTCATTGGTCCTAAAAAAAAAAAAGGA-------------------------- 1530
consensus_14308#1 GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCCAAAAAAAAAAAAA- 687
consensus_14308#2 GAAGCCTCTCATTGGTCCTTGTCTTGTGCGCAGTGCACTTCTGTCACAAATGGGGTGTCT 194
******************* *
consensus_14308#0 ------------------------------------------
consensus_14308#1 ------------------------------------------
consensus_14308#2 TGCTTGATCTCTGAATAATTAAGCAAGCTCTCTTGCAAAAAA 236
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||