cluster # 14379

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Oryza sativa
cluster # 14379 cluster # 14379 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14379#0 length = 1650 sequences # 15

consensus_14379#1 length = 145 sequences # 1

consensusID : consensus_14379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1650
fasta sequence

                              [CGCGGTGACGAGACGACGCGAGTAGTGCGAGGTGGAGAAGACGAGCCGACACCACCACCACCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTG-AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC-TTGGTGAGGGTGGGTTTGGCAGCGTCTAC-TGGGGCCAGCTCTGGGATGGATCAC-AGATTGCGG-TGAAAAGGCTCAAGAG-TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCAC-GGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTT-CAAGGAAATTGCTGATCCAAAG-CT-CAA-GGATGTCTTC-GT-CGAGGCTGAACTG-AAGCGAATGGTGCTTGTT-GGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG-TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT-CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT-CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAAGTTAACATGTTGTTCCCAAAAAAAA]

[+] EMBL AK068056             [CGCGGTGACGAGACGACGCGAGTAGTGCGAGGTGGAGAAGACGAGCCGACACCACCACCACCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTG AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC TTGGTGAGGGTGGGTTTGGCAGCGTCTAC TGGGGCCAGCTCTGGGATGGATCAC AGATTGCGG TGAAAAGGCTCAAGAG TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCAC GGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTT CAAGGAAATTGCTGATCCAAAG CT CAA GGATGTCTTC GT CGAGGCTGAACTG AAGCGAATGGTGCTTGTT GGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAAGTTAACA                  ]
[+] EMBL AK099031             [                           CGAGGTGGAGAAGACGAGCCGACACCACCACCACCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTG AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC TTGGTGAGGGTGGGTTTGGCAGCGTCTAC TGGGGCCAGCTCTGGGATGGATCAC AGATTGCGG TGAAAAGGCTCAAGAG TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACCCATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTTGGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCCAGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCAC GGAGTGGGCACTTCCACTTGCCCGTGACAAAAAGTT CAAGGAAATTGCTGATCCAAAG CT CAA GGATGTCTTC GT CGAGGCTGAACTG AAGCGAATGGTGCTTGTT GGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAAGTTAACA                  ]
[+] EMBL CA755355             [                                            GCCGACACCACCACCACCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTG AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC TTGGTGAGGGTGGGTTTGGCAGCGTCTAC TGGGGCCAGCTCTGGGATGGATCAC AGATTGCGG TGAAAAGGCTCAAGAG TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGGCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGAAGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C93433               [                                                            CCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGG GTNGNAGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGA GAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGCTTTNGTGAGGGTTGGTTTNGCAGCGTCTACTTGGGGCCAGCTCTNGGATGGATCACAAGATTGCGGTTNAAAAGGCTCAAGAGTTTGGAGCAACAAAGCTGAAACTna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU058428             [                                                               CCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGGGGTG AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCTTGCTGCAAAGGGGTGGACGGGGTTCTACCTNGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACA TCAGCGACGAACAATTTCAACTATGACAACAA C TTGGTGANGGTGGG TTGGCA CG CTAC TGGGGCCA CTCTGGGAT GATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU095049             [                                                                CACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTCCTCAACCAGCTGTCTCGCGGTCGCCGGCGGNGTTG AGGGGAGGAAGCGGGGCTGCCTCGCGCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTGTCGGCGGCGATGGGGTGGGCTTCTTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGGAGGAAGAAGAAGAAGGAGACGACATGGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C22530               [                                                                                                                                                                                                                                                                                                                                               TCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC TTGGTGAGGGTGGGTTTGGCAGCGTCTAC TGGGGCCAGCTCTGGGATGGATCAC AGATTGCGG TGAAAAGGCTCAAGAG TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAGG CAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C22536               [                                                                                                                                                                                                                                                                                                                                               TCTCGCTGAAGGAGCTACAGTCAGCGACGAACAATTTCAACTATGACAACAAGC TTGGTGAGGGTGGGTTTGGCAGCGTCTAC TGGGGCCAGCTCTGGGATGGATCAC AGATTGCGG TGAAAAGGCTCAAGAG TTGGAGCAACAAAGCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTGTTGAGCTTACGTGGCTATTGTGCCGAAG  CAAGAACGCCTGATAGTCTACGATTATATGCCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGTTGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCACCAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAGAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU030383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                nGCCCATTTAGGAGCTNANCCCNNCTACGAAGCTAACTATCACNGGNGTGGNCACTTCCACTTGCCCGTGACAAAAGTTT CANGGAAATTGCTGATCCAATN CT CAA GGATNTCTTCNGTNCGAGGCTGANCTGAAAGCGAATGGTGCTTGTT GGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAAGTTAACATGTTGTTCCCAAAAAAAA]
[+] EMBL AU095082             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tcCCACTTGCCCTTGACAAAAAGTTCCAAGGAAATTGCTGACCCAAAGCCTCCAAGGGATGTCTTC GT CGAGGCTGAACTG AACCGAATGGTGCTTGTTGGGGCTTGCATGCAGTCAGAACAAACAGGAACAGAGCCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCCACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAAGTTAACATGTTGTTCCCAAAAAAAA]
[+] EMBL C22537               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGGAACAGAGGCCGATAATGTCNGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGNTGAGAAGCTTTCCAACTTGGAGAATGATGAGANGTTTCAAGCCTGATNTGACCAGCTCCTTNCAGGACTCATCTCATTCGTCTCATCCNGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGATCCAAGGCCNACATGTTnnca          ]
[+] EMBL C22531               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCNGAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATNTNGTGCTGATCCAAAG CAACAT                 ]
[+] EMBL OSS1726A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGG TTGGGTGCTTNCCTTGTCATCTCACAGATATACTTATCTGTGTG ATGG TAATTGTTACAA                                                                                       ]
[+] EMBL OSS1995A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTCCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTT CCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTG                                                                                                                                                                  ]
[+] EMBL AU222495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTGAGCTGCTCAAGGGAGAATCTGCTGAGAAGCTTTNCAACTTGGAGAATGATGAGATG TTCAAGCCTGATCTGACCAGCTCCTTCCAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCAT CACAGAAGAGAAGAACTCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGGTAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCCTTNCCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGGTTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTACAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCAaaaa                                        ]




>consensus_14379#0
CGCGGTGACGAGACGACGCGAGTAGTGCGAGGTGGAGAAGACGAGCCGACACCACCACCA
CCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTC
CTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTGAGGGGAGGAAGCGGGGCTGCCTCGC
GCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTG
TCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGG
AGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCG
ACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGG
GGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAA
GCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTG
TTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATG
CCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGT
TGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCAC
CAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAG
AATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACC
CATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTT
GGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCC
AGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGG
GCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGAT
GTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAAC
AAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCT
GAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTC
CAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAAC
TCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGG
TAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCC
TTCCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCCTTGTTTACCGGCAGG
TTTGGGTGCTTCCCTTGTCATCTCACAGATATACTTATCTGTGTGTATGGTTAATTGTTA
CAATCTGTTTTCGGTATGGTTGTACCATGGCTTGTAAAATTCTGCATATCTGGTGCTGAT
CCAAAGTTAACATGTTGTTCCCAAAAAAAA

consensusID : consensus_14379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 145
fasta sequence

                              [TGCGTGTTTATGCCCTTGTTTGACCGGCACGGTTTGGGTGCTGTGCCCTGGTGCATCTGCACAGATATACTTATCTGGTGTGTGATGGTTAATTGGTTGACATCTGTTTTCGGTATGGTTGGTACCACTGGCTTGTAAAATTCTG]

[+] EMBL BI808069             [TGCGTGTTTATGCCCTTGTTTGACCGGCACGGTTTGGGTGCTGTGCCCTGGTGCATCTGCACAGATATACTTATCTGGTGTGTGATGGTTAATTGGTTGACATCTGTTTTCGGTATGGTTGGTACCACTGGCTTGTAAAATTCTG]




>consensus_14379#1
TGCGTGTTTATGCCCTTGTTTGACCGGCACGGTTTGGGTGCTGTGCCCTGGTGCATCTGC
ACAGATATACTTATCTGGTGTGTGATGGTTAATTGGTTGACATCTGTTTTCGGTATGGTT
GGTACCACTGGCTTGTAAAATTCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14379#0      CGCGGTGACGAGACGACGCGAGTAGTGCGAGGTGGAGAAGACGAGCCGACACCACCACCA 60
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CCACCACCACCACGAGAGGAGGAAGCCGCGGGTCTCCTCGTCTTCTCCTCTCTCTCTCTC 120
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CTCAACCAGCTGTCTCGCGGTCGCCGGCGGCGGTGAGGGGAGGAAGCGGGGCTGCCTCGC 180
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GCGGCGGGAGGTCTCCGGAGAGGGAGGGGTGTCGTGCTGATTTGGGGGGCTGCGGCGGTG 240
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TCGGCGGCGATGGGGTGGGCTTCCTGCTGCAAGGGGGTGGACGGGGTTCTACCTGGCCGG 300
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      AGGAAGAAGAAGAAGGAGACGACATGGCGGATCTTCTCGCTGAAGGAGCTACAGTCAGCG 360
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      ACGAACAATTTCAACTATGACAACAAGCTTGGTGAGGGTGGGTTTGGCAGCGTCTACTGG 420
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GGCCAGCTCTGGGATGGATCACAGATTGCGGTGAAAAGGCTCAAGAGTTGGAGCAACAAA 480
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GCTGAAACTGAATTTGCAATTGAGGTGGAGGTTTTGGCGACAGTGAGACACAAGAGCCTG 540
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TTGAGCTTACGTGGCTATTGTGCCGAAGGCCAAGAACGCCTGATAGTCTACGATTATATG 600
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CCAAACCTGAGCTTGCACTCCCACCTTCATGGACAGCATGCAGCTGAATGCCATCTTGGT 660
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TGGGAACGAAGAATGAAGATCGCTATTGATTCTGCAGAAGGGATTGCATATCTTCATCAC 720
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CAAGCGACACCACATATCATTCATCGGGATATCAAGTCAAGCAATGTTCTGTTGGACAAG 780
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      AATTTCCAAGCACGGGTTGCCGATTTTGGTTTTGCAAAGCTCATTCCAGATGGTGCAACC 840
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CATGTCACTACAAAGGTGAAGGGTACACTCGGTTATCTTGCACCGGAATACGCCATGCTT 900
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GGGAAGGCCTCTGAAAGCTGTGATGTCTTCAGCTTTGGAGTACTGCTGCTAGAGCTTGCC 960
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      AGTGGAAAGAGGCCAGTTGAGAAGCTAAACCCCACTACGAAGCTAACTATCACGGAGTGG 1020
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GCACTTCCACTTGCCCGTGACAAAAAGTTCAAGGAAATTGCTGATCCAAAGCTCAAGGAT 1080
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GTCTTCGTCGAGGCTGAACTGAAGCGAATGGTGCTTGTTGGGCTTGCATGCAGTCAGAAC 1140
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      AAACAGGAACAGAGGCCGATAATGTCTGAAGTCGTTGAGCTGCTCAAGGGAGAATCTGCT 1200
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      GAGAAGCTTTCCAACTTGGAGAATGATGAGATGTTCAAGCCTGATCTGACCAGCTCCTTC 1260
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      CAGGACTCATCTCATTCGTCTCATCCTGATAGTTCAGACTGCATCACAGAAGAGAAGAAC 1320
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TCAAAAGCAGATACAATAGACGAGGCAGTTGATTCAAGTGAGACAGTACCTTCAGCTAGG 1380
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TAGTTTGATGCATAGAATTATAAGTTATCTGTCATTCATCAGCAGGAGTTATTGGTTTCC 1440
consensus_14379#1      ------------------------------------------------------------
                                                                                   

consensus_14379#0      TTCCGTGGAGCATTGTGTGTTTACCTCTGCATGCGTGTTTATGCC-TTGTTT-ACCGGCA 1498
consensus_14379#1      -------------------------------TGCGTGTTTATGCCCTTGTTTGACCGGCA 29
                                                      ************** ****** *******

consensus_14379#0      -GGTTTGGGTGCTT--CCCTTGT-CATCT-CACAGATATACTTATCTG-TGTGT-ATGGT 1551
consensus_14379#1      CGGTTTGGGTGCTGTGCCCTGGTGCATCTGCACAGATATACTTATCTGGTGTGTGATGGT 89
                        ************   **** ** ***** ****************** ***** *****

consensus_14379#0      TAATTG-TTACAATCTGTTTTCGGTATGGTTG-TACCA-TGGCTTGTAAAATTCTGCATA 1608
consensus_14379#1      TAATTGGTTGACATCTGTTTTCGGTATGGTTGGTACCACTGGCTTGTAAAATTCTG---- 145
                       ****** **   ******************** ***** *****************    

consensus_14379#0      TCTGGTGCTGATCCAAAGTTAACATGTTGTTCCCAAAAAAAA 1650
consensus_14379#1      ------------------------------------------