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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1604 fasta sequence
[TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG-TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA-GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA-GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG-GTTGGAAGCAGTGGAGAGCGGCGATGCC-GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA-ACCC-GGACCTGGTCG-AGCGGTTCAGGCTGAACGCCGGGCTG-AACAAGTACGTGCGTAAGACA-TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT-AAA-TCA-AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA-ACGGTGAGGTGATTTAGCTTATTT-TTGGGACCTAATTTG-ACGGTAATTTATTC-TTTCACC-AAAT-CTGATATGAT-CCATT-GCT-GATTCAGTAGCTACTCTAGCCTATGTAAA-CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA-CCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA]
[+] EMBL AK071203 [TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCA ]
[+] EMBL OSS10929A [TTNCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGNCGGATCAGCAGCGGCAGAAGCAGGCGNCGCTCTTCTCGNCGTACCAGATGNCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGACGATGACGCGGTGCAGGGCGATCGnc ]
[+] EMBL AK104843 [ ACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCCG TCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGCTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCAT ]
[+] EMBL CB669879 [ TCCTCCCTTCACTCCCCAACTCGCCATTTTCCCCGATATTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAA CGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAG ]
[+] EMBL CB641417 [ CGCGATCCAGCAGCGGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGT ]
[+] EMBL CB651181 [ CGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCGGTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGACCACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGA GGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCAC ]
[+] EMBL CF322757 [ TCTCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATCAGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCGCCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGCCATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCAATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCGCTGCCGGTTCCTACTTGAGGGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCC GCAGCAGTCAGGGGCGGCTCGCCTACCTCCACGTCACGCAGCC ]
[-] EMBL CB651182 [ CAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAAgt ]
[-] EMBL CB669878 [ CAGACCGAGTCGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAAGCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCA GGGCGGCTCGCCTACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGG GTTGGAAGCAGTGGAGAGCGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTGTAGCAGATTTATGCATCGTA CCAGTTAGTAACT ]
[+] EMBL BI807868 [ CTACACGCGGGAGCTTGGCGTTGGAACCCGTGGAGA CGGCGATGCC GACCTGGTGTCGTACGGGCGGCTCTTCATATCCA ACCC GGACCTGGTCG AGCGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGCAAGACACTTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACCGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCACAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCACACGGTGAGGTGATTTAGCTTATTTCTTGGGACCTAATTTGCACGGTAATTTATTC TTTCACC CAAT CTGATATGAT CCCTT GCT GATTCCGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCCCAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTACCCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA]
[+] EMBL BM420981 [ GGCGATGCCNGACCTGGTGTCGTACGGGCGGCTCTTCATATCAA ACCC GGACCT GTCG A CGGTTCAGGCTGAACGCCGGGCTG AACAAGTACGTGCGCAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAA TTG ACGGTAATTTATTCNNTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAACCCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAA ]
[+] EMBL BQ908147 [ GTGTCGTACGGGCGGCTCTTCATATCAATACCCTGGACCTGGTCGTACCGGTTCAGGCTGAACGCCGGGCTGTAACAAGTACGTGCGCAAGACA TTCTACACGCCCGATCCTGTCGT GGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTGAAAGTCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACCAAAATGCTGATATGATGCCATTGGCTGGATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTA CCAGTTAGTAACTGTTATTTTGATGGGAAAAAAA ]
[+] EMBL AU065853 [ TGCGTAAGACA TTCTACACGCCCGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTNGCGGATGTAAATGTACTGCGGGATAAGT AAA TCA AGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCA ACGGTGAGGTGATTTAGCTTATTT TTGGGACCTAATTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTAGCAGATTTATGCATCGTAaaaaa ]
[+] EMBL CF931996 [ tcacTTTG ACGGTAATTTATTC TTTCACC AAAT CTGATATGAT CCATT GCT GATTCAGTAGCTACTCTAGCCTATGTAAA CCTTGGGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAaaaaaa ]
consensusID : consensus_14405#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGCATACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCGGCGATGCCGACCTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGAGCGGTTCAGGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCCCGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTTCCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTGGGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAAAAGG]
[-] EMBL CB641418 [TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGCATACCTCCACGTCACGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAGCATGGCAGTGCCGAGGAGGAGAGCCGCCTGATGCGCACCCTCCGGGGCACGTACCAGGGCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCGGCGATGCCGACCTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGAGCGGTTCAGGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCCCGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCGCGGATGTAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAGGGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTTCCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTGGGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAAAAGG]
consensusID : consensus_14405#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[GATTCGGCCGAGCTCGTGCCGAATTCGGCACGAGCCCCAACTCGCCATTTTCCCCGTCTTCCACAGTGACAACCACCACCCCAGGCTTTCCCCTTCCTCCTCGCGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACCGGTGCAAGGCGATCGGNGGGGTGCCCGGCCCGGCGCTGGCGGAATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCNCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACNATCCANANCAGACTGATGCTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTGGCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAACGGTGNTGNNC]
[+] EMBL BE228984 [GATTCGGCCGAGCTCGTGCCGAATTCGGCACGAGCCCCAACTCGCCATTTTCCCCGTCTTCCACAGTGACAACCACCACCCCAGGCTTTCCCCTTCCTCCTCGCGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGCGCCGCTCTTCTCGCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACCGGTGCAAGGCGATCGGNGGGGTGCCCGGCCCGGCGCTGGCGGAATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCNCCCGCTGGCCCGGGGTTTCCTCATGTCCCTGGGATATACNATCCANANCAGACTGATGCTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTGGCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAACGGTGNTGNNC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14405#0 TTTCCCATTTCGCTCACCTGTTCCCCTCCTCCGCCCTCTCCCCAACTCGCCATTTTCCCC 60
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GTCTTCCACAGTGACAACCACCACCCCACGCTTTCCCCTTCCTCCTCGCGATCCAGCAGC 120
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GGGAGAGATGGATCGGCCGCCGCCGGATCAGCAGCGGCAGAAGCAGGCGCCGCTCTTCTC 180
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GCCGTACCAGATGCCCCGCTTCCGCCTCAACCACCGGGTGGTGCTGGCGCCGATGACGCG 240
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GTGCAGGGCGATCGGCGGGGTGCCCGGCCCGGCGCTGGCGGAGTACTACGCGCAGCGGAC 300
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 CACCCAGGGTGGCCTGCTCATCTCCGAGGGCACCGTCGTCTCGCCCGCTGGCCCGGGGTT 360
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 TCCTCATGTCCCTGGGATATACAATCAAGAGCAGACTGATGCATGGAAGAAGGTGGTGGA 420
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 TGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCAGTTATGGCATGTAGGCAGAGCTTC 480
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 TCACCAAGTATACCAGCCAAACGGTGCTGCACCAATATCCTCAACTGATAAGCCAATATC 540
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 AGCAAGATGGAGAATACTGATGCCTGATGGCTCCTATGGCAAGTATCCTAAACCTAGGCG 600
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 CCTGGCAGCATCGGAAATACCTGAAATTGTCGAACAATATCGTCAAGCCGCCATTAATGC 660
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 CATTGAAGCAGGTTTTGATGGCATTGAGATCCATGGTGCTCATGGCTATATCATTGATCA 720
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 ATTCCTAAAGGATGGAATCAATGACCGCACTGACGAGTATGGTGGCTCACTTTCCAACCG 780
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 CTGCCGGTTCCTACTTGAGGTAACTAGGGCTGTGGTTTCTGCCATTGGAGCAGACCGAGT 840
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 CGCGGTGAGGATATCACCAGCCATTGATCACCTTGACGCCTATGATTCAGACCCCATTAA 900
consensus_14405#1 ------------------------------------------------------------
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GCTCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGC 960
consensus_14405#1 --TCGGCATGGCCGTTGTTGAGCGGCTGAATGCTCTCCAGCAGCAGTCAGGGCGGCTCGC 58
consensus_14405#2 ----GATTCGGCCGAGCTCGTGC---CGAAT-----TCGGCACGAGCCC---CAACTCGC 45
* ***** * * ** **** * *** ** * * *****
consensus_14405#0 CTACCTCCACGTCA--CGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAG 1018
consensus_14405#1 ATACCTCCACGTCA--CGCAGCCACGGTACACCGCCTACGGGCAGACCGAGTCTGGGCAG 116
consensus_14405#2 CATTTTCCCCGTCTTCCACAGTGACAAC-CACCACCC-CAGGCTTTCCCCTTCCTCCTCG 103
*** **** * *** ** **** ** * *** ** ** *
consensus_14405#0 CATGGCAGTGCCGAGGAGGAGAG--CCGCCTGATGCGCACCCTCCGGGGCACGTACCAGG 1076
consensus_14405#1 CATGGCAGTGCCGAGGAGGAGAG--CCGCCTGATGCGCACCCTCCGGGGCACGTACCAGG 174
consensus_14405#2 CGATCCAACAACGGGAGANATNGATCGGCCGCCNCCGGATCNNCANCGGCAGAAGCAGGC 163
* ** ** * * * * *** ** * * * **** * *
consensus_14405#0 GCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCG 1136
consensus_14405#1 GCACATTCATGTGCAGTGGCGGCTACACGCGGGAGCTTGGGTTGGAAGCAGTGGAGAGCG 234
consensus_14405#2 GCCGCTCTTCTCGCCGTACCAGATGCCCC-----GCTTCCGCCTCAACCACCGGGTGGTG 218
** * ** ** * * * * * **** * ** ** ** * *
consensus_14405#0 GCGATGCCGAC--CTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGA 1194
consensus_14405#1 GCGATGCCGAC--CTGGTGTCGTACGGGCGGCTCTTCATATCAAACCCGGACCTGGTCGA 292
consensus_14405#2 CTGGCGCCGATGACCGGTGCAAGGCGATCGGNGG--GGTGCCCGGCCCGGCGCTGGCGGA 276
* ***** * **** ** *** * * ***** **** **
consensus_14405#0 GCGGTTCA---GGCTGAACGCCGGGCTGAACAAGTACGTGCGTAAGACATTCTACACGCC 1251
consensus_14405#1 GCGGTTCA---GGCTGAACCCCGGGTTGAACAAGTACGTGCGTAAGACATTTTACACGCC 349
consensus_14405#2 ATNCTACGCTCANCGGACACCCAGGGTGGCCTGCTCTTCTCCNAAGGCACCGTCNTCTCN 336
* * * ** ** ** ** * * * *** ** * * *
consensus_14405#0 CGATCCTGTCGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCG--CGGATG 1309
consensus_14405#1 CGATCCTGTGGTGGGTTACACGGACTATCCGTTCCTCGGACAGCCTAAGTCG--CGGATG 407
consensus_14405#2 CCCGCTGGCCCGGGGTTTCCTCA--TGTCCCTGGGATATACNATCCANANCAGACTGATG 394
* * * ***** * * *** * ** * * * * ****
consensus_14405#0 TAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAG 1369
consensus_14405#1 TAAATGTACTGCGGGATAAGTAAATCAAGGATACGATTGTGTATTGTAAGGAAAATAAAG 467
consensus_14405#2 CTGGAAAAAAGTGGTGGATGCTGTTCATGCCAAGGGAGGCATCTTTTTCTGCCANTTNTG 454
* * ** * * *** * * * * * ** * * * * *
consensus_14405#0 GGCAACGGTGAGGTGATTTAGCTTATTTTTGGGACCTAATTTGACGGTAATTTATTCTTT 1429
consensus_14405#1 GGCAACGGTGAGGTGATTTAGCTTATTTTTGGGCCCTAATTTGACGGTAATTTATTCTTT 527
consensus_14405#2 GCATGTNGGCAGAACTTCTCNCCAANTNTNCCANCCNAAC--GGTGNTGNNC-------- 504
* * ** * * * * * * ** ** * * *
consensus_14405#0 CACCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAAACCTTG 1489
consensus_14405#1 CCCCAAATCTGATATGATCCATTGCTGATTCAGTAGCTACTCTAGCCTATGTAACCCTTG 587
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GGTCATCAGCACAGATTGTATCTATATGTGTATTGCATAATGTTTCATATCAGTTGTCTA 1549
consensus_14405#1 GGTCATCAGCACAGATTGTATAGATATGTGTATTGCATAATGTTTCATAAAAAAAAAAAA 647
consensus_14405#2 ------------------------------------------------------------
consensus_14405#0 GCAGATTTATGCATCGTACCAGTTAGTAACTGTTATTTTGATGGGAAAAAAAAAA 1604
consensus_14405#1 AAGG--------------------------------------------------- 651
consensus_14405#2 -------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||