cluster # 14414

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Oryza sativa
cluster # 14414 cluster # 14414 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14414#0 length = 1433 sequences # 7

consensus_14414#1 length = 873 sequences # 7
consensus_14414#2 length = 484 sequences # 2

consensusID : consensus_14414#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1433
fasta sequence

                              [GGTCGGCTCGCGATCGCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCCGCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGCGGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCACGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGACCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGGCGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTCCTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTACACCGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGATTCCAAGTGGCAGGCACCGGCATACTGCTTCAACGATCAAGAAGCCGCCACAAATTCCGACACCGCCAACGACAATGAAGACGGTGAGGTCGATGCGATGAGCAGCCTCCTCAAGTTCTTCAGGGCTCAGCAAACAGCCGTGGCAGCAGTATGACTATGAGCAAGACTTATCACTTATGAGAATCTTACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTATCTACATTCGTATATATGTTAATATTAACATCTACATGAATATGGGTAATGCTAGAAAGTTAGGGGCTGTTTGGATGACTTCCCTAGTTTACCACAAAATATTTGGCAAAGTGTGGCATGCCATACATTGTATAGCTAAGAATTTGTTGGCAACAATCGTGGCAAGTTATGGCAAAAAAAAATTACTCAATGACAAGTGGGCTAGCTTGCT-AAAAAATTGTGGCATAACTCACTTGTGGCATGAAACAACCACTAGGCTTAATTGGTCAAACTTGATTGCCACAACTTTGGCAAAGGTTGGCACTCAACCAAACAACCCCTTATAACCTGAAACGGAGGTAGTAGCAATTATCCATTGGCGGTCTGGTCCAGTCTGTTCTTGGATCATGTTGTAATAATGCATAAAAAGCGTTTATGTATATACTCCCCTTTTATGTAACCAAGTTTGTTAGTTCAATCTTGAACTAACCAACCTCATATATTAGAGGATGGAGGTCAATAAGTTCGCAAGTGATGAATCTCAAAATAAAAACAGTAAGGACATGCAGAGTAACATACTGATGGTATGTATGTAATCACGACCAGAAAATTTTTGAAGTACGGTGTGCATCTAAAAA]

[+] EMBL AK071758             [GGTCGGCTCGCGATCGCACAGCCGGAGACCAAATCGGATAAGCTCGCCGGAGTAATCGCCGCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGCGGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCACGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGACCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGGCGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTCCTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTACACCGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGATTCCAAGTGGCAGGCACCGGCATACTGCTTCAACGATCAAGAAGCCGCCACAAATTCCGACACCGCCAACGACAATGAAGACGGTGAGGTCGATGCGATGAGCAGCCTCCTCAAGTTCTTCAGGGCTCAGCAAACAGCCGTGGCAGCAGTATGACTATGAGCAAGACTTATCACTTATGAGAATCTTACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTATCTACATTCGTATATATGTTAATATTAACATCTACATGAATATGGGTAATGCTAGAAAGTTAGGGGCTGTTTGGATGACTTCCCTAGTTTACCACAAAATATTTGGCAAAGTGTGGCATGCCATACATTGTATAGCTAAGAATTTGTTGGCAACAATCGTGGCAAGTTATGGCAAAAAAAAATTACTCAATGACAAGTGGGCTAGCTTGCT AAAAAATTGTGGCATAACTCACTTGTGGCATGAAACAACCACTAGGCTTAATTGGTCAAACTTGATTGCCACAACTTTGGCAAAGGTTGGCACTCAACCAAACAACCCCTTATAACCTGAAACGGAGGTAGTAGCAATTATCCATTGGCGGTCTGGTCCAGTCTGTTCTTGGATCATGTTGTAATAATGCATAAAAAGCGTTTATGTATATACTCCCCTTTTATGTAACCAAG                                                                                                                                                                             ]
[+] EMBL CB669815             [             TCGCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCCGCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGCGGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCACGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGACCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGGCGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTCCTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTACACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA756171             [              CGCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCCGCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGCGGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCACGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGACCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGGCGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTCCTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGGACTTCTACACCGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGA TCCCAGTGGCAGGCACCGGCATACTGCTTCAACGATtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C73553               [               GCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCCGCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGCGGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCACGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGACCTCTACTACGACTNGCCTGGGGGGCGCAACCTCAACCTCGTNGCCGGCCAGCTCTTCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CK085223             [                                                                                                                                                                                                                                                       TAAGACTGGCCTGGGGGGAGCAACCTCAAACTCGTCGCCGGCCAGCTCTCCGGCGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTCCTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU075684             [                                                                                                                                                                                                                                                                                                                                                 TCCTACTA TTCGACTCCGCNT CTGCCGCACCTT CTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTACACCGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGATTCCAAGTGGCAGGCACCGGCATACTGCTTCAACGATCAAGAAGCCGCCACAAATTCCGACACCGCCAACGACAATGAAGACGGTGAGGTCGATGCGATGAGCAGCCTCCTCAAGTTCTTCAGGGCTCAGCAAACAGCCGTGGCAGCAGTATGACTATGAGCAAGACTTATCACTTATGAGAATCTTACTTCCTCCGTTTCATATTATAAGACTTTCTAGCATTATCTACATTCGTATATATGTTAATATTAACATCTACATGAATATGGGTAATGCTAGAAAGTTAGGGGCTGTTTGGATGACTTCCCTAGTTTACCACAAAATATTTGGCAAAGTGTGGCATGCCATACATTGTATAGCTAAGAATTTGTTGGCCACAATCGTGGCAAGTTATGGCAAAAAAAAATTACTCAATGACAAGTGGGCTAGCTTGCT AAAAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI813389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACAAGT GGCTAGCTTGCTAAAAAAATTGTGCCATAACTCACTTGTGGCATG AACCACCACTAGACTTAATT GTCAAACTTGATTGCCACAACTTTGGCAAAGGTT GCACTCAACC AACAACCCCTTATAACCTGAAACGGAGGTAGTAGCAATTATCCATTGGCGGTCTGGTCCAGTCTGTTCTTGGATCATGTTGTAGTAATGCATAAAAAGCGTTTATGTATATACTCCCCTTTTATGGTATGACGTTTGTTAGTTCAATCTTGAACTAACCAACCTCATATATTAGAGGATGGAGGTCAATAAGTTCGCAAGTGATGAATCTCAAAATAAAAACAGTAAGGACATGCAGAGTAACATACTGATGGTATGTATGTAATCACGACCAGAAAATTTTTGAAGTACGGTGTGCATCTAAAAA]




>consensus_14414#0
GGTCGGCTCGCGATCGCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCC
GCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGC
GGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCA
CGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGA
CCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGG
CGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTC
CTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGC
CGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGCCACGTCTGGACCAAGGTCGA
CTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTACAC
CGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGATTCCAAGTG
GCAGGCACCGGCATACTGCTTCAACGATCAAGAAGCCGCCACAAATTCCGACACCGCCAA
CGACAATGAAGACGGTGAGGTCGATGCGATGAGCAGCCTCCTCAAGTTCTTCAGGGCTCA
GCAAACAGCCGTGGCAGCAGTATGACTATGAGCAAGACTTATCACTTATGAGAATCTTAC
TTCCTCCGTTTCATATTATAAGACTTTCTAGCATTATCTACATTCGTATATATGTTAATA
TTAACATCTACATGAATATGGGTAATGCTAGAAAGTTAGGGGCTGTTTGGATGACTTCCC
TAGTTTACCACAAAATATTTGGCAAAGTGTGGCATGCCATACATTGTATAGCTAAGAATT
TGTTGGCAACAATCGTGGCAAGTTATGGCAAAAAAAAATTACTCAATGACAAGTGGGCTA
GCTTGCTAAAAAATTGTGGCATAACTCACTTGTGGCATGAAACAACCACTAGGCTTAATT
GGTCAAACTTGATTGCCACAACTTTGGCAAAGGTTGGCACTCAACCAAACAACCCCTTAT
AACCTGAAACGGAGGTAGTAGCAATTATCCATTGGCGGTCTGGTCCAGTCTGTTCTTGGA
TCATGTTGTAATAATGCATAAAAAGCGTTTATGTATATACTCCCCTTTTATGTAACCAAG
TTTGTTAGTTCAATCTTGAACTAACCAACCTCATATATTAGAGGATGGAGGTCAATAAGT
TCGCAAGTGATGAATCTCAAAATAAAAACAGTAAGGACATGCAGAGTAACATACTGATGG
TATGTATGTAATCACGACCAGAAAATTTTTGAAGTACGGTGTGCATCTAAAAA

consensusID : consensus_14414#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 873
fasta sequence

                              [GTGGGCTGAGAGTGGCTGCTCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTATTACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCCACCTCTGGACCAAGGTCGACATCGTCTGGTACTACGAGGACGTCG-TCACCCACCGCCCCGTTCGCTGGAACTTCTT-CAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGT-GGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTGTGCTAATAAAAAAAAA]

[+] EMBL CF337585             [GTGGGCTGAGAGTGGCTGCTCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTATTACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCG CCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACT GCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCCACCTCTGGACCAAGGTCGACATCGTCTGGTACTACGAGGACGTCG TCACCCACCGCCCCGTTCGCTGGAACTTCTT CAATGGTATGCAGCAGCATGTGATGAGCTTC A GTGGGTGGGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGT                                                                                                                                                                                                                                                        ]
[+] EMBL CF337593             [GTGGGCTGAGAGTGGCTGCTCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTA TACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCCACCTCTGGACCAAGGTCGACATCGTCTGG ACTACGAGGACGTCG TCACCCACCGCCCCGTTCGCTGGAACTTCTT CAATGGTATGCAGCAGCA                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK099833             [       GAGAGTGGCTGCTCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTATTACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCCACCTCTGGACCAAGGTCGACATCGTCTGGTACTACGAGGACGTCG TCACCCACCGCCCCTTTCGCTGGAACTTCTT CAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGT GGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTG                ]
[+] EMBL C73726               [                       CTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTATTACGACTNGCCGCGGGGG GCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTNCTACTTCTTCAACGGCAACTTCTGCCGCAACAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA753241             [                                                                                                                                                   gGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGACCTCTACTACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACTGGCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCCACCTCTGGACCAAGGTCGACATTGTCTGGTACTACGAGGACGTCG TCACCCACCGCCCCGTTCGCTGGAACTTCTT CAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGT GGAGTTCTTGAGGACTCCAAA                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF337594             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     GACATCGTCTGGTACTACGAGGACGTCGTTCACCCACCGCCCCGTTCGCTGGAACTTCTTNCAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGT GGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTGTGCTAATAAAAAAAAA]
[-] EMBL CF337586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCAGCATGTGATGAGCTTCGAGGTGGGT GGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTGTGCTAATAAAAAAAAA]




>consensus_14414#1
GTGGGCTGAGAGTGGCTGCTCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGC
TCCGCCTTCTCCCGCTCCTCCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCC
CGACGCCGTGGCCGGAGCAGTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCG
GCCGGCTGCAGCTGATCGACCTCTATTACGACTGGCCGCGGGGGCGCAACCTCAACCTCA
TCCGCGGCCAGCTCTCCGGCGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCT
ACTTCTTCAACGCCACCTCCTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCG
ACTGGCTCGCCGCCGGCGCCGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGCC
ACCTCTGGACCAAGGTCGACATCGTCTGGTACTACGAGGACGTCGTCACCCACCGCCCCG
TTCGCTGGAACTTCTTCAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGAG
TTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCA
TCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGC
TCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTT
CAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAAT
CCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGC
AATATGAAAATGTTGTGTGCTAATAAAAAAAAA

consensusID : consensus_14414#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 484
fasta sequence

                              [TCCGCTGGAACTTCTTCAATGCTAATTCGATGGTTGATATCGTCTTGCTTAGAAGCTGGCAGAGATGCAATGCATAATTTCAGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTGTGCTAAAAAGACCAGAGAATCGTCAAGTTTGGTTCCAAAAAAAAAA]

[+] EMBL C99509               [TCCGCTGGAACTTCTTCAATGCTAATTCGATGGTTGATATCGTCTTGCTTAGAAGCTGGCAGAGATGCAATGCATAATTTCAGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGAGTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAGCAATATGAAAATGTTGTGTGCTAAAAA                                     ]
[+] EMBL BI805879             [                                                                                                                                                                                       tCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCCCTGATGACCTGCTCAATCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACCAACGTTTNTGAACTTCAGCAATATGAAAATGTTGTGTGCTAATATGACCAGAGAATCGTCAAGTTTGGTTCCAAAAAAAAAA]




>consensus_14414#2
TCCGCTGGAACTTCTTCAATGCTAATTCGATGGTTGATATCGTCTTGCTTAGAAGCTGGC
AGAGATGCAATGCATAATTTCAGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGA
GTTCTTGAGGACTCCAAATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTC
ATCGCCGATCCCGGTGCAGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAG
CTCGATGTGATGAACGCCTTCTTCAGGTTTGTAGGAGCTCCAGCAGCAGCAGCAGCAGCT
TCAGTATGAGCAAGGCTTACTTTTCACTGATGAGAATGTCACCATTGATGACCTGCTCAA
TCCACTCTGTTTCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTCTGAACTTCAG
CAATATGAAAATGTTGTGTGCTAAAAAGACCAGAGAATCGTCAAGTTTGGTTCCAAAAAA
AAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14414#1      -----------------------------------------GTGGGCTGAGAGTGGCTGC 19
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      GGTCGGCTCGCGATCGCACAGCCGGAGACCGAATCGGATAAGCTCGCCGGAGTAATCGCC 60
                                                                                   

consensus_14414#1      TCTGCTCCGTCCCTCGCTCACCAAACGGATAATGCCGCCGCTCCGCCTTCTCCCGCTCCT 79
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      GCCGATGCCACCGCCGCCGCCGCCGCTCCTCTTGGCCGCGGCCGTTCTCGCTTCGGCGGC 120
                                                                                   

consensus_14414#1      CCTCCTCGCCGCCGCCGCCGCAGCACTCGACCCCCCGACCCCGACGCCGTGGCCGGAGCA 139
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      GGCGGCACTCGCTGACCCTCCTCCCCCTCCGTCCCCGACGCCGTGGCCGGAGCGGTTCCA 180
                                                                                   

consensus_14414#1      GTTCCACGCGGTGGTATTCACCAACCTCACGGGGAGCGGCGGCCGGCTGCAGCTGATCGA 199
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      CGCGGTGCTTTTCACGAACCTGACCCAGACGAGCGGCGGCGGGAAGCTGCAGATGACCGA 240
                                                                                   

consensus_14414#1      CCTCTATTACGACTGGCCGCGGGGGCGCAACCTCAACCTCATCCGCGGCCAGCTCTCCGG 259
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      CCTCTACTACGACTGGCCTGGGGGGCGCAACCTCAACCTCGTCGCCGGCCAGCTCTCCGG 300
                                                                                   

consensus_14414#1      CGACCCGACCTACGACGTCGAGTGGACCAATGGCACCTCCTACTTCTTCAACGCCACCTC 319
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      CGACCCGGTCTACGACGTCGAGTGGACCAACGGCACCTCCTACTACTTCGACTCCGCCTC 360
                                                                                   

consensus_14414#1      CTGCCGCACCAAGCTGTTCCCCGTCGGCCTCCTGCCCCCCGACTGGCTCGCCGCCGGCGC 379
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      CTGCCGCACCTTGCTGTTCCCCGTCGGCATCCTGCCCCCCGACTGGCTCGCCGCCGGCGC 420
                                                                                   

consensus_14414#1      CGTCTACCTCGGCCGCGAGACCGTCGCCGGCTTCGACTGC--CACCTCTGGACCAA-GGT 436
consensus_14414#2      --------------------------TCCGCTGGAACTTCTTCAATGCTAATTCGATGGT 34
consensus_14414#0      CGCCTACCTCGGCCGCGAGGCCGTTGACGGCTTCGACTGC--CACGTCTGGACCAA-GGT 477
                                                  * ***   *** *  **   **    * * ***

consensus_14414#1      CGACATCGTCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTTCGCTGGAACTTCTT 496
consensus_14414#2      TGATATCGTCTTGC-TTAGAAGCTGGCAGAGATGCAATGCAT----------AATTTC-- 81
consensus_14414#0      CGACTTCATCTGGTACTACGAGGACGTCGTCACCCACCGCCCCGTCCGCTGGAACTTCTA 537
                        **  ** *** *   **  **   *  *  *  **  **            ** ***  

consensus_14414#1      CAATGGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGAGTTCTTGAGGACTCCAA 556
consensus_14414#2      ----AGTATGCAGCAGCATGTGATGAGCTTCGAGGTGGGTGGAGTTCTTGAGGACTCCAA 137
consensus_14414#0      CACCGGGATGCAGCAGCATGTGATGAGCTTTGAGGTGGGTGGAGCCCTAGAGGATTCCAA 597
                            * *********************** *************  ** ***** *****

consensus_14414#1      ATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGC 616
consensus_14414#2      ATGGCAGGCGCCGGCTCGCTGCTTCAGCGATCAACACACCGTCATCGCCGATCCCGGTGC 197
consensus_14414#0      GTGGCAGGCACCGGCATACTGCTTCAACGATCAAGAAGCCGCCA---CAAATTCCGA--- 651
                        ******** *****   ******** ******* *  *** **   *  ** ***    

consensus_14414#1      AGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGC 676
consensus_14414#2      AGCCACCGTCACCGACGACAGGGTAGAAGGTGAGGATGGCAAGCTCGATGTGATGAACGC 257
consensus_14414#0      ---CACCGCCAACGACAA------------TGAAGACGGTGAGGTCGATGCGATGAGCAG 696
                          ***** ** **** *            *** ** **  ** ****** ***** *  

consensus_14414#1      CTTCTTCAGGTTTGTAGGAGCTCC---AGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAG 733
consensus_14414#2      CTTCTTCAGGTTTGTAGGAGCTCC---AGCAGCAGCAGCAGCAGCTTCAGTATGAGCAAG 314
consensus_14414#0      CCTCCTCAAGTTCTTCAGGGCTCAGCAAACAGCCGTGGCAGCAGTATGACTATGAGCAAG 756
                       * ** *** ***  *  * ****    * **** *  *******  * * **********

consensus_14414#1      GCTTACTTTTCACTGATGAGAATGTCAC--CATTGATGACCTGCT-CAATCCACTCTGTT 790
consensus_14414#2      GCTTACTTTTCACTGATGAGAATGTCAC--CATTGATGACCTGCT-CAATCCACTCTGTT 371
consensus_14414#0      ACTTA----TCACTTATGAGAATCTTACTTCCTCCGTTTCATATTATAAGACTTTCTAGC 812
                        ****    ***** ******** * **  * *   *  * *  *  **  *  ***   

consensus_14414#1      TCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTC--TGAACTTCAGCAATATGAA 848
consensus_14414#2      TCTTCCTGAATCCTGTTGTCATGTGTAAACAAACGTTTC--TGAACTTCAGCAATATGAA 429
consensus_14414#0      ATTATCTACATTC-GTATATATGTTAATATTAACATCTACATGAATATGGGTAATGCTAG 871
                         *  **  ** * **    ****  * *  *** * *   ****  *  * ***   * 

consensus_14414#1      AATGTTGTGTGCTAATAAAAAAAAA----------------------------------- 873
consensus_14414#2      AATGTTGTGTGCTAAAAAGACCAGAGAATCGTCAAGTTTGGTTCCAAAAAAAAAA----- 484
consensus_14414#0      AAAGTTAGGGGCTGTTTGGAT----GACTTCCCTAGTTTACCACAAAATATTTGGCAAAG 927
                       ** ***  * ***      *                                        

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      TGTGGCATGCCATACATTGTATAGCTAAGAATTTGTTGGCAACAATCGTGGCAAGTTATG 987
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      GCAAAAAAAAATTACTCAATGACAAGTGGGCTAGCTTGCTAAAAAATTGTGGCATAACTC 1047
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      ACTTGTGGCATGAAACAACCACTAGGCTTAATTGGTCAAACTTGATTGCCACAACTTTGG 1107
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      CAAAGGTTGGCACTCAACCAAACAACCCCTTATAACCTGAAACGGAGGTAGTAGCAATTA 1167
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      TCCATTGGCGGTCTGGTCCAGTCTGTTCTTGGATCATGTTGTAATAATGCATAAAAAGCG 1227
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      TTTATGTATATACTCCCCTTTTATGTAACCAAGTTTGTTAGTTCAATCTTGAACTAACCA 1287
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      ACCTCATATATTAGAGGATGGAGGTCAATAAGTTCGCAAGTGATGAATCTCAAAATAAAA 1347
                                                                                   

consensus_14414#1      ------------------------------------------------------------
consensus_14414#2      ------------------------------------------------------------
consensus_14414#0      ACAGTAAGGACATGCAGAGTAACATACTGATGGTATGTATGTAATCACGACCAGAAAATT 1407
                                                                                   

consensus_14414#1      --------------------------
consensus_14414#2      --------------------------
consensus_14414#0      TTTGAAGTACGGTGTGCATCTAAAAA 1433