cluster # 14417

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14417 cluster # 14417 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14417#0 length = 2482 sequences # 15

consensus_14417#1 length = 393 sequences # 1

consensusID : consensus_14417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2482
fasta sequence

                              [ATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATATTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAACCTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCACTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACATTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGCATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGT-GATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATGAAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCCAACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGGCAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTTAAATGAAAGTCCCCATCGGATAAAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCACGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTTAGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTTTTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA-CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATTGTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAAAAAAAAACTGGAAACATTTCCTGAAATCTGACGCTTGCTTGATCTTTGTGCCTTAATAAATTTGCTCTCTCCAACCATAGATTTATTTTCTTCAAAAAAAAA]

[+] EMBL AK064566             [ATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATATTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAACCTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCACTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACATTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGCATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTCGGCTATTGCAATCTGCTAGACACAGCTTGGCACATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGT GATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATGAAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCCAACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGGCAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTTAAATGAAAGTCCCCATCGGATAAAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCACGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTTAGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTTTTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTAGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTC                                                                                                                                                                  ]
[+] EMBL CB666699             [                                                                                                                                                                                                                                                                                                      AAGGGCATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGT GATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATGAAGTTTGCTGCAATCAAATTCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB665733             [                                                                                                                                                                                                                                                                                                                                      GAGTNNTCTACCCCTTGTGATGATACATCCCTTATGTTGATTGCTGTACGGCGCCTTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGT GATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTATCCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAGTATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAGAAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGAGCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGGAATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU162328             [                                                                                                                                                                                                                                                                                                                                                                    CTTATGTTGATNGCTGTACGGCGTATTGGAATCACNCCTGTAGTTTTGGTACCGTTGCATGACAGAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCNGCTAGACACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTTCTACTGATTGCCCCAGTGGTCNGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAATGGTTCATNGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAGTGTTATACCACAGTGGATAGTAGAACACTGTTGGTGCTGAGAACNGGGTTAACCAGTGTATCCTGNTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCAAGTGCGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF323105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATAACCTGTTTGAAGACGTATGCATCACGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTTATGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTTTTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAAC ACAGCACGATGTTCTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF312455             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTCTTGCCCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB626657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGAAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTGTGCCCAGTGAAAGGAACAACCCTCGTGAACGC                                                                                                                                                          ]
[-] EMBL CB666700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCG GAACG                                                                                                                                                           ]
[-] EMBL CB666653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAAaaaaga                                                                                                                                                ]
[-] EMBL CB665734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTACATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTAAAGCATTGGCTTCCAATTGATGATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTGGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAAaaaaagga                                                                                                                                              ]
[+] EMBL CB096263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTCCAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGAAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATATGGATACAAATCCTTTTGNCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATTGNGGTATATGTCAACTT                                                                                                                             ]
[+] EMBL CB000227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAGAGTTTCGTCGCCGTGGTATCCCGTCGGGCGTACCGCCCATTCTGGATGGCGACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATTGTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAAAAAAAAA                                                                                               ]
[+] EMBL CA764414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACATGCTTGTGCAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGAAAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGAAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCCCGTGAACGCATAATCTCCATTGTGGTATATGTCAACTTGCT                                                                                                                          ]
[-] EMBL CF312454             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACAATCCATTCAACCCGGTCACTGTTCTTACCGA CATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCGAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATTGTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAATAGGGATCTGGAAACATTTCCTGAAATCTGACGCTTGCTTGATCTTTGTGCCTTAATAAATTTGCTCTCTCCAACCATAGATTTATTTTCTTCAAAAAAAAA]
[+] EMBL AU031098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCCATTCAACCCGGTCACTGTTCTTACCGATCATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGAGCACCGAGTTGTT NANCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCTCAGCTGTNGTGNNGTNCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATAGTGTGTCATTGCTCTNGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATGTGGATACAAATCCTTTTGCCNNGTGAAAGGAACAACCCTNGTGAACGNATAAaaaaaaa                                                                                                                                               ]




>consensus_14417#0
ATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATA
TTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAAC
CTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCA
CTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACA
TTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGC
ATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTA
TGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACA
GAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGAC
ACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTT
CTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAA
TGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAG
TGTTATACCACAGTGATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTAT
CCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCA
AGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAG
TATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAG
AAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGA
GCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGG
AATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATG
AAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCC
AACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGG
CAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTTAAATGAAAGTCCCCATCGGATA
AAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCA
CGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTT
AGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTT
TTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGC
CCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTAC
ATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGAT
GATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTG
GGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTC
CAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAG
TTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTGTG
CAGTTCCTGGAGCTCACCAGCGAACAACAGCACGATGTTCTCAATATTGTTTCTCCTGGA
AAGAAGAGGCAACACGATATCTCGGTTTTCCAGGTCATGCGAGCATTAGAGAGGGTGCAT
TACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGTTCTTACCGACAT
GGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTGGATCCGAGCCGA
GCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAACATACCAAATCT
CAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCTGATGTCGCAATA
GTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTTGGCAGAAGGATG
TGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGCATAATCTCCATT
GTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAAAAAAAAACTGGAAACATTTC
CTGAAATCTGACGCTTGCTTGATCTTTGTGCCTTAATAAATTTGCTCTCTCCAACCATAG
ATTTATTTTCTTCAAAAAAAAA

consensusID : consensus_14417#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 393
fasta sequence

                              [TTGGAGTCGGTATACAACTGNGTCGTCGCAAGCACTCTGNTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGCTGTCCAAGANAGACTTTCGGTTCACCCATTGACTGGTCCACTCTTAGGAAATGNTCATGCAGAGTTTCGTCGTCGTGGTATCCCGTCGNGAGTACCGACCATTATGNATGGCGACATGCTTGGTGCAGTTCCTGGTAGCTCACCAGCGAACAACAGCACGGTGTTTCTCAATTTTGTTTCTCCTTGGANAAGAAGAGGGCAACACGGNTATCTCGNTTTTTTCCAGGGTCATGNGAGGCCATTAGAGAGGGGTNGCAATTNCGGAATTCAANCTGAGGGCGGTTNAAACAATTCC]

[+] EMBL OSC20761             [TTGGAGTCGGTATACAACTGNGTCGTCGCAAGCACTCTGNTGGGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGCTGTCCAAGANAGACTTTCGGTTCACCCATTGACTGGTCCACTCTTAGGAAATGNTCATGCAGAGTTTCGTCGTCGTGGTATCCCGTCGNGAGTACCGACCATTATGNATGGCGACATGCTTGGTGCAGTTCCTGGTAGCTCACCAGCGAACAACAGCACGGTGTTTCTCAATTTTGTTTCTCCTTGGANAAGAAGAGGGCAACACGGNTATCTCGNTTTTTTCCAGGGTCATGNGAGGCCATTAGAGAGGGGTNGCAATTNCGGAATTCAANCTGAGGGCGGTTNAAACAATTCC]




>consensus_14417#1
TTGGAGTCGGTATACAACTGNGTCGTCGCAAGCACTCTGNTGGGGAGTATCTTTGTTATG
ATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGCTGTCCAAGANAGACTTTCGGTT
CACCCATTGACTGGTCCACTCTTAGGAAATGNTCATGCAGAGTTTCGTCGTCGTGGTATC
CCGTCGNGAGTACCGACCATTATGNATGGCGACATGCTTGGTGCAGTTCCTGGTAGCTCA
CCAGCGAACAACAGCACGGTGTTTCTCAATTTTGTTTCTCCTTGGANAAGAAGAGGGCAA
CACGGNTATCTCGNTTTTTTCCAGGGTCATGNGAGGCCATTAGAGAGGGGTNGCAATTNC
GGAATTCAANCTGAGGGCGGTTNAAACAATTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14417#0      ATAATTCATCTTCTAGTTGTGCAACGAGTGGTGATTTTCGGAAAGATTTTGCAGCTAATA 60
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TTCGCAAGTTTGCTGTAATTGGAACTCACGAACCTTCTGTGCATATCATTTCGTTGGAAC 120
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CTGGAGAAGCATTTCAGCAACTTGCTGTTGGGCATATATCAGTAAACAACGCGCTCGGCA 180
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CTCCTATCAGTGGTTGTATACCTGAAAATGTTAGGTTTGTAGCAGCTGCAAGGTTCTACA 240
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TTCTTGCAGGACTAAGGAATGGAATGCTACTGAGGTTTGAGTCACAAACAAGCAAAGGGC 300
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      ATTGTTTCCCTGGTTCCTTTTACAAGGAGTCCTCTACCCCTTGTGATGATACATCCCTTA 360
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TGTTGATTGCTGTACGGCGTATTGGAATCACTCCTGTAGTTTTGGTACCGTTGCATGACA 420
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GAGCCAATGCTGACATTATTGTTCTCGGTGATAGGCCTTGGCTATTGCAATCTGCTAGAC 480
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      ACAGCTTGGCATATTCATCCATCTCATTTCTGCCTGCTTCCCATGTGACACCAGTGTCTT 540
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CTACTGATTGCCCCAGTGGTCTGCTGTTTGTTTCGGAGAACTGTTTGCATTTGGTTGAAA 600
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TGGTTCATGGCAAAAGACTAAATGCACAGAAGTTTTCGATTGGAGGGACTCCAAGGAAAG 660
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TGTTATACCACAGTGATAGTAGAACACTGTTGGTGCTGAGAACTGGGTTAACCAGTGTAT 720
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CCTGTTCTTCAGATATTGTTCAAATAGATCCAAGTAATGGGGCATTGCTTTCCAGATTCA 780
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AGTGCGAACCTGGTGAAACAGCAAAATGCATGCAAATTGCAAAGATAGGGAATGATCAAG 840
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TATTAATCGTTGGAACTAGTAAGTCCAATGGCCGACCAATGATGCCAAACGGTGAAGCAG 900
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AAAGTATCAAGGGTCGTCTAATTCTTTTAAGCTTGGAGACTATTGAAAGTCCTCGTGAGA 960
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GCGGTTCGTTTACTGCAGCTTCTAATTTGAATTCATCTCATGCTGGTTCTCCATTCCCGG 1020
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AATTTGTTGGATATGCAGCAGAGGAGCTGTCTAGTAACAGCATGTGCAGCAGTCCTGATG 1080
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AAGTTTGCTGCAATCAAATTCAACCTGAACTCATGGCAGGCCATTTGAGATCACTAGTCC 1140
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AACATACATTCAATGGCGCTGTTCTTGCTGTACATCCATATCTAGATAGATATGTGTTGG 1200
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CAGCAGCTGGAAATGTGCTTTTTGTATTTGGATTTTTTAAATGAAAGTCCCCATCGGATA 1260
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AAAAAGTATACTACGAGTAGGACACGATTTACAATAACCTGTTTGAAGACGTATGCATCA 1320
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CGGATTGCAGTGGGTGATTGCCGCGATGGTGTTCTCTTCTATTCTTATCATGAGAATCTT 1380
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      AGGAAGTTGGAACTGATCTATTCTGATCCTGCCCAACGGCTAGTGGGTGATGTTGCCCTT 1440
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TTGAGCTGTGAAACTGCTGTTGTATCAGATCGACGAGGGAGCATATCTGTACTGTCTTGC 1500
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CCAAGATTAGAAGTATCCGAAAGTCCAGAGAAGAACCTAGCGGTGCATTGTTCATTTTAC 1560
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      ATGGGTGAAACAGCTATGAGCATCCAGAAGGTTGCATTTAAGCATTGGCTTCCAATTGAT 1620
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GATTTGACAGAACCAGTGTTGGAGTCGGTATACAACTGTGTCGTCGCAAGCACTCTGCTG 1680
consensus_14417#1      ------------------TTGGAGTCGGTATACAACTGNGTCGTCGCAAGCACTCTGNTG 42
                                         ******************** ****************** **

consensus_14417#0      GGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGATGTC 1740
consensus_14417#1      GGGAGTATCTTTGTTATGATTCCACTCACAAGTGAGGAGCATCAAATGTTGCAAGCTGTC 102
                       ******************************************************* ****

consensus_14417#0      CAAGAAAGACTTTCGGTTCACCCATTGACTGCTCCACTCTTAGGAAATGATCATGCAGAG 1800
consensus_14417#1      CAAGANAGACTTTCGGTTCACCCATTGACTGGTCCACTCTTAGGAAATGNTCATGCAGAG 162
                       ***** ************************* ***************** **********

consensus_14417#0      TTTCGTCGCCGTGGTATCCCGTCGGGAGTACCGCCCATTCTGGATGGCGACATGCTTG-T 1859
consensus_14417#1      TTTCGTCGTCGTGGTATCCCGTCGNGAGTACCGACCATTATGNATGGCGACATGCTTGGT 222
                       ******** *************** ******** ***** ** *************** *

consensus_14417#0      GCAGTTCCTGG-AGCTCACCAGCGAACAACAGCACGATGTT-CTCAATATTGTTTCTCCT 1917
consensus_14417#1      GCAGTTCCTGGTAGCTCACCAGCGAACAACAGCACGGTGTTTCTCAATTTTGTTTCTCCT 282
                       *********** ************************ **** ****** ***********

consensus_14417#0      --GGAAAGAAGAGG-CAACACG-ATATCTCGGTTTTCC---AGGTCATGCGAG--CATTA 1968
consensus_14417#1      TGGANAAGAAGAGGGCAACACGGNTATCTCGNTTTTTTCCAGGGTCATGNGAGGCCATTA 342
                         *  ********* *******  ******* ****      ******* ***  *****

consensus_14417#0      GAGAGGGTGCATTACGCACTCAACTGAGGCGTTCAACAATCCATTCAACCCGGTCACTGT 2028
consensus_14417#1      GAGAGGG-GTNGCAATTNCGGAATTCAANCTGAGGGCGGTTNAAACAATTCC-------- 393
                       ******* *    *    *  ** * *  *      *  *  *  ***  *         

consensus_14417#0      TCTTACCGACATGGCTGTCTCCAACCTGCTGATATTTGGGTGGCATCATCGCTGAATTTG 2088
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GATCCGAGCCGAGCACCGAGTTGTTGCAGCTGAAGCTGCTACTGGAGCACATACCCAGAA 2148
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CATACCAAATCTCAGCTGTAGTGAGGTGCTGTGTTTTGCTGTGGGATGATAGGCCCATCT 2208
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GATGTCGCAATAGTGTGTCATTGCTCTAGTGCAATCTTTGTAAATAACGAATAATATTTT 2268
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      GGCAGAAGGATGTGGATACAAATCCTTTTGCCCAGTGAAAGGAACAACCCTCGTGAACGC 2328
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      ATAATCTCCATTGTGGTATATGTCAACTTGCTTCAGGTTATGCCAGTTGAAAAAAAAAAC 2388
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      TGGAAACATTTCCTGAAATCTGACGCTTGCTTGATCTTTGTGCCTTAATAAATTTGCTCT 2448
consensus_14417#1      ------------------------------------------------------------
                                                                                   

consensus_14417#0      CTCCAACCATAGATTTATTTTCTTCAAAAAAAAA 2482
consensus_14417#1      ----------------------------------