Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14438 cluster # 14438       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14438#0 length = 2092 sequences # 12  
consensus_14438#1 length = 2040 sequences # 3  
consensus_14438#2 length = 481 sequences # 1  

consensusID : consensus_14438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2092
fasta sequence
                              [GAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGAGCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTTCGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATAGCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCCCAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCTCTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAACGCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACACGAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG-AGCCAAATTTATCATGGCAAGA-AAGAAAGAAAGACGGGGTGCATTATTGATCACAT-TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA-ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC-ACCACCTGATTTTTGACACAGGATGTAATTACTCTGTA-ATGGTGACACCATCATTATTCAATCATCATTCATGCATATTCATGATGTTCAAAAA]

[+] EMBL AK058719             [GAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGAGCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTTCGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATAGCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGGGCTTTCCCAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCTCTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAACGCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACACGAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGATCACAT TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATG ACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCACCTGATTTTTGACACAGGATGTAATTACTCTGTA ATGGTGACACCATCATTATTCAATCATC                            ]
[+] EMBL CB627823             [        TCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGAGCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTTCGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATAGCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCCCAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCTCTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAGGCCAATCCCCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGTGATGAATTTGAGTCTGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB683802             [                                                                                                                                                              GGTGCTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGAGCTCGGGGTGCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTTCGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATAGCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCCCAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCTCTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAACGCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCAAAAGCTGGGGAAGGGAAAGTCACTCTGTCCTCCATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB684551             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGATACGTGCTCTTAATGGAGAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGTGATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAACGCACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACACGAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB666032             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGTGCTGAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCATCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACACGAGCTTAATATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTGCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATANGCATCCA                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB683924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGAT                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB679592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTGATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGATCACAT TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCACCTGATTTTTGACACAGGATGTAATTACTCTGTA AGGGTGACACCATCATTATTCAATCATCATTCAT                      ]
[-] EMBL CB666033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAAGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGATCACAT TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCACCTGATTTTTGACACAGGATGTAATTACTCTGTA ATGGTGACACCATCATTATTCAATCAT                             ]
[-] EMBL CB678925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTACTACTGGAAAAGTTGTTCATGCCTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTGCTGCTGTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGTTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGATCACAT TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAACCCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGATGATGCTGTATTTTGATGTCCATACCAAGAGAGGAGCCAGCTGTTCCCTTTTTTTAGTTTGCC CTACACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCCCCGGATTTTTGACACAGGATGTAATTACTCTGTA ATGGTGACACCATCAAAAGTCAATCATCATTCATGCATATT               ]
[-] EMBL CB642638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGATGTTGTGGAGGCATTCAACCCAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTTTGCTTTTGTGACTGGTGCTTTAAAGGATGCCGGGGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGGGCATTATTGATCCCAT TGCTGTTGTTAGGGAAGAACAACAAACTGGTTACTTGATTGTAAATACGGCGAACTTATGCAAGCCATAGTTCAGTAGTCCCCAAACCTGAGGTTAGCCGTTTTTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGGGACAGGTGTTTCCTTTTTTTAGTTTGCCCCTA ACAGGTAGATAAGCAGGGTTGTTTAATTTTACGGGCCCCTGATTTTTGACCCAGGAGGTAATTACTTTGTA ATGGGGACCCCATCATTATTCAATCATCATTaaggg                    ]
[-] EMBL AI978531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGG AGCCAAATTTATCATGGCAAGA AAGAAAGAAAGACGGGGTGCATTATTGATCACAT TGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCACCTGATTTTTGACACAGGATGTAATTACTCT                                                            ]
[+] EMBL BI796807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAATCGGTAGCCGAATTTATCATGGCAAGATAAGAAAGAAAGACGGGGTGCATTATTGATCACATGTGCTGTTGTTAGCGAAGAAC ACTATCTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCTAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTA ACAGGTAGATAAGCAGTGTTGTCTAATTTTAC ACCACCTGATTTTTGACACAGGATGTAATTACTCTGTATATGGTGACACCATCATTATTCAATCATCATTCAGGCATATTCATGATGTTCAAAAA]


>consensus_14438#0 GAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAA GATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCAT GGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGC GGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCAT GCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATTTGGTGCAATGAGAGCTCGGGGT GCTAGGGTAACTGATATCTGTATCATTGTTGTCTCTGCGGATGATGGTGTTCGTCCACAA ACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTGATAGCCATAAAC AAGATAGACAAGGAAGGAGCTAATGCTGAACGGGTCATGCAAGAGCTTTCCCAAATTGGA CTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTCAGATAAGTGCTCTTAATGGA GAGGGTGTAGATGAACTATTGGAGACTATCATTCTTGTTGCTGAGCTGCAAGAATTAAAG GCCAATCCTCATAGAAATGCAAAGGGTACAGTTATTGAAGCATGCCTTGACAAAGCTAAA GGATCTCTTGCCACCCTAGTTGTACAGAATGGAACCCTAAACAAGGGTGATATTGTTGTG TGTGGTGAGGCTTTTGGAAAGATCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGAT AAGGCTGGGCCATCCAATGCCGTGCAGGTTATTGGCTTGAATAATGTACCCCTTGCTGGT GATGAATTTGAGTCTGTGGACAACCTTGATGTTGCACGTGAAAGGGCAAACGCACGTGCT GAAGCACTGAGAATTGAAAGGATATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCA TCCATTGCTGCATCTGTTTCATCTGGAAAACAAGTAGGAATTGATACACACGAGCTTAAT ATCATCCTTAAAGTTGATTTTCAGGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTG CTGCCTCAAGAAAATGTCTCCTTGAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTC AGTGATGTTGATCTGGCTGTTGCTTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCT CCAGGATCAGTTAAAAGCTATGCTAAGAAGAAAAGTGTGGAAATTCGTCTGTACAAGGTG ATCTATGATTTGATTGATGATTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAG GAGGAAGTACCAATTGGTTCAGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAG GTGGCGGGTTGCATGATTACTACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTT CGTAAAGGGAAAGAAGTTTATATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACT GTAAAGGAGGTTGGTGCTGGGCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGG GAGGAAGGTGATGTCGTGGAGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAA GCCTCTGCTTCTGTGACTGCTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAA AGCTGATAGGCATCCATCATACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGC AAGAAAGAAAGAAAGACGGGGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAA CAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCAC CAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTAC ATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGC AGTGTTGTCTAATTTTACACCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGG TGACACCATCATTATTCAATCATCATTCATGCATATTCATGATGTTCAAAAA



consensusID : consensus_14438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2040
fasta sequence
                              [TACTACTCCCCCCTCGGCTCGGCGTCGGCTCCCGTCTCGCCTCCTCGCGAGCTCGCCCGCCGCCTGCGCCAATCTCTCTCCACCCCGCGACCAGGGGGCGCCGCCGCGCCGTCGTTCGCCTCCCGCCGCCCCCGCATCGCCATCCCCGGTGAGCATCCACCCTGTATCCGTTGCCACGGGGGGCGTCCTCTCCTCTCTCGATGGGGTTCCCTGCTTCTGTTGCCAACCTGGGGACCAACGGGAGGCCCGCGGCGAGCTCATCGCATTTGGCTTCGAGGATCAGGTTTGCTGGTCTGGGCAGTATCCGGCGGTGGCAGTATGCGCCTGGGAGGCTGTGTAGATGCATGGTTGTGACCAATTTGATCGATGAAGAGAAGGGGGTTCAGTTCTCGTCGAGAGGGAGTGTGAGTGTGAAGCCTAGTGATGATAGCGATCTTCTTTTGAAGCCACCGCAGAAGCCAATCCGGGCGAATGGGCCACCGGAGAGCGTAAATGCGGCATCACCATCTCCGTCGAGGCCGACGTTGGAGGATAGGGATAAGGTTAGGGAGTCATTGGATGAGGTGTTGGAGAAGGCTGAGAAGCTCAAGGCATCAACCTCTGGAAATGGAATTGGAAATGGTGACTTGAGGCAGAATGGCGCGTCGAAGCCTGATAGTTCGGCAACGCCAGCAGCGGAGGGTGCGAATTCGAGGAAGACAAAAACACTTAAGAGCGTATGGCGAAAGGGAAACCCTGTGTCAACTGTACATAAGGTGGTCAGAGATCATCCACGCTCTGAAAGTAGGAATCAGTCTAGTTCTACAGCAAAACCTTCTATGCCAGCTCCAACAAAACCAGTACCTCCTCTACTAACAAAACCTTCAGTAGTAGCACCACCACCTCGTCGGCCTGTCAAGGCTGATACATCAAAGGAGAAAAAGGGACCCATCCTGATTGATAAATTTGCTTCCAATAAACCAATAGTGGATCCAGTTGTAGCTGCAGCACTGATAGAACCTGTAAAGCCAGTACGAGGCCCACCAGCAAAAGTCAAGGATGATCGTCGTAAAAAAACAAGCACACCAGCTGGTCCTCGCCGACGAATGCCAAAAAATGATGGTTTAGTTGATGAGGATACTGCAGTGCGCAAGGGGAGGAGATGGAGCAAGGCAAAACGCAGAGCTGCAAGACTTCAGCTTGAGGCTTCACAAGTTGAAGAGCCAGTTAGAGTCGAGATCCTTGAAGTTGGTGAAGAAGGAATGGTAATTGAGGAATTGGCATATCAATTGGCAATTGACGAATCAGAAATTCTGCGATTTTTATCTGTGAGAGGAGCTATGCTTGACAATGTTCAGACACTTGATAAAGATCTGGTTAAGATGGTTTGTATGGAATATGATGTAGAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATCCATCATACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGGGGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACACCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGGTGACACCATCATTATTCAATCA]

[+] EMBL AK068873             [TACTACTCCCCCCTCGGCTCGGCGTCGGCTCCCGTCTCGCCTCCTCGCGAGCTCGCCCGCCGCCTGCGCCAATCTCTCTCCACCCCGCGACCAGGGGGCGCCGCCGCGCCGTCGTTCGCCTCCCGCCGCCCCCGCATCGCCATCCCCGGTGAGCATCCACCCTGTATCCGTTGCCACGGGGGGCGTCCTCTCCTCTCTCGATGGGGTTCCCTGCTTCTGTTGCCAACCTGGGGACCAACGGGAGGCCCGCGGCGAGCTCATCGCATTTGGCTTCGAGGATCAGGTTTGCTGGTCTGGGCAGTATCCGGCGGTGGCAGTATGCGCCTGGGAGGCTGTGTAGATGCATGGTTGTGACCAATTTGATCGATGAAGAGAAGGGGGTTCAGTTCTCGTCGAGAGGGAGTGTGAGTGTGAAGCCTAGTGATGATAGCGATCTTCTTTTGAAGCCACCGCAGAAGCCAATCCGGGCGAATGGGCCACCGGAGAGCGTAAATGCGGCATCACCATCTCCGTCGAGGCCGACGTTGGAGGATAGGGATAAGGTTAGGGAGTCATTGGATGAGGTGTTGGAGAAGGCTGAGAAGCTCAAGGCATCAACCTCTGGAAATGGAATTGGAAATGGTGACTTGAGGCAGAATGGCGCGTCGAAGCCTGATAGTTCGGCAACGCCAGCAGCGGAGGGTGCGAATTCGAGGAAGACAAAAACACTTAAGAGCGTATGGCGAAAGGGAAACCCTGTGTCAACTGTACATAAGGTGGTCAGAGATCATCCACGCTCTGAAAGTAGGAATCAGTCTAGTTCTACAGCAAAACCTTCTATGCCAGCTCCAACAAAACCAGTACCTCCTCTACTAACAAAACCTTCAGTAGTAGCACCACCACCTCGTCGGCCTGTCAAGGCTGATACATCAAAGGAGAAAAAGGGACCCATCCTGATTGATAAATTTGCTTCCAATAAACCAATAGTGGATCCAGTTGTAGCTGCAGCACTGATAGAACCTGTAAAGCCAGTACGAGGCCCACCAGCAAAAGTCAAGGATGATCGTCGTAAAAAAACAAGCACACCAGCTGGTCCTCGCCGACGAATGCCAAAAAATGATGGTTTAGTTGATGAGGATACTGCAGTGCGCAAGGGGAGGAGATGGAGCAAGGCAAAACGCAGAGCTGCAAGACTTCAGCTTGAGGCTTCACAAGTTGAAGAGCCAGTTAGAGTCGAGATCCTTGAAGTTGGTGAAGAAGGAATGGTAATTGAGGAATTGGCATATCAATTGGCAATTGACGAATCAGAAATTCTGCGATTTTTATCTGTGAGAGGAGCTATGCTTGACAATGTTCAGACACTTGATAAAGATCTGGTTAAGATGGTTTGTATGGAATATGATGTAGAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATCCATCATACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGGGGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACACCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGGTGACACCATCATTATTCAATCA]
[+] EMBL CB642637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCACCCCTGAAGCCAATCCGGGCGAATGGGCCACCGGAGAGCGTAAATGCGGCATCACCATCTCCGTCGAGGCCGACGTTGGAGGATAGGGATAAGGTTAGGGAGTCATTGGATGAGGTGTTGGAGAAGGCTGAGAAGCTCAAGGCATCAACCTCTGGAAATGGAATTGGAAATGGTGACTTGAGGCAGAATGGCGCGTCGAAGCCTGATAGTTCGGCAACGCCAGCAGCGGAGGGTGCGAATTCGAGGAAGACAAAAACACTTAAGAGCGTATGGCGAAAGGGAAACCCTGTGTCAACTGTACATAAGGTGGTCAGAGATCATCCACGCTCTGAAAGTAGGAATCAGTCTAGTTCTACAGCAAAACCTTCTATGCCAGCTCCAACAAAACCAGTACCTCCTCTACTAACAAAACCTTCAGTAGTAGCACCACCACCTCGTCGGCCTGTCAAGGCTGATACATCAAAGGAGAAAAAGGGACCCATCCTGATTGATAAATTTGCTTCCAATAAACCAATAGTGGATCCAGTTGTAGCTGCAGCACTGATAGAACCTGTAAAGCCAGTACGAGGCCCACCAGCAAAAGTCAAGGATGATCGTCGTAAAAAAACAAGCACACCAGCTGGTCCTCGCCGACGAATGCCAAAAAATGATGGTTTAGTTGATGAGGATACTGCAGTGCGCAAGGGGAGGAGATGGAGCAAGGCAAAACGCAGAGCTGCAAGACTTCAGCTTGAGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI978532             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCCATCATACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGGGGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACACCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGG                      ]


>consensus_14438#1 TACTACTCCCCCCTCGGCTCGGCGTCGGCTCCCGTCTCGCCTCCTCGCGAGCTCGCCCGC CGCCTGCGCCAATCTCTCTCCACCCCGCGACCAGGGGGCGCCGCCGCGCCGTCGTTCGCC TCCCGCCGCCCCCGCATCGCCATCCCCGGTGAGCATCCACCCTGTATCCGTTGCCACGGG GGGCGTCCTCTCCTCTCTCGATGGGGTTCCCTGCTTCTGTTGCCAACCTGGGGACCAACG GGAGGCCCGCGGCGAGCTCATCGCATTTGGCTTCGAGGATCAGGTTTGCTGGTCTGGGCA GTATCCGGCGGTGGCAGTATGCGCCTGGGAGGCTGTGTAGATGCATGGTTGTGACCAATT TGATCGATGAAGAGAAGGGGGTTCAGTTCTCGTCGAGAGGGAGTGTGAGTGTGAAGCCTA GTGATGATAGCGATCTTCTTTTGAAGCCACCGCAGAAGCCAATCCGGGCGAATGGGCCAC CGGAGAGCGTAAATGCGGCATCACCATCTCCGTCGAGGCCGACGTTGGAGGATAGGGATA AGGTTAGGGAGTCATTGGATGAGGTGTTGGAGAAGGCTGAGAAGCTCAAGGCATCAACCT CTGGAAATGGAATTGGAAATGGTGACTTGAGGCAGAATGGCGCGTCGAAGCCTGATAGTT CGGCAACGCCAGCAGCGGAGGGTGCGAATTCGAGGAAGACAAAAACACTTAAGAGCGTAT GGCGAAAGGGAAACCCTGTGTCAACTGTACATAAGGTGGTCAGAGATCATCCACGCTCTG AAAGTAGGAATCAGTCTAGTTCTACAGCAAAACCTTCTATGCCAGCTCCAACAAAACCAG TACCTCCTCTACTAACAAAACCTTCAGTAGTAGCACCACCACCTCGTCGGCCTGTCAAGG CTGATACATCAAAGGAGAAAAAGGGACCCATCCTGATTGATAAATTTGCTTCCAATAAAC CAATAGTGGATCCAGTTGTAGCTGCAGCACTGATAGAACCTGTAAAGCCAGTACGAGGCC CACCAGCAAAAGTCAAGGATGATCGTCGTAAAAAAACAAGCACACCAGCTGGTCCTCGCC GACGAATGCCAAAAAATGATGGTTTAGTTGATGAGGATACTGCAGTGCGCAAGGGGAGGA GATGGAGCAAGGCAAAACGCAGAGCTGCAAGACTTCAGCTTGAGGCTTCACAAGTTGAAG AGCCAGTTAGAGTCGAGATCCTTGAAGTTGGTGAAGAAGGAATGGTAATTGAGGAATTGG CATATCAATTGGCAATTGACGAATCAGAAATTCTGCGATTTTTATCTGTGAGAGGAGCTA TGCTTGACAATGTTCAGACACTTGATAAAGATCTGGTTAAGATGGTTTGTATGGAATATG ATGTAGAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAAT TTCTTGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGG GCCATGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGG CATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTG ATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATCCATCATAC AACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGGGGT GCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCGTAA ATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGTCTC TTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAGCTG TTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACACCA CCTGATTTTTGACACAGGATGTAATTACTCTGTAATGGTGACACCATCATTATTCAATCA



consensusID : consensus_14438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence
                              [CTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTTTCCCTTTCCTTTATTTTCCCCGTTCCTTTTACCATGATCCTTTCTAACATTTCCTAATATACCATATTTCGGATGAAAAAGTTACTGAAATTACAGNTGGTTCTCCTCATGAGATGGCCCCTCTGGCCATGACGACTCTAAACAAAATACTCATNACAAGTCTGATGCAATTTTGACATAAAGAGAAAGCATTTGAAACTATAAATGTTTATGTGCATTANAACTGTTAGTTACATGACATTGATGAATATGGATAAATAGAGGTCGNTGTTGACTANCTAGCAAATATAAACCTGCCCAAGTCCTAAATGGCATNCTTATATGNGAGCTNTTTTACACGATGTAAAAATGCACCCTTTTATCAG]

[+] EMBL CA305656             [CTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCCGTGCAATGTATGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTTTCCCTTTCCTTTATTTTCCCCGTTCCTTTTACCATGATCCTTTCTAACATTTCCTAATATACCATATTTCGGATGAAAAAGTTACTGAAATTACAGNTGGTTCTCCTCATGAGATGGCCCCTCTGGCCATGACGACTCTAAACAAAATACTCATNACAAGTCTGATGCAATTTTGACATAAAGAGAAAGCATTTGAAACTATAAATGTTTATGTGCATTANAACTGTTAGTTACATGACATTGATGAATATGGATAAATAGAGGTCGNTGTTGACTANCTAGCAAATATAAACCTGCCCAAGTCCTAAATGGCATNCTTATATGNGAGCTNTTTTACACGATGTAAAAATGCACCCTTTTATCAG]


>consensus_14438#2 CTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCCGTGCAATGTA TGATGATGGTGGAAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTTTCCC TTTCCTTTATTTTCCCCGTTCCTTTTACCATGATCCTTTCTAACATTTCCTAATATACCA TATTTCGGATGAAAAAGTTACTGAAATTACAGNTGGTTCTCCTCATGAGATGGCCCCTCT GGCCATGACGACTCTAAACAAAATACTCATNACAAGTCTGATGCAATTTTGACATAAAGA GAAAGCATTTGAAACTATAAATGTTTATGTGCATTANAACTGTTAGTTACATGACATTGA TGAATATGGATAAATAGAGGTCGNTGTTGACTANCTAGCAAATATAAACCTGCCCAAGTC CTAAATGGCATNCTTATATGNGAGCTNTTTTACACGATGTAAAAATGCACCCTTTTATCA G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14438#0      GAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTCTTGACGAGGAA 60
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      ----------------------------TACTACTCCCCCCTCGGCTCGGCGTCGGCTCC 32
                                                                                   

consensus_14438#0      GATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACTATCATGGGCCATGTCG--ATC 118
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CGTCTCGCCTCCTCGCGAGCTCGCCCGCCGCCTGCGCCAATCTCTCTCCACCCCGCGACC 92
                                                                                   

consensus_14438#0      ATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGGTGGCATCTGAGGCTG 178
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      AGGGGGCGCCGCCGCGCCGTCGTTCGCCTCCCGCCGCCCCCGCATCGCCATCCCCGGTGA 152
                                                                                   

consensus_14438#0      GCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGGTTGATGGAAACCCTC 238
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      GCATCCACCCTGTATCCGTTGCCACGGGGGGCGTCCTCTCCTCTCTCGATGGGGTTCCCT 212
                                                                                   

consensus_14438#0      ATGCTTGTGTTTTTCTTGATACTCCA----GGGCACGAGGCATTTGGTGCAATGAGAGCT 294
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      GCTTCTGTTGCCAACCTGGGGACCAACGGGAGGCCCGCGGCGAGCTCATCGCATTTGGCT 272
                                                                                   

consensus_14438#0      CGGGGTGCTAGGGTAACTGATATCTGTATCATT----GTTGTC--TCTGCGGATGATGGT 348
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TCGAGGATCAGGTTTGCTGGTCTGGGCAGTATCCGGCGGTGGCAGTATGCGCCTGGGAGG 332
                                                                                   

consensus_14438#0      GTTCGTCCACAAACAAATGAGGCAATTGCACATGCAAAGGCAGCTGGAGTCCCTATTGTG 408
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CTGTGTAGATGCATGGTTGTGACCAATTTGATCGATGAAGAGAAGGGGGTTCAGTTCTCG 392
                                                                                   

consensus_14438#0      ATAGCCATAAACAAGATAGACAAGGAAGGAGCTAATGCTGAAC--------GGGTCATGC 460
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TCGAGAGGGAGTGTGAGTGTGAAGCCTAGTGATGATAGCGATCTTCTTTTGAAGCCACCG 452
                                                                                   

consensus_14438#0      AAGAGCTTTCCCAAATTGGACTTATGCCAGAGGCGTGGGGTGGTGATATCCCAATGATTC 520
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CAGAAGCCAATCCGGGCGAATGGGCCACCGGAGAGCGTAAATGCGGCATCACCATCTCCG 512
                                                                                   

consensus_14438#0      AGATAAGTGCTCTTAATGGAGAGGGTGTAGAT----GAACTATTGGAGACTATCATTCTT 576
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TCGAGGCCGACGTTGGAGGATAGGGATAAGGTTAGGGAGTCATTGGATGAGGTGTTGGAG 572
                                                                                   

consensus_14438#0      GTTGCTGAGCTGCAAGAATTAAAGGCCAATCCTCATAGAAATGCAAAGGGTACAGTTATT 636
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      AAGGCTGAGAAGCTCAAGGCATCAACCTCTGGAAATGGAATTGGAAATGGTG-ACTTGAG 631
                                                                                   

consensus_14438#0      GAAGCATGCCTTGACAAAGCTAAAGGATCTCTTGCCACCCTAGTTGTACAGAATGGAACC 696
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      GCAGAATGGCGCGTCGAAGCCTGATAGTTCG--GCAACGCCAGCAGCGGAGGGTGCGAAT 689
                                                                                   

consensus_14438#0      CTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCC-GTGCAATGTA 755
consensus_14438#2      CTAAACAAGGGTGATATTGTTGTGTGTGGTGAGGCTTTTGGAAAGATCCCGTGCAATGTA 60
consensus_14438#1      TCGAGGAAGACAAAAACACTTAAGAGCG-TATGGCGAAAGGGAA-ACCCTGTGTCAACTG 747
                          *  ***    * *   **  * * * *  ***    ** ** * ** ***  *  * 

consensus_14438#0      TGATGATGGTGG--AAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTATT 813
consensus_14438#2      TGATGATGGTGG--AAAGCTTATCGATAAGGCTGGGCCATCCAATGCCGTGCAGGTTTTC 118
consensus_14438#1      TACATAAGGTGGTCAGAGATCATCCAC--GCTCTGAAAGTAGGAATCAGTCTAGTTCTAC 805
                       *    * *****  * ** * *** *   *    *    *   *  * **  ** *    

consensus_14438#0      GGCTTGAATAATGTACCCCTTGCTG------GTGATGAATTTGAGTCTGTGGACAACCTT 867
consensus_14438#2      CCTTTCCTTTATTTTCCCCGTTCCTTTTACCATGATCCTTTCTAACATTTCCTAATATAC 178
consensus_14438#1      AGCAAAACCTTCTATGCCAGCTCCAACAAAACCAGTACCTCCTCTACTAACAAAACCTTC 865
                                       **    *            *   *       *      *     

consensus_14438#0      GAT-GTTGCAC-GTGAAAGGGCAA--ACGCACGTGCTGAAGCACTGAGAATTGAAAGGAT 923
consensus_14438#2      CAT-ATTTCGG-ATGAAAAAGTTA--CTGAAATTACAGNTGGTTCTCCTCATGAGATGGC 234
consensus_14438#1      AGTAGTAGCACCACCACCTCGTCGGCCTGTCAAGGCTGATACATCAAAGGAGAAAAAGGG 925
                         *  *  *      *    *       *      * *               * * *  

consensus_14438#0      ATCTTCGAAAGCTGGGGAAGGGAAAGTCACTCTGTCATCCATTGCTGCATCTGTTTCATC 983
consensus_14438#2      CCCTCTGGCCA-TGACGACTCTAAACAAAAT-----ACTCATNAC-AAGTCTGATGCAAT 287
consensus_14438#1      ACCCATCCTGATTGATAAATTTGCTTCCAATAA---ACCAATAGTGGATCCAGTTGTAGC 982
                         *         **   *          * *     *   **        * * *  *  

consensus_14438#0      TGGAAAACAAGTAGGAATTGATACACACGAGCTTAATATCATCCTTAAAGTTGATTTTCA 1043
consensus_14438#2      TTTGACATAAAGAGAAA-----GCATTTGAA---ACTATAAATGTTTATGTGCATTANAA 339
consensus_14438#1      TGCAGCACTGATAGAA-------CCTGTAAAGCCAGTACGAGGCCCACCAGCAAAAGTCA 1035
                       *     *     ** *       *     *    * **  *            *     *

consensus_14438#0      GGGTTCAGTTGAGGCCATTAGGCAAGCAATCCAAGTGCTGCCTCAAGAAAATGTCTCCTT 1103
consensus_14438#2      CTGTTAGTTACATGACATTGATGAATATGGATAAATAGAGGTC---GNTGTTGACTANCT 396
consensus_14438#1      AGGATGATC----GTCGTAAAAAAACAAGCACACCAGCTGGTCCTCGCCGACGAATGCCA 1091
                         * *        * * *     **       *      *      *     *  *    

consensus_14438#0      GAGGTTCCTACTTCAAGCTCCGGGAGATGTGAGTGTCAGTGATGTTGATCTGGCTGTTGC 1163
consensus_14438#2      AG----CAAATATAAACCTGCCCAAGTCCTAAATGGCA----TNCTTATATGNGAGCTNT 448
consensus_14438#1      AAAAATGATGGTTTAGTTGATGAGGATACTGCAGTGCGCAAGGGGAGGAGATGGAGCAAG 1151
                                   * *              *      *                  *    

consensus_14438#0      TTCAGAAGGGATTATATTTGGTTTTAATGTCAAAGCTCCAGGATCAGTTAAAAGCTATGC 1223
consensus_14438#2      TTTACACGATGTAAAAATGCACCCTTTTATCAG--------------------------- 481
consensus_14438#1      GCAAAACGCAGAGCTGCAAGACTTCAGCTTGAGGCTTC----ACAAGTTGAAGAGCCAGT 1207
                          * * *                     * *                            

consensus_14438#0      TAAGAAGAAAAGTGTGGAAATTCGTCTGTACAA---GGTGATCTATGATTTGATTGATGA 1280
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TAGAGTCGAGATCCTTGAAGTTGGTGAAGAAGGAATGGTAATTGAGGAATTGGCATATCA 1267
                                                                                   

consensus_14438#0      TTTGCGGAATGCCATGGAAGGACTTCTTGAACTTGCTGAGGAGGAAGTACCAATTGGTTC 1340
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      ATTGGCAATTGACGAATCAGAAATTCTGCGATTTTTATCTGTGAGAGGAGCTATGCTT-- 1325
                                                                                   

consensus_14438#0      AGCCAAAGTTCGTGCTGTTTTTAGTAGTGGCAGTGGCAAGGTGGCGGGTTGCATGATTAC 1400
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      -GACAATGTTCAGACACTTGATAAAGATCTGGTTAAGATGGTT-TGTATGGAATATGATG 1383
                                                                                   

consensus_14438#0      TACTGGGAAAGTTGTTCATGACTGCAATGTTCGGGTTCTTCGTAAAGGGAAAGAAGTTTA 1460
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TAGAAGTACTGGAAAGTGGTCCAGTGAAAGTGGAAGAGATGGCAAAGAAGAAGGAATTTC 1443
                                                                                   

consensus_14438#0      TATGGGTACACTTGATTCGTTAAGACGGGTGAAAGAAACTGTAAAGGAGGTTGGTGCTGG 1520
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      T-TGACGAGGAAGATTTGGACAAGTTGGAAGACAGACCCCCTATTGTAACT--ATCATGG 1500
                                                                                   

consensus_14438#0      GCTAGAGTGTGGCATTGGGGTAGATGATTTTGACGAATGGGAGGAAGGTGA-TGTCGTGG 1579
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      GCCA---TGTCGATCATGGAAAGACTACCCTGTTGGATTATATACGCAAGAGCAAGGTGG 1557
                                                                                   

consensus_14438#0      AGGCATTCAACACAGTTAAGAAGACAAGAACCCTAGAGGAAGCCTCTGCTTCTGTGACTG 1639
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TGGCATCTGAGGCTGGCGGAATAACACAAGGGATTGGTGCCTATCAGGTTATTGTACAGG 1617
                                                                                   

consensus_14438#0      CTGCTCTAAAGGATGCCGGCGTCCAGCTGTAGAAGTGGCAAAGCTGATAGGCATCCATCA 1699
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TTGATGGAAACCCTCATGCTTGTGTTTTTCTTGATACTCCAGGGCACGAGGCATCCATCA 1677
                                                                                   

consensus_14438#0      TACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGG 1759
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TACAACAACTGCAGGGGAATCGGAGCCAAATTTATCATGGCAAGAAAGAAAGAAAGACGG 1737
                                                                                   

consensus_14438#0      GGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCG 1819
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      GGTGCATTATTGATCACATTGCTGTTGTTAGCGAAGAACAACAAACTGGTTACTCGATCG 1797
                                                                                   

consensus_14438#0      TAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGT 1879
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      TAAATACGACGAACTTATGCAAGCCATAGTACAGTAGTCACCAAACCTGAGCTTAGCCGT 1857
                                                                                   

consensus_14438#0      CTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAG 1939
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CTCTTATAGCCTGCATCAGCTGATGCTGTATTTTGATGTACATAACAAGAGAGGAGACAG 1917
                                                                                   

consensus_14438#0      CTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACA 1999
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CTGTTACCTTTTTTTAGTTTGCCACTAACAGGTAGATAAGCAGTGTTGTCTAATTTTACA 1977
                                                                                   

consensus_14438#0      CCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGGTGACACCATCATTATTCAA 2059
consensus_14438#2      ------------------------------------------------------------
consensus_14438#1      CCACCTGATTTTTGACACAGGATGTAATTACTCTGTAATGGTGACACCATCATTATTCAA 2037
                                                                                   

consensus_14438#0      TCATCATTCATGCATATTCATGATGTTCAAAAA 2092
consensus_14438#2      ---------------------------------
consensus_14438#1      TCA------------------------------ 2040
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)