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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14449#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1406 fasta sequence
[ATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGA------GCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGGAGATGCTGCTCATCAGAAAACAGTAATCGCCTTCTTTTATCGTAATAAAAATTTGGTCATATTGTCTTCGGAACAACAGTAAGTGCAGCATCTGGAAGTATTGGTGAAACAAAGTTCTTCGTAGGCATAGACTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGCAGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTACCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTTCGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAATGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAG]
[+] EMBL AK071765 [ATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGA GCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGGAGATGCTGCTCATCAGAAAACAGTAATCGCCTTCTTTTATCGTAATAAAAATTTGGTCATATTGTCTTCGGAACAACAGTAAGTGCAGCATCTGGAAGTATTGGTGAAACAAAGTTCTTCGTAGGCATAGACTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGCAGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTACCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTTCGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAATGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAG]
[+] EMBL CB659861 [ CCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGAGCAGGTGCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCT ]
consensusID : consensus_14449#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1124 fasta sequence
[GGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGAAGATGCTGCTCATCAGAAAACAGCATAGACTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGCAGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTACCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTTCGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAATGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAGATGTTATTATAGTTCGTCGTCGAAATGTGATCATTATTCATATCCCTTAAAAGG]
[+] EMBL CB646104 [GGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGCTATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGAAGATGCTGCTCATCAGAAAACAGCATAGACTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGAT ]
[-] EMBL CB646105 [ GTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGAAGATGCTGCTCATCAGAAAACAGCATAGACTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGCAGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTACCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTTCGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAATGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAGATGTTATTATAGTTCGTCGTCGAAATGTGATCATTATTCATATCCCTTAAAAGG]
[-] EMBL CB659860 [ GCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGACTACGGCTACCAGTTATATCTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCGCCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCTTCGTGATCCATATACTTCGTTGAAGATGCTGCTCATCAGAAAACAGCATCGCCTCCAGAAAATGAATCTGCAATCCGAGGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGCAGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTACCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTTCGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTTGCAGGTGTTCGTCAAATTAATGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTana ]
consensusID : consensus_14449#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 930 fasta sequence
[CTCCATCTCGGGATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGAGCAGGTGCAGGTNGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCA-CCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGGTGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTC-CAAGCTATGGC-AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT-AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA-GGTTCTCATAACTTATCTACCTT-ATTATGCTTTGTGTTTGAAGTTATATTACT-CGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAACTGTCTTTCTGTGTGTC-ATAAGGCATCGGCCT]
[+] EMBL CA762148 [CTCCATCTCGGGATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGAGCAGGTGCAGGTNGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGT ]
[+] EMBL AK063879 [ TCTCGGGATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCGGAGCGGGTGCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACGGCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCAAGAAAGCCA CCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGT ]
[-] EMBL CB967086 [ TTCGGAGTGTATGGTTCGCAAGAAA CCACCCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCCATTCGTGATATAGATGGCAAGAATGGGTGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCAGAAGTCCCAGGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCGCCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAAGATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACTNCGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAACTGTCTTTCTGTGTGTC ATAAGGCATCGGCCT]
[-] EMBL BU673253 [ TTCGGAGTGTAT GGCCGCAAGAAAGCCA CCAGGTTTGCCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCCATTCGTGATATAGATGGCAAGAATGGGTGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGNCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCAGAAGTCCCAGGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCGCCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAAGATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAACTGTCTTTCTGTGTGTC ATAAGGC TCGGCC ]
[-] EMBL BI305410 [ CATTGATTTTGATGACAGNAGGGATGCTCAGGATGCAATTCGTGATATAGATGGCAAGAATGGGTGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGTGGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAGACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCAGAAGTCCCAGGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCGCCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTTAAGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAAGATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAACTGTCTTTCTGTGTGTCAATAAGGCATCGGCCT]
[+] EMBL BI795718 [ GAATGTGGTGAGACT GGCACTTTGCTCGTGAATCCCGTTTGAGGATT GTTCCGGGGTTCTA GCAGTGGAAGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCTCAAGCTATGGCAAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCC AATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAaaaaaaaa ]
[-] EMBL CK085312 [ GGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTTTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAA ]
[-] EMBL CK085251 [ GGTACCGCAGGAGTC CAAGCTATGGC AGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAGTTCAAC ]
[+] EMBL AU102025 [ CAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCTGCCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTTATATTACT CGAGAAACTTATGATTGGATGTGTATTCAACTAAaaaaaaa ]
[+] EMBL AU033221 [ AGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCGGCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGNCTTGATGAATCTCCTGCCTATGATAACGGATATCGCCGAAGNAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGNCNTACTNCAAATATCATCATCAACTCTGGACTTTGATTAAGGGTTCTCATAACTTATCTACCTTGATTATGCTTTGTGTTTGAAGNTATATTACT CGAGAAACTTATGATTGGATGTGTATTC ]
[+] EMBL CA765321 [ ATCTCCTGNCTATGATAACGGATATCGCCGCAGCAGAAGTT AGAGCTGAACCTGATGTCTAAAGACTGCTGTTACGAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATCATCATCAACTCTGGACTTTGATTAA GGTTCTCATAACTTATCTACCTT ATTATGCTTTGTGTTTGAAGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14449#0 ------------------ATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCG 42
consensus_14449#1 ------------------------------------------------------------
consensus_14449#2 CTCCATCTCGGGATCTCGCCCACCCACCACTCCACCCCCTCTCCTCTCCGTGCGCCGCCG 60
consensus_14449#0 CCGCCGCAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCG 102
consensus_14449#1 ------------------------------------------------------------
consensus_14449#2 CAGAATTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGTGAGGTCCATCGAGATCGCGACCG 120
consensus_14449#0 CGACCGGAGCAGGTTGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACG 162
consensus_14449#1 ------------------------------------------------------------
consensus_14449#2 GAGCAGGTGCAGGTNGCGATGGCCCGCGTGTACGTCGGAAACCTGGATCCCCGCGTGACG 180
consensus_14449#0 GCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCA 222
consensus_14449#1 ------------------------------------------------------------
consensus_14449#2 GCGCGGGAGCTCGAGGACGAGTTCCGCGTCTTTGGAGTTCTTCGGAGTGTATGGGTCGCA 240
consensus_14449#0 AGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCA 282
consensus_14449#1 ------------GGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCA 48
consensus_14449#2 AGAAAGCCACCAGGTTTTGCATTCATTGATTTTGATGACAGGAGGGATGCTCAGGATGCA 300
************************************************
consensus_14449#0 ATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGT 342
consensus_14449#1 ATTCGTGATATAGATGGCAAGAATGGATGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGT 108
consensus_14449#2 ATTCGTGATATAGATGGCAAGAATGGGTGGAGAGTTGAGCTGTCTCGTAATGCAAGCAGT 360
************************** *********************************
consensus_14449#0 GGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAG 402
consensus_14449#1 GGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAG 168
consensus_14449#2 GGTCGTGGTGGCCGTGATCGATATGGTAGCTCTGAGAGCAAGTGTTATGAATGTGGTGAG 420
************************************************************
consensus_14449#0 ACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGA 462
consensus_14449#1 ACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGA 228
consensus_14449#2 ACTGGGCACTTTGCTCGTGAATGCCGTTTGAGGATTGGTTCCGGGGGTCTAGGCAGTGGA 480
************************************************************
consensus_14449#0 AGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGC 522
consensus_14449#1 AGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGC 288
consensus_14449#2 AGGCGTCGTAGCAGGAGCCGCAGCCGCAGCCGAAGTCCCAGGTACCGCAGGAGTCCAAGC 540
************************************************************
consensus_14449#0 TATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCG 582
consensus_14449#1 TATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCG 348
consensus_14449#2 TATGGCAGAAGAAGTTACAGCCCTGCAGGGCGCTCTCCAAGGCGTCGTAGTGTGTCACCG 600
************************************************************
consensus_14449#0 GCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCT 642
consensus_14449#1 GCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCT 408
consensus_14449#2 GCTCGTGCACGCAGCTATAGCAGGTCACCACAATACAACCGTGGCCGTGATGAATCTCCT 660
************************************************************
consensus_14449#0 GCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACT 702
consensus_14449#1 GCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACT 468
consensus_14449#2 GCCTATGATAACGGATATCGCCGCAGCAGAAGTTAGAGCTGAACCTGATGTCTAAAGACT 720
************************************************************
consensus_14449#0 GCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATC 762
consensus_14449#1 GCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATC 528
consensus_14449#2 GCTGTTACAAATGTTACTTTGTGGGTTGTCAGCTATGAACAATGCCCTACTCCAAATATC 780
************************************************************
consensus_14449#0 ATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGA 822
consensus_14449#1 ATCATCAACTCTGGACTTTGATTAAGGCATCGGCCTGCACTGCTTAAACGACTCGGCCGA 588
consensus_14449#2 ATCATCAACTCTGGACTTTGATTAAGGT------TCTCATAACTTATCTACCTTATTATG 834
*************************** ** **** **
consensus_14449#0 CTACG-GCTACCAGTTATAT--CTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCG 879
consensus_14449#1 CTACG-GCTACCAGTTATAT--CTTCGTGGTTGTGTTCTTCGCTCTTCATTCTACGCGCG 645
consensus_14449#2 CTTTGTGTTTGAAGTTATATTACTCGAGAAACTTATGATTGGATGTGTATTCAAC---TA 891
** * * * ******** ** * * ** * * * **** **
consensus_14449#0 CCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCT 939
consensus_14449#1 CCCTCGCCTGCTTCATGCAAACGTCATACAGCCCCATTAGTTGCTGCCTACAACACCTCT 705
consensus_14449#2 AGTTCAACTGTCTT-TCTGTGTGTCATAAGGCATCGGCCT-------------------- 930
** *** * * ****** ** *
consensus_14449#0 TCGTGATCCATATACTTCGTTGGAGATGCTGCTCATCAGAAAACAGTAATCGCCTTCTTT 999
consensus_14449#1 TCGTGATCCATATACTTCGTTGAAGATGCTGCTCATCAGAAAACAG-------------- 751
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 TATCGTAATAAAAATTTGGTCATATTGTCTTCGGAACAACAGTAAGTGCAGCATCTGGAA 1059
consensus_14449#1 ------------------------------------------------------------
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 GTATTGGTGAAACAAAGTTCTTCGTAGGCATAGACTCCAGAAAATGAATCTGCAATCCGA 1119
consensus_14449#1 ----------------------------CATAGACTCCAGAAAATGAATCTGCAATCCGA 783
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 GGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGC 1179
consensus_14449#1 GGAGCTGCAGTATTCAGTTGGATGATTTACACCCCTGCCCAGTCCGTCACGCCTTGTGGC 843
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 AGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTA 1239
consensus_14449#1 AGCCAGAGGTTTTGCTCTCCATGATCTTCCTTCTGCACTCGCTCAGCCTGCCTCAGCCTA 903
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 CCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTT 1299
consensus_14449#1 CCCTGCGTGCTGCCGTCTAGCCAAGAGCCTTCGCCACCACTGCTTCCCCGACGTCGCCTT 963
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 CGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAA 1359
consensus_14449#1 CGTTTCCATTGCTTCCCCGACGTTTGATTTCATTTGCTTAGCATTTGTTCGTCAAATTAA 1023
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 TGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAG------------- 1406
consensus_14449#1 TGTGGTGAATGGTTATTTCTTAGGGATCTACGGGTGAAAAATGCCAGATGTTATTATAGT 1083
consensus_14449#2 ------------------------------------------------------------
consensus_14449#0 -----------------------------------------
consensus_14449#1 TCGTCGTCGAAATGTGATCATTATTCATATCCCTTAAAAGG 1124
consensus_14449#2 -----------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||