cluster # 14451

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Oryza sativa
cluster # 14451 cluster # 14451 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14451#0 length = 2155 sequences # 14

consensus_14451#1 length = 451 sequences # 2

consensusID : consensus_14451#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 2155
fasta sequence

                              [GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCCCACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCG-TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA-TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG-GGAG-GTGGAGGACAGGTGG-GACAA------CAGCAGCAGCAGCA------GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC-AAGG-GCAG-GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT-CACAGATGATGGCGCAGCCAA--GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC-TGTCTCCACAG---GTTGTGGGTCAAGGCTTGA-CAAGAA-CAGCATCGA-TTGCTGCATTAAAT-CCACAGC-TACCTGGATCGTC-GACAAAT-GGGCCGA-TGGCAC-AAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAATGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGCTATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCCAACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAACTTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACCTGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAAGTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTTCACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG-GGGC-CTCTGTCAAAA-GTGCCCCG-TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT-----GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC-TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG--AAAAAAATGTCATTATATCGTGTCAAAAAAAAAAAAA]

[+] EMBL AK101755             [GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCCCACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCG TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGCCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA      CAGCAGCAGCAGCAGCAGCTGCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA  GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACTGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG   GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATTAAAT CCACAGC TACCTGGATCGTC GACAAAT GGGCCGA TGGCAC AAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAATGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGCTATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCCAACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAACTTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACCTGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAAGTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTTCACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG  AAAAAAATGTCATTATATCGTGTCAttg         ]
[+] EMBL CB638286             [                                                                                CGCCCCCA CCCGCCATGGCGGATCCGCCG TCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAATTTTTATCGTCGCCCACCGTCTTCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGTCGCAGATGCAGGCTCCTTCGCCCGGCCAGGCGGCGGCCGGGGCTGGAGGCTGCGGCCAGATCCACCGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB629367             [                                                                                                 GGCGGATCCGCCGCTCCGCGGCCGCCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACCCCAACCCTAACCCCCTCCTCTCCCCCCAAA TCCCACCGTCGCCCACCGTCTCCGACCTGTCCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACCCCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA      CAGCAGCAGCAGCA      GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA  GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG   GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATT AAT CC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM422281             [                                                                                                                                                                                                                                                                                                                                 GCAGGCT CTTCGCCCGGTCAGGCGGCGG CGGGGCTGGAGGCTTCGGCCAGATCCACCG TCGGGCTCGGGCTCCCG CTCGCCG TGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA      CAGCAGCAGCAGCA      GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA  GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAG   GTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TTGCTGCATTAAAT CCACAGC TACCTGGATCGTC GACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BI807450             [                                                                                                                                                                                                                                                                                                                                  CAGGCTCCTTCGCCCGGTCAGGCGGCGG CGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGG CAGCTTCCACAGTACGCTGCTGCTGCGG CAGGATGTACGGCAGTCAGGTGAACTTCTCGTGGAGTGTGGAGGACAGGTGGTGACAA      CAGCAGCAGCAGCA      GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGCAAAGGTGCAGTGTGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGTCCACAGATGATGGCGCAGCCAAAGGGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCG CAATGCAGCTCAAGCATTACCAGGTATGCAGTCCATGGGAGTCATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BI810269             [                                                                                                                                                                                                                                                                                                                                     GCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAA      CAGCAGCAGCAGCA      GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCA  GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA  GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACACGTGTCTCCACAG   GTTGTGGGTCAAGGTTGGACCAAGAACCAG ATCGATTTGCTGCATTAAATCCCACAGCTTACCTGGATCGTCGGACAAATGGGGCCGATTGGGACAAAATGTTCCTTTCTCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB637638             [                                                                                                                                                                                                                                                                                                                                                          GCGGCCGGGGCTGGAGGCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTCCACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCG GGAG GTGGAGGACAGGTGG GACAACAGCAGCAGCAGCAGCAGCA      GCTGGCTGCTCGCGCGGCCATGCTTAGTCAAGGCCAGATTGGGATGCTGC AAGG GCAG GGGAACGCAGCATCTGCGGCGCACTATGGTCTCCAGT CACAGATGATGGCGCAGCCAA  GGCAGAAGGGTATGGTGCAAGGTGCACAATTTAATACTGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTATGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAATTGAGGCCGCAGCAGACATCACAGCAAGGCACAC TGTCTCCACAGAAAGTTGTGGGTCAAGGCTTGA CAAGAA CAGCATCGA TT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB629368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGAGATTGCTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAATCATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGA AAAAAAATGTCATTATATCGTGT              ]
[-] EMBL CA763639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGCACCTAGAAAAAAATTGGCACTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGAGCAAGGGAAAAGGGAAATTACAT     GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTCCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAAAAAAAAATGTCATTATATCGTGTCAAAAAAAAAA   ]
[-] EMBL CA763640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCACCTAGAAAAAAATTGGCGCTTATCTGTTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTGCTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGA AAAAAAATGTCATTATATCGTAAAAAAAAAAAAAAAA]
[-] EMBL CB638287             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCAAAGACATCCTGTAAAGGTATCAGTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGCCCACAATG GGGC CTCTGTCAAAA GTGCCCCG TTTTTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT     GTTTTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTA                                                ]
[-] EMBL CB637639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGGACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAATTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTATTGAGCTTTCACCAATGCCCACAATG GGGC TTTTGTCAAAA GTGCCCCG TTTTTAAGCATCATGCCTCTTCATCAGTGCAAGGGAAAAGGGAAATTACAT     GTTTTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCCCAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTTTTTAAAGGAAAGAAGTTGTTGACTGACAGATTGTTCGCGACAGCTTCATCCAGGAGTTTTTGTGTACCCTTATTAAAAGTATTCGTTGATCGCTGTAGTTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTAAATAGATGTAGAACCCATATTATGGTATGGTGTATTTGCTACAACTCATAAGTTGATTTAAAAGATCAG  AAAAAAATGTCATTA                      ]
[+] EMBL CB684592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGACCCTTCACCAATGCCCACAATGTGGGCTCTCTGTCAAAATGTGCCCCGCTTTCTAAACATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACAT     GTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCT                                                 ]
[-] EMBL D43603               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCNTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCNCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCC TTTTCGTTCTTGTTGNTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAG  NAAAAAATGTNATTA                      ]




>consensus_14451#0
GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCC
CACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCGTCCGCGGCCG
CCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACC
CCAACCCTAACCCCCTCCTCTCCCCCCAAATCCCACCGTCGCCCACCGTCTCCGACCTGT
CCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACC
CCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAG
GCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTC
CACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCGGGAGGTG
GAGGACAGGTGGGACAACAGCAGCAGCAGCAGCTGGCTGCTCGCGCGGCCATGCTTAGTC
AAGGCCAGATTGGGATGCTGCAAGGGCAGGGGAACGCAGCATCTGCGGCGCACTATGGTC
TCCAGTCACAGATGATGGCGCAGCCAAGGCAGAAGGGTATGGTGCAAGGTGCACAATTTA
ATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTA
TGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAAT
TGAGGCCGCAGCAGACATCACAGCAAGGCACACTGTCTCCACAGGTTGTGGGTCAAGGCT
TGACAAGAACAGCATCGATTGCTGCATTAAATCCACAGCTACCTGGATCGTCGACAAATG
GGCCGATGGCACAAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAA
TGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGC
TATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCC
AACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAAC
TTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACC
TGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAA
GTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTT
CACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTG
CTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAAT
CATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTG
TTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGG
ACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAA
TTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGC
CCACAATGGGGCCTCTGTCAAAAGTGCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTG
CAAGGGAAAAGGGAAATTACATGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAG
TATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGC
AAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCG
ACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGC
TGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTG
TTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAA
GTTGATCTAAAAGATCAGAAAAAAATGTCATTATATCGTGTCAAAAAAAAAAAAA

consensusID : consensus_14451#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 451
fasta sequence

                              [GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BE040123             [GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB624828             [                                     AGGGAAAAGGGAAATTACATTACAGGTTATAGGGCATTTCACATTCAGAGTGGTATTAATTAGTATATAACCTGAGGATTGCTAGCAAATGGAAGCCCAATAAATGTATGAGCATGTACGGGCAAAAGTGGGATGATTGTGTTCTTTAAAGGAAAGAAGTGGCTGAGTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATCAGAAGTATTGGTTGATCGCTGTAGCTGACCCCTATCGTTGTACATAAAGGTTTTTTTGGGATCGGGG                                                                                                                                 ]




>consensus_14451#1
GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTGCAAGGGAAAAGGGAAATTACATTAC
AGGTTCTAGGACATTTCACATACAGCTTGGTATTAATTAGTATCTAACTTGAGGATTGCT
AGCAAATGGAAGCACAATAAATGTATGAGCATCTACGGGCAAAAGTGGGATGCTTGTGTT
CTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGTTCGCGACAGCCTCATCCAGGAGCTC
TTGTGTAACCTTATTAGAAGTATTCGTTGATCGCTGTAGCTGACCCCTCTCGTTGTACAT
AAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGTTCTTGTTGTTCCTATATAGATGTAG
AACCCATATTATGGTATCGTGTATTTGCTACAACTCATAAGTTGATCTAAAAGATCAGAA
NANAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14451#0      GTACCTGCCCCCGCACCCCCCGACGCAATCGTCCACCCCGCGTCGTCTCCGGCCGCCGCC 60
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CACCGCCGCCGGAGCCCCGCCGCCCCCAGCCCGCCATGGCGGATCCGCCGTCCGCGGCCG 120
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CCACCGCCTCGCCGCAGCCCGATCAGCTCGCCGCCGCCGCCGTCTCCACCCCGCAAAACC 180
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CCAACCCTAACCCCCTCCTCTCCCCCCAAATCCCACCGTCGCCCACCGTCTCCGACCTGT 240
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CCGCCATCTCGTCCCCGCAGCTCGACCCGTCCGCGGCGGGCGGCGGGGCCATGGACTACC 300
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CCCCGCGGCCGCCGCAGATGCAGGCTCCTTCGCCCGGTCAGGCGGCGGCCGGGGCTGGAG 360
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      GCTTCGGCCAGATCCACCGCTCGGGCTCGGGCTCCCGCCTCGCCGCTGTCGGCCAGCTTC 420
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CACAGTACGCTGCTGCTGCGGCCAGGATGTACGGCAGTCAGGTGAACTTCTCGGGAGGTG 480
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      GAGGACAGGTGGGACAACAGCAGCAGCAGCAGCTGGCTGCTCGCGCGGCCATGCTTAGTC 540
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      AAGGCCAGATTGGGATGCTGCAAGGGCAGGGGAACGCAGCATCTGCGGCGCACTATGGTC 600
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TCCAGTCACAGATGATGGCGCAGCCAAGGCAGAAGGGTATGGTGCAAGGTGCACAATTTA 660
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      ATACCGCCAATGCAGCTCAAGCATTACAAGGTATGCAGTCCATGGGAGTCATGGGTGGTA 720
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TGAGAGGAAATGGAACTATTCCATATAATCAGCAACGTTTTGCCCATGCACAAGCACAAT 780
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TGAGGCCGCAGCAGACATCACAGCAAGGCACACTGTCTCCACAGGTTGTGGGTCAAGGCT 840
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TGACAAGAACAGCATCGATTGCTGCATTAAATCCACAGCTACCTGGATCGTCGACAAATG 900
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      GGCCGATGGCACAAATGTCCCTTCCTCAGAAACAGCAGCAGGCAGCATGGTTAAAACAAA 960
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TGCAATCATCGCTGGGATCACCTGTTTCTCCACAACAATTTCAGCATCAACAAAGGATGC 1020
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TATTAATACATCAACTTCAACAGCAGTCAGGATTGAATCAACACCAAATCGCACAAACCC 1080
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      AACAACAGCATCCTCATCTCAATACCCAGCTTTTACAGCAGCAACACATTCTACAGCAAC 1140
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TTCAGCAACAACAACAATCTCCAAGGATATCAGCATCTGGTTCCCAGAAGTCCATGAACC 1200
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TGACAGGATCACAACCGGGCACTCCTTTATCAGGTGGAACTATGACTGGTGGAAGTGCAA 1260
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      GTCAAGGAGCAGAAGTAACTAATCAACTTCTTGGGAAGAGAAAAATACAAGATTTGGTTT 1320
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CACAGGTAGATCCCCTGGGCAAGGTTGATCCAGAAGTGGAAGATTTGCTTTTGGAGATTG 1380
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CTGATGACTTCATTGATTCGGTGACTGCATTTGCGTGTACCCTTGCGAAGCATAGGAAAT 1440
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CATCAGTCCTGGAAGCCAAGGATGTATTGCTGCACCTAGAAAAAAATTGGCACTTATCTG 1500
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TTCCTGGTTTCTTAAGGGAGGACAAGAATCCGCAAAGACATCCTGTAAAGGTATCAGTGG 1560
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      ACCCTCAACAACCAGAATGTGATGCTGCTGGTATTAGAAGCACAGGAAATAAATTGGTAA 1620
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      TTAACAATTCAGTTGCCAACCATCAAACAAGACCTCCGGTTACTGAGCCTTCACCAATGC 1680
consensus_14451#1      ------------------------------------------------------------
                                                                                   

consensus_14451#0      CCACAATGGGGCCTCTGTCAAAAGTGCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTG 1740
consensus_14451#1      -------------------------GCCCCGTTTCTAAGCATCATGCCTCCTCATCAGTG 35
                                                ***********************************

consensus_14451#0      CAAGGGAAAAGGGAAATTACAT-----GTTCTAGGACATTTCACATACAGCTTGGTATTA 1795
consensus_14451#1      CAAGGGAAAAGGGAAATTACATTACAGGTTCTAGGACATTTCACATACAGCTTGGTATTA 95
                       **********************     *********************************

consensus_14451#0      ATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTA 1855
consensus_14451#1      ATTAGTATCTAACTTGAGGATTGCTAGCAAATGGAAGCACAATAAATGTATGAGCATCTA 155
                       ************************************************************

consensus_14451#0      CGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGT 1915
consensus_14451#1      CGGGCAAAAGTGGGATGCTTGTGTTCTTTAAAGGAAAGAAGTTGCTGACTGACAGATTGT 215
                       ************************************************************

consensus_14451#0      TCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCT 1975
consensus_14451#1      TCGCGACAGCCTCATCCAGGAGCTCTTGTGTAACCTTATTAGAAGTATTCGTTGATCGCT 275
                       ************************************************************

consensus_14451#0      GTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGT 2035
consensus_14451#1      GTAGCTGACCCCTCTCGTTGTACATAAATGTTTTTTTGCGAACGGGGCAGCCCTTTTCGT 335
                       ************************************************************

consensus_14451#0      TCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACT 2095
consensus_14451#1      TCTTGTTGTTCCTATATAGATGTAGAACCCATATTATGGTATCGTGTATTTGCTACAACT 395
                       ************************************************************

consensus_14451#0      CATAAGTTGATCTAAAAGATCAGAAAAAAATGTCATTATATCGTGTCAAAAAAAAAAAAA 2155
consensus_14451#1      CATAAGTTGATCTAAAAGATCAGAANANAAAAAAAAAAAAAAA----AAAAAAAAAAAAA 451
                       ************************* * **    *  * *       *************