These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14467#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2644 fasta sequence [TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG-GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG-TGATCTT-GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC-TAAAT-AAAAGTGAATTAG-TTGATAGA-TTATGA-GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGA-----AACAAAAAAAAAAAAAAAAA] [+] EMBL AK105415 [TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGT ] [+] EMBL AK101324 [ CCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCAAACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGAGAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCGGCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGGTGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTGGGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTCCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGT CCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCG ] [+] EMBL CB631490 [ GGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAAGAAATTGTG ] [+] EMBL CF324284 [ GCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAA ] [+] EMBL CB677297 [ GAAGGACCCGGCGCACCGGACCAAGGTGGTGCTCCGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTCGGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGATATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTCTTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATATGCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATAATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTGCCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGA ] [+] EMBL AU062730 [ AGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAACCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATGGCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGTCCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATNCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTNGTTCTGCTCATGTCGCGGAAAACAAAAAAGAGAAAATTGTGCTT ] [+] EMBL AA749952 [ AATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTGGCTCTCAACATGATCAGGAAGGTCACATAATTACAGCTG ] [+] EMBL CB668247 [ AAGGGTCGATTCTAATACATCTGATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCTAGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAGGAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAGAAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCCATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTTACAAAATGCCCCCGAT ] [+] EMBL CF313068 [ AGATCAGGTAGTTGAAAATGCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGTGAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCTCGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCAATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAAATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACATGCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCTGATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAG GCAAGTGTGGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAA ] [+] EMBL BI805745 [ TGGTCTGAAGGAGATGGAAATTTCT CAAGCACATCTGANGGAAACCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAGNCCAAGTGT GGTTCAAAAATCAAGCTCGGCGACGTTGATCTTGGTCC ATGATGATACTCATC AAAC AATATTGCAAGTTGTGGA TTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAAC ANATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGANTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGA CCCTGGAGAATATACACGACCTCCACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTC CAGGTTA CGGTCCCATGTATCTAC AAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAaa aaa ] [-] EMBL CB631491 [ GGGTTCAAAAATCAAGCTCGGCGACG TGATCTT GTCCAATGATGATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTTTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTAT ] [-] EMBL CB668248 [ ATACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTCTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTACAAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAGGGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTtaagg ] [-] EMBL CB677298 [ TACTCATCAAAACAAATATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAATGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGCTTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCCACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTCTGGAGCAATGGAAGGATTTAGGTTGGCATCATTACCCTCGTGACAGTGGTCACATATTTTTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTTTAGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATTTACAAAAGAGAT AAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGT ] [+] EMBL AU033163 [ GATAAAAAAAAGGTANCAAGCTTCCCGGGTTGCNTAAATAAAAAGTGAATTAGNTTGATAGATTTATGAGGAATCCACTGTTTAGNCGGCTGCGACCGTGGNCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTANTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGATTGTTAACAAAAAAAAAAAAAAAA ] [-] EMBL CF313069 [ AAAAAAAGTTATCAGACTGCCTGGTTTGC TAAAT AAAAGTGAATTAG TTGATAGA TTATGA GAATCCACTGTTTAGGCGGCTGCGACCGTGGCCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATTTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATTTTGAGCAAGTTGTCGTGCTTCAAAAAAA A AAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14467#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence [NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATGGCCCAGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTGTTAANTATTTTTGAGACCCTGGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTTAGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTACAAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTGATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA] [-] EMBL AA752087 [NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATGGCCCAGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTGTTAANTATTTTTGAGACCCTGGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTTAGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTACAAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTGATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACCCTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGGATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCACCAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTTGCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14467#0 TCTCCTCTCTTCCTCTTCCCCCAATCTCCGACAGTTGCCAAATTTCCCTTCCCACCCCCA 60 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 AACCCAAACCCCAGCGACGACGGCGACGACGCGCAGCAGACGAAAGCGAGCGAGAGGCGA 120 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GAGAAATCCCATCGTTTCCCAAACCCTAACCCCCTCCTCCTCCTCCTCCAGATCTCGGCG 180 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCCGCGCGGCTGATGCGAGGTGAGCCCCGTCCGCCCTAGGGTTTGCGGCGGGGTGCGTGG 240 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 TGGTGGTGGTTGGGCCGGGGGGGACGGGGCCCTCCTGCTCGCGGGGGTGGGGGTTGGGTG 300 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GGGATGGCGGCGGCGCGCGCGCACGTGAAGGACCCGGCGCACCGGACCAAGGTGGTGCTC 360 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CGGAGGCTGCCGCCGGCGATCGCGCAGCAGGCCGTCGTGGAACAGGTCGACGCGCGCTTC 420 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GGCGGCCGGTACGACTGGTCGTGCTTCCGCCCCGGCAATGCCAGCCAAAAGAATCACAGA 480 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 TATTCTCGACTCTACCTTAACTTCAAGGGCCCAGAAGATGTCGTTGAATTTGCTGAGGTC 540 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 TTCAATGGTCATGTGTTTGTGAATGAAAAGGGTGCTCAATTTAAAGCTCTTGTGGAATAT 600 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCACCATCGCAACAGGTCCCCAAGTCAAACACGAAGAAAGATGCTCGTCAAGGAACTATA 660 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 ATGAAAGATCCGGAATACTTGGAGTTTCTTGAATCGATTTCAAAGCCTGCTGAGCATCTG 720 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CCAAGTGCTGAAATTCAGCTCGAAAGGAAAGAAGCTGAAAGGGCAGCTGCTGGAAAGGAA 780 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CCACCTGTTGTGACGCCTCTTATGGTCTATGTTCGCCAGCAAAGGGCAGCTAAGAGTATG 840 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCTCAGAGATCTGGAAGTAGTAGACTCAGTAGAAAAGTTGCGGGTGTTGTTACTAGCAGT 900 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CCTAGTCCTTCTAAAAGGGGTTCTGAGAAGCGCAGGACCTCTGCTTCGACGCAATATGTT 960 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCAT 1020 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCGCAGAGGGAAAAAGATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAA 1080 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 AACAAAAAAGAGAAAATTGTGCTTTTGAAAGGAAGAGCAAGGGTCGATTCTAATACATCT 1140 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GATGTCACATCTCAGCAGCAGTCAGGGACCCCTATGAAAAATGCTGCACAATCTAGTTCT 1200 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 AGGCAAGATCCGCGGCTTGAGGGCAGTGGCAGAATTATTAAGACTATACTTTCAAACAAG 1260 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GAAGGACGGCATGTGGTTACGTCTCAACATGATCAGGAAGGTCACATAATTACAGCTGAG 1320 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 AAGCGCCCACCACGGATTCCAAACCCACGTTCCGTTGTTAAAGATCAGGTAGTTGAAAAT 1380 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCTGAGAAAAACCATTTGGATGACAAACATAGTCATCTCCATGGTTCTGGGCTCATCAGT 1440 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GAAAAGACTGAAAGACATGCTAGAAATAGAGATAGGCCTGATCGTGGTGTATGGGCCCCT 1500 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 CGTCGCTATGACAAATCTGCATCAGGTGGGACGCATTCCTCGTCATCTGAGTTCTCACCA 1560 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 ATGCAGCAACATTCTGGTGAAAATTTCTGTCAGCAAGCAGATGGCCATGGAGAGAGAAAA 1620 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 ATAGACCCAAGGGGTCATGGTGGTATTCGCGGAGGCCCTGTGGAAAATGGACATAGACAT 1680 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GCTAACCGCCGTGGTCCTCCACGTGGTCTGAAGGAGATGGAAATTTCTGCAAGCACATCT 1740 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GATGGAAAGCCTTCAAAGAGAGCCTCTGCCAACTATGGTGCTCATGAGAGGCAAGTGTGG 1800 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 GTTCAAAAATCAAGCTCGGCGACGTGATCTTGTCCAATGATGATACTCATCAAAACAAAT 1860 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 ATTGCAAGTTGTGGAGTTCTGGATTTTGCAGCTTGATCCTGTGAAGTACTGTTAACAAAA 1920 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 TGCCCCCGATCATATGCTTCCATGAAGTGCAATCTCAGATTTGTCAATCGAAATCTCAGC 1980 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 TTTAGCTGAAAAGGGAGCTTATATGATTTGATTCACAGCAATAGTGAATTAACATAACCC 2040 consensus_14467#1 ------------------------------------------------------------ consensus_14467#0 ACTTTAGGTAGCTCTTGATTGCTTTGGGTGAGACTTGATTTGGGCCCAAGGTTGCTATTC 2100 consensus_14467#1 --------------NGGATAANAACCATTGGTGTTTGATGTTGGGGAAATGATG--GCCC 44 *** ** ***** * ** ** * ** * consensus_14467#0 TGGAGCAATGGAAGGATTTAGGTTGGCATCATTAC-CCTCGTGACAGTGGTCACATATTT 2159 consensus_14467#1 AGGTGTATTTGGACAAGGAAGATTAGGTGGATCATACCTTGNGACAGTG-TTAANTATTT 103 ** * * * * * * ** ** * ** * *** * ******* * * ***** consensus_14467#0 CTGAGACCCCTGGAGAATATACACGACCTCAACTAATCAGAGATGGGTGTACATATCTCT 2219 consensus_14467#1 TTGAGACCCT--GGGGATAAACACGACTTCAATTATTCAGAGATGGGTGAAAATATTTTT 161 ******** * * *** ******* **** ** ************* * **** * * consensus_14467#0 AGAGAAAGAAGAGGTCTGGTTCTGACTTCTGTTCGCAGGTTAGCGGTGCCATGTATCTAC 2279 consensus_14467#1 AGAGAAAGAAGAGTTCTGGTTCTGANTTCTGTTCGCAGGTTAGCGGTGCCATGTATNTAC 221 ************* *********** ****************************** *** consensus_14467#0 AAAAGAGATAAAAAAAAGTTATCAGACTGCCTGGTTTGCTAAATAAAAGTGAATTAGTTG 2339 consensus_14467#1 AAAAGAGATAAAAAAAAGTTATCAGACTGCNTGGTTTGCTAAATAAAAGTGAATTAGTTG 281 ****************************** ***************************** consensus_14467#0 ATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACC 2399 consensus_14467#1 ATAGATTATGAGAATCCACTGTTTAGGCGGCTGCGACCGTGGTCACCAACAGAAGTTACC 341 ************************************************************ consensus_14467#0 CTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGG 2459 consensus_14467#1 CTAGAGTGCAAAGTGGCATCTCATTTTGGTTTTGTGCCCCTGCCCCCCCTGAGTAACGGG 401 ************************************************************ consensus_14467#0 ATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCAC 2519 consensus_14467#1 ATGTGGTATTGTTTTGACATGTGGATGTTGATGGTGTGCGTCTTCCTGTTAATGTTTCAC 461 ************************************************************ consensus_14467#0 CAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTT 2579 consensus_14467#1 CAGATAATTATGGGGGTATTGTTAAGAATGATGATATGATGTACAGCATCAAAGGTGCTT 521 ************************************************************ consensus_14467#0 GCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAATGTGAAACAAAAAAAAAAAA 2639 consensus_14467#1 GCTGTTTTAATCTTGAGCAAGTTGTCGTGCTTCTATGAAAAAAAAAA------------- 568 **************************************** *** consensus_14467#0 AAAAA 2644 consensus_14467#1 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||