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Oryza sativa
cluster # 14477 cluster # 14477       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14477#0 length = 1226 sequences # 14  
consensus_14477#1 length = 495 sequences # 2  

consensusID : consensus_14477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1226
fasta sequence
                              [GAAGGAGTAGAAAGAGACAGCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTG-AATTCTCGTGCTACGATCACCCGGTTGTGTTGAC-GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAGGATAA-TCCTCCTGATCTAGCAGATTTT-GTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAG-CCTAAAG-TTCAGAACAAGGGTGCAGAAAAG-ACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAG-CAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACC--------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF332437             [GAAGGAGTAGAAAGAGACAGCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGCCGCCGCCGCG GGGCCATGGGGTACACCAAGGAGCAGCTCCTCGTGCGACTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK071237             [                  AGCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAGGATAA TCCTCCTGATCTAGCAGATTTT GTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCT   GTGAAGGCTAAG CCTAAAG TTCAGAACAAGGGTGCAGAAAAG ACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAG CAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATG                                                                                              ]
[+] EMBL AU078611             [                   GCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGNCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGGTTGTNTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTNCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGNTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTNGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF276420             [                      TCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAGGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAGGATAA TC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF300884             [                                CCTACTCGTCTCCTTCCTTCCTTCCGCCGCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL OSC106661            [                                             gcgcnTCCTTCCGCCGNNGCCGGCGNCGTCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGANTCCAGGAGCTCAACATTG AATTCTCGTGCTACGATCACCCGNNTGTGTTGACNGGTGGAGGAACAGGCCAAACATGTTGGGCATTNAGGAGGTGCTTTGAGTAAAAATTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU102109             [                                                         GCCGCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTCCAGGAGCTCAACATTGAAATTCTCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAA TGCTGTCTCACTACTACTGGACCAA GTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB000082             [                                                                                                           CCTCGCGCGACTCCAGGAGCTCAACATTG AATTCCCGTGCTACGATCACCCGGTTGTGTTGAC GGTGGAGGAACAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGACAAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATTTTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTGCTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCTGCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTCCATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTCATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAGGATAA TCCTCCTGATCTAGCAGATTTT GTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C96774               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAATTCCTCCTGATCTAGCAGATTTTNGTCCCATCAGGTGTCCCAAATTCTGCAGACCCAATTGAGAAGGTCACNCCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAG CCTAAAG TTCAGAACAAGGGTGCAGAAAAG ACGCAGAGCAAGATNCCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAG CAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACC        AAAAAA                                                                   ]
[+] EMBL C96670               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGATCTAGCAGATTTT GTACCTTCAGGTGTCCCAAATTCTGCAGAACCNATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAGCCCTAAAGTTTCAGAACAAGGGTGCAGAAAAGCACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGNCAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACC        AAAAAA                                                                   ]
[-] EMBL CF276421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTACCATCAGGTGTCCCAAATTCTGCAGAACCAATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAG CCTAAAG TTCAGAACAAGGGTGCAGAAAAG ACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTTTGAGGTATCAAAGAAACTGAATGTTAAG CAGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTTTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTT  A          AAAAAAAAAAAA                                                             ]
[-] EMBL CF300883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCAAAATGATGTGCCCAAAGAGAAAACATGTCTTCCTGAAGTGAAGGGTAAG CCTAAAG TTCAGAACAAGGGTGCAGAAAAG ACGCAGAGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTTTGAGGTATCAAAGAAACTGAATGTTAAG CAGGAAGAACTTTTTTTTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTTTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTTTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGA          AAAAAAAA                                                                 ]
[+] EMBL AU068368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTTGCCATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAG CAGNAAGAACTTTCCCCTANATTTGATGGCTTTAAAGGACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCNGCATACACCGCTGGATTTGAGGCTGGCNTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACNATGGACATAAGTCGATTCAGTGAANTTTGTATGACATTTAGTGTNAAANCGNNCNAATTATAAATTATGCTTTCCTTTGA          AAAAAAAAAAAAAAA                                                          ]
[+] EMBL CF328900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACCTGTTGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14477#0 GAAGGAGTAGAAAGAGACAGCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCC GCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTC CAGGAGCTCAACATTGAATTCTCGTGCTACGATCACCCGGTTGTGTTGACGGTGGAGGAA CAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGAC AAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATT TTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTG CTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCT GCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTC CATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTC ATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAG GATAATCCTCCTGATCTAGCAGATTTTGTACCATCAGGTGTCCCAAATTCTGCAGAACCA ATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACA TGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTGCAGAAAAGACGCAG AGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATC ATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCAGGAAGAACTT TCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACG AGTCTGAAGAATGCAGCATACACCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAAT TCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATA AGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATG CTTTCCTTTGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14477#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 495
fasta sequence
                              [CAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTCAGAAAAGACGCAGAGCAGATACCTACAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCACGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATAC-ATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACCTGTTGTCTAAAAAAAATTTGCTCAATTTTTCAAGAAGGTTGAGAGATCAACC]

[+] EMBL BI796428             [CAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTCAGAAAAGACGCAGAGCAGATACCTACAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCACGGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGACGAGTCTGAAGAATGCAGCATACACCCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATAC ATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTATGCTTTCCTTTGACCTGTTGTCTAAAAAAAA                                    ]
[-] EMBL AA750378             [                                                                                                                                                                                                                                                                                ctCGCAGCATTTGAGGCTGGCTTCGAGACTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACATAAGTCGATTCAGTGCNTTTTGTATGACATTTAGTGTAAAATCGATGAAATTATAAATTATGCTTTCCTTTGACCTGTTGTCTACTTCATGTTTGCTCAATTTTTCAAGAAGGTTGAGAGATCAACC]


>consensus_14477#1 CAAGAGAAAACATGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTCAG AAAAGACGCAGAGCAGATACCTACAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTA TTTGACATCATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCAC GGAAGAACTTTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAG TGTAACGACGAGTCTGAAGAATGCAGCATACACCCGCTGGATTTGAGGCTGGCTTCGAGA CTATGCTCAATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATA CATGGACATAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATT ATAAATTATGCTTTCCTTTGACCTGTTGTCTAAAAAAAATTTGCTCAATTTTTCAAGAAG GTTGAGAGATCAACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14477#0      GAAGGAGTAGAAAGAGACAGCCTCGCCTTTGCCCTACTCGTCTCCTTCCTTCCTTCCGCC 60
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      GCCGCCGCCGCCGCCGCGAGGGCCATGGGGTACACCAAGGAGCAGCTCCTCGCGCGACTC 120
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      CAGGAGCTCAACATTGAATTCTCGTGCTACGATCACCCGGTTGTGTTGACGGTGGAGGAA 180
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      CAGGCCAAACATGTTGGGCATTTAGGAGGTGCTTTGAGTAAAAATTTGCTACTGAAGGAC 240
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      AAAAAGCATAGGCTGTACGTTGTTTCTGCCCTTGCTGGCACCAAAGTTGACATGAAAATT 300
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      TTATCACAGCGTCTTGGTTTGGGAAAAGGTGGTCTGCGGATGGCTCCTGAGGAAAATTTG 360
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      CTTGAAGTGCTTCAGGTACCCTTAGGCTGTGTTACTCCATTTGCACTACTTAATGAGTCT 420
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      GCAAGTGCTGTCTCACTACTACTGGACCAAGGTTTCAAGTCAAAACAGAGCTGCTACTTC 480
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      CATCCACTGACAAATGATGTGACAATCGCTCTCAGCTCAAGCAATCTGGACAAGTTTCTC 540
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      ATGTCCATTGGGAGGCAACCAGCTTATGTAGACTTAGAGGCTTCACCAGTTGTAGGCAAG 600
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      GATAATCCTCCTGATCTAGCAGATTTTGTACCATCAGGTGTCCCAAATTCTGCAGAACCA 660
consensus_14477#1      ------------------------------------------------------------
                                                                                   

consensus_14477#0      ATTGAGAAGGTCACACCTACAAATGTTCCTCGTCAAAATGATGTGCCCAAAGAGAAAACA 720
consensus_14477#1      ------------------------------------------------CAAGAGAAAACA 12
                                                                        ***********

consensus_14477#0      TGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGTGCAGAAAAGACGCAG 780
consensus_14477#1      TGTCTTCCTGAAGTGAAGGCTAAGCCTAAAGTTCAGAACAAGGGT-CAGAAAAGACGCAG 71
                       ********************************************* **************

consensus_14477#0      AGCAAGATACCTACAAACGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATC 840
consensus_14477#1      AGCA-GATACCTACAA-CGGAGCTAATGTTGAGAAATTTGTAAATGATGTATTTGACATC 129
                       **** *********** *******************************************

consensus_14477#0      ATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCA-GGAAGAACT 899
consensus_14477#1      ATGTCCCCGTTGTTCCTTTCTGAGGTATCAAAGAAACTGAATGTTAAGCACGGAAGAACT 189
                       ************************************************** *********

consensus_14477#0      TTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGAC 959
consensus_14477#1      TTCTTCTATATTTGATGGCTTTAAAGAACAAGCCACTATTGATTTGGAGAGTGTAACGAC 249
                       ************************************************************

consensus_14477#0      GAGTCTGAAGAATGCAGCATACACC-GCTGGATTTGAGGCTGGCTTCGAGACTATGCTCA 1018
consensus_14477#1      GAGTCTGAAGAATGCAGCATACACCCGCTGGATTTGAGGCTGGCTTCGAGACTATGCTCA 309
                       ************************* **********************************

consensus_14477#0      ATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACAATGGACA 1078
consensus_14477#1      ATTCAGGTTTAAAAGGACAGGCTTCTCGGAAGTAAATTGTTTCTTTTAATACA-TGGACA 368
                       ***************************************************** ******

consensus_14477#0      TAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTA 1138
consensus_14477#1      TAAGTCGATTCAGTGAATTTTGTATGACATTTAGTGTAAAATCGATCAAATTATAAATTA 428
                       ************************************************************

consensus_14477#0      TGCTTTCCTTTGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1198
consensus_14477#1      TGCTTTCCTTTGACCTGTTGTCTAAAAAAAATTTGCTCAATTTTTCAAGAAGGTTGAGAG 488
                       ***************        ********       **      ** **     * * 

consensus_14477#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAA 1226
consensus_14477#1      ATCAACC--------------------- 495
                       *  **                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)