These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14479#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1989 fasta sequence [CCGGAATTTCACGCGCACCCTCCCACTCCACACTCTCCTCCCAAAAATTTCCCCCCCCTAAAACCCTAGCTTAGCTCCCCCCGCGCGCCCATGGCCTCCGACGCCAAGCCCGACTCCCCGCCCGCCGGCGTCGACCCCCCGCCGCCCAAGGAGGAGGCGAAGGCGGAGAAGGAGGGGGAGGGGGAGGAGCCGCAGTCGGGGGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGATTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT-A-AAACAGGTGAA-TTTGGAATTTTTGGTTCTTGTGTCAAAAAAAAAAAAAGGG] [+] EMBL AK067886 [CCGGAATTTCACGCGCACCCTCCCACTCCACACTCTCCTCCCAAAAATTTCCCCCCCCTAAAACCCTAGCTTAGCTCCCCCCGCGCGCCCATGGCCTCCGACGCCAAGCCCGACTCCCCGCCCGCCGGCGTCGACCCCCCGCCGCCCAAGGAGGAGGCGAAGGCGGAGAAGGAGGGGGAGGGGGAGGAGCCGCAGTCGGGGGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGATTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT A AAACA ] [+] EMBL CB657288 [ AGAAGGAGGGGGAGGGGGAGGAGCCGCAGTCGGGGGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCATGCGACTGCTGAAGGCGCTTCTGATGGGAAGACAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCT ] [+] EMBL CB657029 [ AGAACGTGGGGGAGGGGGAGGAGCCGCAGTCGGGGGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAGAACGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGATTCTGAGGATGCATCAATGGGTGAGGAAGATGATGACGATTCTGAAGCAAAAGATAATGCTGGG ] [+] EMBL CB619939 [ AGCCCCCTTACAACACCCCCACCATCGAGAGGCCCTCCAGGGAGAGGAAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGGTTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAANAGATAATGCTGGGAGTGATGAA ] [+] EMBL CA764431 [ TCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCCGCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTATCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAATCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGACAATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAGTTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGGAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGGTTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCGACAGATG ] [+] EMBL AK058422 [ ACATGTTTCCAGAGCAGCCACAAAGAAGGAGGAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTTCTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCGACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAAGCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGATTCTGAGGATGCATCAATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAA ] [+] EMBL AU030959 [ TGGGAGTGATGAAGAACCTGATGAGCCTCCAGCAAAGANAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAAGAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCTTCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAA ] [-] EMBL CB657030 [ AGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTCAAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT A AAACAGGTGAA TTTGGAATTTTTGGT ] [-] EMBL CB657289 [ ATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGTAA AAACA GCGAATTTTGGAATTTTTGGTTCTTGTGTCAAAAAAAAAAAAAGGG] [-] EMBL CB633276 [ ATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCAGATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTGGGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT ATTCAAAGG A TTGGAATTTTTGGTTCTTG ] [-] EMBL CB626641 [ AAGGAAAAGATGGCCAGAACAATAATTCTGGTGCATTGAACAATAAGGCACGCAAGAAGGATGCTGCCAAGCCACCCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGCCCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCAGATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTTTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACCCCCCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTTTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT A AACCAGAAG A TTTGGAATTTTTGGT ] [-] EMBL CB619940 [ CTGCCAAGACAACCAATAAAAATAAAGGAAAAGGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTTAGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAATTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATTGAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGATGACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAGTAATTCAGCGGACCAGATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTTTAGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACCCCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTGGGTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT A AAAC GGGGAA TTTGGAATTTTTGGTTC ] [+] EMBL AU030958 [ TTCAAAGGAAGATGCTGATGNTGACGAGAAGTAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCTANCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT A AAACA GTGAA TTTGGAAaaaa ] [+] EMBL AA750182 [ AGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGAACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTT ] consensusID : consensus_14479#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 227 fasta sequence [ACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGTAAAACAGTGAATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAA] [+] EMBL AU058341 [ACACACCTAGTTGTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGTAAAACAGTGAATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAA] consensusID : consensus_14479#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 138 fasta sequence [AGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAGGATGAAGGAAAAGATGGCCAGAACATAATTCTGGTCATTGAACATAAGGCACCCCCAGAAGGATGCTGCCAAGACAAAAAAAAAAA] [+] EMBL BI803689 [AGAGTGATGTTACTGTAGATAAAACCACCAAGAAGGCTTCTAAATCCAAAAGGATGAAGGAAAAGATGGCCAGAACATAATTCTGGTCATTGAACATAAGGCACCCCCAGAAGGATGCTGCCAAGACAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14479#0 CCGGAATTTCACGCGCACCCTCCCACTCCACACTCTCCTCCCAAAAATTTCCCCCCCCTA 60 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AAACCCTAGCTTAGCTCCCCCCGCGCGCCCATGGCCTCCGACGCCAAGCCCGACTCCCCG 120 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 CCCGCCGGCGTCGACCCCCCGCCGCCCAAGGAGGAGGCGAAGGCGGAGAAGGAGGGGGAG 180 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GGGGAGGAGCCGCAGTCGGGGGGGCGGAAGCGCGGGCGGCGGAAGAAGGGGGAGGCGGAG 240 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AAGGAGAAGGAGAAGCCCCCGCCCGCCACCCCCACCATCGAGAGGCCCTCCAGGGAGAGG 300 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AAGACCGTCGAGCGCTACTCCGAGCTCGCCCCCCGCGTCACCCCCGCCAAGAAGTCCCCC 360 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GCCATTCTCCAGGGCTCTGGATCGAAGCTGAAGGACATTCCCAACATTCAATTCAAACTA 420 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TCAAAAAGAAAGGCAGACGAGAACCTGCAAAGTCTTCATGTTTTAATGTATGGAAGAAAA 480 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TCAAATGTCCATTTCTTGAAGAGAAACATATCCCAATTTTCTGGTTTTGTTTGGACTGAC 540 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AATCAGGAAAAACAAAGGACCAGGATAAAGGAAAAGCTTGACAAATTTAACAAGGAGAAG 600 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TTGCTGGATTTTTGTGAAATCCTTGATATACATGTTTCCAGAGCAGCCACAAAGAAGGAG 660 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GAAGTCTCTGCCAAATTACTGGAATTTTTGGAGTCCCCTTGCATCACTAGAGATGTTGTT 720 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 CTCACTGATGATAAGAAAGGGAAGAAACGTGGAAGGAGATCTAAAGGAAATGGCCAGGCG 780 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 ACTGCTGAAGGCGCTTCTGATGGGAAGAAAAGGAGAAAGAGTCGAAAGCAATCAACTGAA 840 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GCTGCTAAAGAGAATGACGATGAAGACGATGAGGGTCCTGCTGATTCTGAGGATGCATCA 900 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 ATGGGTGAGGAAGATGATGAGGATTCTGAAGCAAAAGATAATGCTGGGAGTGATGAAGAA 960 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 CCTGATGAGCCTCCAGCAAAGAAAAAGGCAACAGATGATAAACAAACAAAAAAGGCAAAA 1020 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GAAAAGGATGCGACTGCCAAGAAGGCTTCTACAAGACCTGCAAAAGGTGTGTCTAAGCCT 1080 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TCTCAAGACACTGAAGAAGATGATGAGCCAGAAGTTGAGTTAGAAAGCAAAAAGGTTGTC 1140 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 --------------------------ACACACCTAGTTGTTGTGCTTGACTTTGGTGTGA 34 consensus_14479#0 AAAAAAGTCTCAAAGAGTTCAAAGGAGAGTGATGTTACTGTAGATAAAACCACCAAGAAG 1200 consensus_14479#2 -------------------------AGAGTGATGTTACTGTAGATAAAACCACCAAGAAG 35 consensus_14479#1 CTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGCTGTT-ATAACTTTGCTTAGGTA 93 * * * * **** **** * ** consensus_14479#0 GCT--TCTAAATCCAAAAAGGATGAAGGAAAAGATGGCCAGAACAATAATTCTGGTGCAT 1258 consensus_14479#2 GCT--TCTAAATCCAAAA-GGATGAAGGAAAAGATGGCCAGAACA-TAATTCTGGT-CAT 90 consensus_14479#1 GCTAGCCTGACTGTAATATGCA-GAATAATTCTTTGCCTGTTCCTTCCATTTATCCATGT 152 *** ** * * ** * * * *** * ** * * *** * consensus_14479#0 TGAACAATAAGGCACGCA-AGAAGGATGCTGCCAAGACAACCAATAAAAATAAAGGAAAA 1317 consensus_14479#2 TGAACA-TAAGGCACCCCCAGAAGGATGCTGCCAAGACAAAAAAAAAAA----------- 138 consensus_14479#1 AAAACAGTGAATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 212 **** * * * ** * ** * ** ** **** consensus_14479#0 GGAAAAGGCAGCACAGAGGCTGGGGCAGCCCCAACCACTGAAGAGCTGCATGCTGTTGTT 1377 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 AAAAAAAAAANAAAA--------------------------------------------- 227 consensus_14479#0 AGTGACATATTGAAGGAAGTTGACTTCAATACGGCGACATTGGCAGATATTCTTCGGCAA 1437 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TTAGGTACTCATTTTAAGATGGACCTCATGGATAGGAAATCAGAGGTGAAACACATTATT 1497 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GAGGAAGTAATAAATAGTATGTCTGATGATGAGGAAGGTGAGGAAGACAATGCTGAAGAT 1557 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GACAAAGACAAAAATGCTAAGGAGGAAAATTCAAAGGAAGATGCTGATGGTGACGAGAAG 1617 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TAATTCAGCGGACCACATGTGATGGTCGCTTGTGTTAGTGTTATGGATGCAGGACTTTCT 1677 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AGCCCAACATTGCCGTTTGGGCTGTGTTGGGTCTGTACAATGAGGGCACCGCAACAATGA 1737 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 ACTGGTGACCTGGGGGTAGTACAAGGTTGTTAACAATTTGATAGCCACACACACCTAGTT 1797 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 GTTGTGCTTGACTTTGGTGTGACTTGTAGTCTAGTTGCTGGTCATGTACAATAGCTGTGC 1857 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TGTTATAACTTTGCTTAGGTAGCTAGCCTGACTGTAATATGCAGAATAATTCTTTGCCTG 1917 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 TTCCTTCCATTTATCCATGTAAAACAGGTGAATTTGGAATTTTTGGTTCTTGTGTCAAAA 1977 consensus_14479#2 ------------------------------------------------------------ consensus_14479#1 ------------------------------------------------------------ consensus_14479#0 AAAAAAAAAGGG 1989 consensus_14479#2 ------------ consensus_14479#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||