These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14480#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1589 fasta sequence [TGGACTGAAGGAGTAGAAAACGTCTCCACGCCGTCGTCGTCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG-CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATAAAAAAAAAA] [+] EMBL CF328374 [TGGACTGAAGGAGTAGAAAACGTCTCC CGCTGTCGTCGTCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTC ] [+] EMBL CB645757 [ acctcccctCGACTCCACGCCGTCGTCGTCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGATGAAATTTCTTCCGGTAGAGGGAAA ] [+] EMBL AK101017 [ TCTCCACGCCGTCGTCGTCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCGCCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGGCTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGA ] [+] EMBL AK103194 [ ACGCCGTCGTCGTCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATAc ] [+] EMBL OSC103941 [ GTCGTCGACCTCACCGGCGGNTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACG ] [+] EMBL CB671591 [ TCGACCTCACCGGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGATGAAACTTGGGCCGACTTTC AGAAGAATGGTT ] [+] EMBL CB639966 [ GGCGGCTGCCTCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACTCCCATCGGCGCCCTGCTCTGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCC ] [+] EMBL CB646206 [ CGGAGAAGCACATCACATCATGGCTCCTCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGCCCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGGCTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGAGGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGCCCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGC ] [+] EMBL OSR10441A [ TCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGNCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGNACGTGCAATAGCAGCTCGTGATAGCGGCACATTTTCTTGGGAA ] [+] EMBL OSR0826A [ TCGGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGTTGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACGGGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGATGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCATTTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCA ] [-] EMBL CB671592 [ AATTTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAAACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCC ] [-] EMBL CB645758 [ AGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGC ] [-] EMBL CB646207 [ AATTCAGCGAAGCTGAGGAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTATAAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCTTCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTACAACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAG CCAACCAGAAGCTTCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAA ] [+] EMBL AU162398 [ AAACTTCACAAATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAGCCCAACCAGAAGCTNCTTGGTATNCCTTCGGGAAAGCTTANCCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCCTATTGGTTGCAGTGNTGCGAGAATCATAGTCA TTTGCTCGGGATTCTTAGACATAAAAATGGNAAGATTGGGGTTGCTGGAGTTTGCAATGGNGGTGGTGGTGCTTCTGCCCTTGTTGTGGAANTCATGCAACCATCACTATTTACACGTTCCNCGTTGTGAAGTTGGCGCGAGCNAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAAAAAAAA ] [+] EMBL BQ907752 [ GTT CAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATT GGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTAC ATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGC ATAATAAGGGAAAAGAAGGCCATAGGAATAAAAAAAAAA] consensusID : consensus_14480#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 422 fasta sequence [ATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATTATCTGACTTGATGCAGGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATACTTTGCATTCTCTTGATGCTTGATAACTCTTCAACAGTAATCAAAAA] [+] EMBL AU222493 [ATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAATGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGTGGAACTCATTATCTGACTTGATGCAGGCAACCATCACTATTTACACGTTCCTCGTTGTGAAGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTTCATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAACGTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGCCATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATACTTTGCATTCTCTTGATGCTTGATAACTCTTCAACAGTAATCAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14480#0 TGGACTGAAGGAGTAGAAAACGTCTCCACGCCGTCGTCGTCGACCTCACCGGCGGCTGCC 60 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TCCCTACCCCCACCTACTCCGGCGGCGGCGCGGCGGAGAAGCACATCACATCATGGCTCC 120 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TCCTCCGCACTCGGACTCTGACCTGCTCAAGCCGAGAGACGTCTGCATCGTGGGCGTCGC 180 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 CCGCACGCCCATCGGCGCCCTGCTCGGCTCCCTCTCCTCCCTCCCCGCCACCAAGCTCGG 240 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 CTCCGTCGCCATCCAGGCCGCTCTCAGGAGAGCAAATGTGGAGCCGGCGCTCGTGCAGGA 300 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 GGTCTTCATGGGGAACGTTCTCAGCGCCAACCTTGGCCAAGCCCCGGCGAGGCAAGCCGC 360 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 CCTAGGCGCCGGCTTGCCCGACACTGTGCCCTGCACCACCGTCAACAAAGTTTGCTCCTC 420 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 GGGGATGAAGGCTGTCATGCTTGCGGCGCAGACTATTCAGCTTGGGATGCATGATGTTGT 480 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TGTCGCTGGTGGGATGGAGAGCATGTCCAATGCCCCCAAATATGTCGCGGCAGCAAGACG 540 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 GGGGTCACGGTTTGGGCACGACGTCCTCATCGATGGGATGCTCAAGGATGGGCTGTGGGA 600 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TGTGTATAATGATTTCCCAATGGGAATGTGTGCCGAGTTGTGTGCGGATCAACACTCCAT 660 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TTCAAGGGAGGAGCAGGATCTTTATGCTATCCAGAGCAATGAACGTGCAATAGCAGCTCG 720 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TGATAGCGGCACATTTTCTTGGGAAATTGCTCCGGTTGAAATTTCTTCCGGTAGAGGGAA 780 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 ACCACCACTTATTGTTGACAAGGATGAGAGTCTTGCAAAGTTCAATTCAGCGAAGCTGAG 840 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 GAAACTTGGGCCGACTTTCAAGAAGAATGGTTCTGTAACTGCCGGCAATTCTTCTAGTAT 900 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 AAGTGATGGTGCTGCTGCAATCGTGCTAGTCAGTGGACAGAAAGCCAAGAGTCTTGGCCT 960 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TCAAGTTATTGCAAGGATCAGAGGGTATGCGGATGCTGCTCAGGCACCTGAATTATTTAC 1020 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 AACTACTCCAGCTCTTGCTATTCCAAAGGCTGTATCAAATGCGGGTCTCCAAACTTCACA 1080 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 AATAGATTATTATGAGATAAACGAAGCTTTCTCCGTCGTTGCTTTAGCCAACCAGAAGCT 1140 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TCTTGGTATTCCTTCGGGAAAGCTTAACCTAAGTGGTGGTGGTGTTTCTCTGGGCCATCC 1200 consensus_14480#1 ------------------------------------------------------------ consensus_14480#0 TATTGGTTGCAGTGGTGCGAGAATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAA 1260 consensus_14480#1 ----------------------ATCATAGTCACTTTGCTCGGGATTCTTAGACATAAAAA 38 ************************************** consensus_14480#0 TGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGT 1320 consensus_14480#1 TGGAAAGATTGGGGTTGCTGGAGTTTGCAATGGAGGTGGTGGTGCTTCTGCCCTTGTTGT 98 ************************************************************ consensus_14480#0 GGAACTCAT-----------------GCAACCATCACTATTTACACGTTCCTCGTTGTGA 1363 consensus_14480#1 GGAACTCATTATCTGACTTGATGCAGGCAACCATCACTATTTACACGTTCCTCGTTGTGA 158 ********* ********************************** consensus_14480#0 AGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTT 1423 consensus_14480#1 AGTTGGCGCGAGCAAAAATAGCACAAAGCTGAACTGTAAAGTACAGTAGCTCTATGTTTT 218 ************************************************************ consensus_14480#0 CATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAAC 1483 consensus_14480#1 CATCTTATATTACTTAATTTTACTGGGCGTTCATCCATGATGTACAATGATAGAAGGAAC 278 ************************************************************ consensus_14480#0 GTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGC 1543 consensus_14480#1 GTTGTAAAAATAAGATGGCTGTGCACTACCGCACGAGTCTTGTATAACTTGTATAGCGGC 338 ************************************************************ consensus_14480#0 CATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATAAAAAAAAAA-------------- 1589 consensus_14480#1 CATAGCAATAATAAGGGAAAAGAAGGCCAGAGGAATACTTTGCATTCTCTTGATGCTTGA 398 ************************************* * consensus_14480#0 ------------------------ consensus_14480#1 TAACTCTTCAACAGTAATCAAAAA 422 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||