cluster # 14496

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Oryza sativa
cluster # 14496 cluster # 14496 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14496#0 length = 1195 sequences # 11
consensus_14496#1 length = 402 sequences # 2

consensus_14496#2 length = 366 sequences # 2
consensus_14496#3 length = 170 sequences # 1

consensusID : consensus_14496#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1195
fasta sequence

                              [CGCANACTGCAGCTCACGCTCACCCTGTCACACTCACTCCAGTGTAGTGTACCGCAGCGCGAGC-TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACGCTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTT-CC-AGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTCGACGCCGCGGGGCGCGGCCGCTGCGCCACGGGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCCGCCGGCC-ACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGGGGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGCCTACGGCGCGCCGCAGTACTGCTGCACCGGCCAGTTCGGGAGCCCGCAGCAGTGCAAGCCGACGGCGTACTCCCGGCTGTTCAAGACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTCACCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTAGCGGTTGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAGCTGGTTTTGGTGCNAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029396             [CGCANACTGCAAGTCACGCTCACCCTGTNACACTCACTCCAGTGTAGTGTACCGCAGCGCGAGC TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGAACNTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTTACC AG TGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C74064               [          AGCTCACGGTCACCCTGTCACACTCACTCCAGTGTAGTGTACCGCAGCG GAGC TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACGTTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGNAG TGCTCGCGCGCGGCGGGTT CC AGCTGGCGCCCAACCGNGCanct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK108191             [           GCTCACGCTCACCCTGTCACACTCACTCCAGTGTAGTGTACCGCAGCGCGAGC TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACGCTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTT CC AGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTCGACGCCGCGGGGCGCGGCCGCTGCGCCACGGGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCCGCCGGCC ACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGGGGTGTATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGCCTACGGCGCGCCGCAGTACTGCTGCACCGGCCAGTTCGGGAGCCCGCAGCAGTGCAAGCCGACGGCGTACTCCCGGCTGTTCAAGACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTCACCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTAGCGGTTGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAAG                                                                         ]
[+] EMBL AU197340             [                         TGTCACACTCACTCCAGTGTAGTGTACCGCAGCGCGAGC TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACGCTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTT CC AGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C74268               [                         TGTCACACTCACTCCAGTGTAGTGTACCGCAGCGCGAGCTTTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACNCTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTT CCAAGCTGGCGCCCAACCGNGNCAACTCCATCCG CTTNCCGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA754606             [                                                       AGCGCGAGC TTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGCGTCGGCGGCGACGCTGGCGCTGTACAACCGGTGCGCGGAGACGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTT CC AGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTCGACGCCGCGGGGCGCGGCCGCTGCGCCACGGGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCCGCCGGTC ACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCAGGGTTCCGGCGCCAACTGCGTCCCCGCGGAGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGACCTCGCCGTCCGCGGGGGAGGCGGCGACTACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGCCTACGGGGCTGCGCAGTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU085798             [                                                                                                                                                                                                                                                                                                                                                                    GGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGC NGCCGCCGGCCNACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGGGGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU108795             [                                                                                                                                                                                                                                                                                                                                                                    GGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGC NGCCGCCGGCCNACGCTGGCGGAGATCACCCTCGCGTCCACNCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGGGGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB965601             [                                                                                                                                                                                                                                                                                                                                                                     GCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCCGCCGGCC ACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGGGGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGCCTACGGCGCGCCGCAGTACTGCTGCACCGGCCAGTTCGGGAGCCCGCAGCAGTGCAAGCCGACGGCGTACTCCCGGCTGTTCAAGACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTCACCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTAGGTGCTGATGTACTGGGATCTTCTTGATGCTGGTGATG                                                                                                                                                                                                                                        ]
[+] EMBL CA756527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTCCATCCTCACCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAG                                                                                                                                                                                              ]
[+] EMBL AU166929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACCTGNTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAANACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTAGCGGTTGGTTTGGGTATAACGTNAGGANATNTGGTGGTCTACCNCTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAANAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAGCTGGTTTTGGTGCNAAAAAAAAAAAAAAAAAAA]




>consensus_14496#0
CGCANACTGCAGCTCACGCTCACCCTGTCACACTCACTCCAGTGTAGTGTACCGCAGCGC
GAGCTTTGCAGGGAGCAATGGCGATGGCGGTGCGGGTCGCGGCGGGGCTCGTCGTCGCGC
TGCTGCTCGCGGGCGACGCGTCGGCGGCGACGCTGGCGCTGTACAACCGGTGCGCGGAGA
CGGTGTGGCCGGGCATCCAGCCGAGCGCCGGCAAGGAGCTGCTCGCGCGCGGCGGGTTCC
AGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGCCGGCTGGTCCGGCCGCGTCT
GGGGCCGCCAGGGCTGCAGCTTCGACGCCGCGGGGCGCGGCCGCTGCGCCACGGGCGACT
GCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCCGCCGGCCACGCTGGCGGAGA
TCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGACGTGAGCCTCGTCGACGGCT
ACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGGCGCCAACTGCGTCCCCGCGG
GGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCTCGCCGTCCGCGGCGGCGGCG
GCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGCCTACGGCGCGCCGCAGTACT
GCTGCACCGGCCAGTTCGGGAGCCCGCAGCAGTGCAAGCCGACGGCGTACTCCCGGCTGT
TCAAGACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTCA
CCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTAGACAGCGT
AACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGC
TTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTG
ATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGG
TTGTACTGTAGTTTTAGCGGTTGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCA
CTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAAGAACTGAAACTAGTAATAT
GTTTGTTTCCGTTCAATTTCAGCTGGTTTTGGTGCNAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14496#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 402
fasta sequence

                              [GTAACCTTNTGCCCCGACCGNCCCTAAAAACCCGTACCCCAACCCAAAGAAAGATTTGCTCCCCACNCATCATGAACAATGGCAAAGACCCCTAGCTTAAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCNTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTANCGGTTGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029390             [GTAACCTTNTGCCCCGACCGNCCCTAAAAACCCGTACCCCAACCCAAAGAAAGATTTGCTCCCCACNCATCATGAACAATGGCAAAGACCCCTAGCTTAAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCNTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTANCGGTTGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAAAAAAAAAAA                                   ]
[+] EMBL CB097147             [                                                                                                                                                                                                                                                                                                                TGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14496#1
GTAACCTTNTGCCCCGACCGNCCCTAAAAACCCGTACCCCAACCCAAAGAAAGATTTGCT
CCCCACNCATCATGAACAATGGCAAAGACCCCTAGCTTAAGTCATGGTGCATGGCATTGT
TGTTGCTGATGTTCTTGGTTCTTCNTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAA
TAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTANCGGTTGG
TTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGG
TATATGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14496#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 366
fasta sequence

                              [AANCCGACGGCGTACNCCCGGCTGTTCAANACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTNACCTGNTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTANACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C97270               [AANCCGACGGCGTACNCCCGGCTGTTCAANACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGACGACCCGACCTCCATCCTNACCTGNTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTANACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGNNTTAAAAAAAAAAAAAAAAAAAAA                               ]
[+] EMBL AU108794             [                                                                                                                                                            AGCAAAGNTTTGCTTCCCACTCATCATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTNTTNTTGCTGATGTTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14496#2
AANCCGACGGCGTACNCCCGGCTGTTCAANACGGCGTGCCCCAAGGCCTACTCCTACGCC
TACGACGACCCGACCTCCATCCTNACCTGNTCCGCCGGTGCGTCCTACATCGTCACCTTC
TGCCCGCACCGCCGCTANACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCAT
CATGAACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATG
TTCTTGGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATA
CTATTATTAGNNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

consensusID : consensus_14496#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 170
fasta sequence

                              [CAGCGCGAGCTTNTGCAGGNAGCAATNGCGATNGCGGTGCGGGTCGCGGCGGGNCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGNGTCGGCGGCGACGGTGNGCGCTNTACAACCGNTTCGCGGAGACGGTGTNGCCNGGCATCCATCCGAGCGNCNTCAANGAGCTGC]

[+] EMBL AU069965             [CAGCGCGAGCTTNTGCAGGNAGCAATNGCGATNGCGGTGCGGGTCGCGGCGGGNCTCGTCGTCGCGCTGCTGCTCGCGGGCGACGNGTCGGCGGCGACGGTGNGCGCTNTACAACCGNTTCGCGGAGACGGTGTNGCCNGGCATCCATCCGAGCGNCNTCAANGAGCTGC]




>consensus_14496#3
CAGCGCGAGCTTNTGCAGGNAGCAATNGCGATNGCGGTGCGGGTCGCGGCGGGNCTCGTC
GTCGCGCTGCTGCTCGCGGGCGACGNGTCGGCGGCGACGGTGNGCGCTNTACAACCGNTT
CGCGGAGACGGTGTNGCCNGGCATCCATCCGAGCGNCNTCAANGAGCTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14496#0      CGCANACTGCAGCTCACGCTCACCCTGTCACACTCACTCCAGTGTAGTGTACCGCAGCGC 60
consensus_14496#3      ------------------------------------------------------CAGCGC 6
consensus_14496#2      -----------------------AANCCGACGGCGTACNCCCGGCTGTTCAANACGGCGT 37
consensus_14496#1      ---GTAACCTTNTGCCCCGACCGNCCCTAAAAACCCGTACCCCAACCCAAAGAAAGATTT 57
                                                                                   

consensus_14496#0      GAGCTTT-GCAGGGAGCAATGGCGATGGCGGTGC--GGGTCGCGGCGGGGCTCGTCGTCG 117
consensus_14496#3      GAGCTTNTGCAGGNAGCAATNGCGATNGCGGTGC--GGGTCGCGGCGGGNCTCGTCGTCG 64
consensus_14496#2      GCCCCAAGGCCTACTCCTACGCCTACGACGACCC--GACCTCCATCCTNACCTGNTCCGC 95
consensus_14496#1      GCTCCCCACNCATCATGAACAATGGCAAAGACCCCTAGCTTAAGTCATGGTGCATGGCAT 117
                       *  *              *          *   *           *              

consensus_14496#0      CGCTGCTGCTCGCGG-GCGACGCGTCGGCGGCGACGCTGG--CGCTGTACAACCGGTGCG 174
consensus_14496#3      CGCTGCTGCTCGCGG-GCGACGNGTCGGCGGCGACGGTGNG-CGCTNTACAACCGNTTCG 122
consensus_14496#2      CGGTGCGTCCTACATCGTCACCTTCTGCCCGCACCGCCGCTANACAGCGTAACCCAACCC 155
consensus_14496#1      TGTTGTTGCTGATGTTCTTGGTTCTTCNTGATGCTGTTGATGCGTCATGTATTAGTGCCG 177
                        * **   *                          *  *           *       * 

consensus_14496#0      CGGAGACGGTGTGGCC-----GGGCATCCAGC--------CGAGCGCCGGCAAGGA-GCT 220
consensus_14496#3      CGGAGACGGTGTNGCC-----NGGCATCCATC--------CGAGCGNCNTCAANGA-GCT 168
consensus_14496#2      AAGCAAAGAT-TTGCT-----TCCCACTCATCA-------TGAACAATGGCAAAGACGCT 202
consensus_14496#1      TAATAATAATAATACTATTATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTANCGGT 237
                            *   *    *         **   * *         *  *            * *

consensus_14496#0      GCTCGCGCGCGGCGGGTTCCAGCTGGCGCCCAACCGCGCCACCTCCATCCGCCTCCCCGC 280
consensus_14496#3      GC---------------------------------------------------------- 170
consensus_14496#2      AGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTTGGTTCTTCTTGATGCTG 262
consensus_14496#1      TGGTTTGGGTATAACGTGAGGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGG 297
                                                                                   

consensus_14496#0      CGGCTGGTCCGGCCGCGTCTGGGGCCGCCAGGGCTGCAGCTTCGACGCCGCGGGGCGCGG 340
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      TTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATTATTAGNNTTAAAAAAAA 322
consensus_14496#1      AGGTATATGGGTATATGGAAGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCA 357
                                                                                   

consensus_14496#0      CCGCTGCGCCACGGGCGACTGCGGCGGGGCGCTCTACTGCAACGGCGCCGGCGGCGCGCC 400
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------- 366
consensus_14496#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------- 402
                                                                                   

consensus_14496#0      GCCGGCCACGCTGGCGGAGATCACCCTCGCGTCCACCCCGGCCGCGCAGGACTTCTACGA 460
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      CGTGAGCCTCGTCGACGGCTACAACATCCCCATCGCCATGACCCCGTCCCACGGCTCCGG 520
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      CGCCAACTGCGTCCCCGCGGGGTGCATCAGCGACCTCAACCGCGTCTGCCCCGCCGGCCT 580
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      CGCCGTCCGCGGCGGCGGCGGCGACAACCGCGTCGTCGGATGCCGCAGCGCCTGCGCCGC 640
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      CTACGGCGCGCCGCAGTACTGCTGCACCGGCCAGTTCGGGAGCCCGCAGCAGTGCAAGCC 700
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      GACGGCGTACTCCCGGCTGTTCAAGACGGCGTGCCCCAAGGCCTACTCCTACGCCTACGA 760
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      CGACCCGACCTCCATCCTCACCTGCTCCGCCGGTGCGTCCTACATCGTCACCTTCTGCCC 820
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      GCACCGCCGCTAGACAGCGTAACCCAACCCAAGCAAAGATTTGCTTCCCACTCATCATGA 880
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      ACAATGGCAAAGACGCTAGCTTTAGTCATGGTGCATGGCATTGTTGTTGCTGATGTTCTT 940
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      GGTTCTTCTTGATGCTGTTGATGCGTCATGTATTAGTGCCGTAATAATAATAATACTATT 1000
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      ATTAGCATTAAACCAGTGGGTTGTACTGTAGTTTTAGCGGTTGGTTTGGGTATAACGTGA 1060
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      GGAGATCTGGTGGTCTACCACTGGTAGGCCGGGAAAGGAGGAGGTATATGGGTATATGGA 1120
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      AGAACTGAAACTAGTAATATGTTTGTTTCCGTTCAATTTCAGCTGGTTTTGGTGCNAAAA 1180
consensus_14496#3      ------------------------------------------------------------
consensus_14496#2      ------------------------------------------------------------
consensus_14496#1      ------------------------------------------------------------
                                                                                   

consensus_14496#0      AAAAAAAAAAAAAAA 1195
consensus_14496#3      ---------------
consensus_14496#2      ---------------
consensus_14496#1      ---------------