cluster # 14507

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Oryza sativa
cluster # 14507 cluster # 14507 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14507#0 length = 856 sequences # 14
consensus_14507#1 length = 437 sequences # 1

consensus_14507#2 length = 327 sequences # 1
consensus_14507#3 length = 255 sequences # 1

consensusID : consensus_14507#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 856
fasta sequence

                              [GAGTAGAAACTCTCAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT-CCCCTATGCCAGATCTGGCAGGAAGGGAGGT-GG--C-GGCGCCGCCA-TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC-TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG-GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG-CCCCT-CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCACCTATTTAATTTTCACATTAGTGCCGCCTTCACGGTGCCGGTTGGGAAAACCGACACCAATCTCTTTTTCGGTGGTAGTGCCACGTAATTGGCCCTCCCCTTCGTGCTATCGGTGGATTGGGAGTGACTGCATGCTCTCGAGTTATGGAAAATAAAATGGATG]

[+] EMBL CF333359             [GAGTAGAAACTCTCAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGTGGG  CGGGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTANCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGA                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF299458             [cAGTAGAAACTCTCAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCTCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGTGGG  CGGGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF280616             [             CAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF337990             [              AGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GGGCCGGGCGCCGCCATTCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTANCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTANATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTC                                                                                                                                                                                                                                                                 ]
[+] EMBL AK120300             [                CCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGG GGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCACCTA                                                                                                                                                               ]
[+] EMBL CK085358             [                            TCTCAGCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGACAGATCTGGCCGGAGGG GATGCGGTGGCGCCTACCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSR00471A            [                                 GCTCTCTCTCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACG CCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGTCAGATCTGGCAGGAAGGGAGGT GG  C GGTGCCGCCA TCCCGTTCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU030091             [                                  CTCTCTCTCTCTCTCGCTCCATNTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTNGGAGGGGAGGCGGCGGCAAC NNCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCG CG CA TNCCGTCCGCTCCATCCAACGGGAGGGGATGCGGCGGCGGCCCGACAACTTTTNGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK062576             [                                         TCTCTCTCGCTCCATCTCTCTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCACCTATTTAATTTTCACATTAGTGCCGCCTTCACGGTGCCGGTTGGGAAAACCGACACCAATCTCTTTTTCGGTGGTAGTGCCACGTAATTGGCCCTCCCCTTCGTGCTATCGGTGGATTGGGAGTGACTGCATGCTCTCGAGTTATGGAAAATAAAATGGATG]
[+] EMBL C74133               [                                                                  CACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGCAGCAGTGGGAGGGGAGGCGGCGGCAACGCCNTCNCCTCCGCTCCATCCAGCGGGAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTNGCCGGAGGGNGATGCGGTGGCGCCTAGCAACTGGAGGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF333360             [                                                                                                                                                                                  GCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCGCCCCCTCCCTCCT TACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAAaaa                                                                                                                                                                                                                                                                     ]
[+] EMBL AU108931             [                                                                                                                                                                                                  GACGGCTTGGGTTTTGCAGCGGCACCCT CCCCTATGCCAGATCTGGCAGGAAGGGAGGT GG  C GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAAaaaa                                                                                                                                                                                                                                                                    ]
[+] EMBL AU088646             [                                                                                                                                                                                                                                                                     GGCGCCGCCA TCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAAC TCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCG CCCCT CCTCCTCTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCAaaaaaaa                                                                                                                                                                                                ]
[-] EMBL CF337991             [                                                                                                                                                                                                                                                                                                                                                  CCTCTGCCAGATCTGGCCGGAGGG GATGCGGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCGCCCCCT CCTCCT TACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCAaaaaaaaaa                                                                                                                                                                                                               ]




>consensus_14507#0
GAGTAGAAACTCTCAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCT
CTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGC
AGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGC
GGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCTATGCCAGATCTGG
CAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGG
CGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGGGATGC
GGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCGCCCCTCCTCCTCTA
CATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTG
GAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGC
TCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCC
TTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTA
GATGTCGTTTCGAAACCAACACAGGAACTGGCACCTATTTAATTTTCACATTAGTGCCGC
CTTCACGGTGCCGGTTGGGAAAACCGACACCAATCTCTTTTTCGGTGGTAGTGCCACGTA
ATTGGCCCTCCCCTTCGTGCTATCGGTGGATTGGGAGTGACTGCATGCTCTCGAGTTATG
GAAAATAAAATGGATG

consensusID : consensus_14507#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence

                              [GAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCCTATGCCAGATCTGGCAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGGGATGCGGTGGCGCCTAGCAACTGGAGGGGAGACGGCGAGAGAGGAGTCTCGCCCCTCCTCCTTTACATCGGGAGACGGTGGCTTCCCTCGGCAGCGCTCTTCATTCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCGAGATTTAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATC]

[-] EMBL CF299459             [GAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCCTATGCCAGATCTGGCAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGGCGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGGGATGCGGTGGCGCCTAGCAACTGGAGGGGAGACGGCGAGAGAGGAGTCTCGCCCCTCCTCCTTTACATCGGGAGACGGTGGCTTCCCTCGGCAGCGCTCTTCATTCGGCGATGGCGGCGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCGAGATTTAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATC]




>consensus_14507#1
GAGGGGCGGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCCTATGCC
AGATCTGGCAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGG
GGATGCGGCGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGA
GGGGATGCGGTGGCGCCTAGCAACTGGAGGGGAGACGGCGAGAGAGGAGTCTCGCCCCTC
CTCCTTTACATCGGGAGACGGTGGCTTCCCTCGGCAGCGCTCTTCATTCGGCGATGGCGG
CGGCGGTGGAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGT
TGATGTGCTCTTGATTAATGATGTTCGAGATTTAAAAAAAAAAAAAAAAACAATGTCATG
CCGTTACGTAGCGTATC

consensusID : consensus_14507#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 327
fasta sequence

                              [CCCTCCTCCTTTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTTTTCATCCGGCGATGGCGGCGGCGGTGGAAACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCCCCTATTTAATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF281207             [CCCTCCTCCTTTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTTTTCATCCGGCGATGGCGGCGGCGGTGGAAACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCCCCTATTTAATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14507#2
CCCTCCTCCTTTACATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTTTTCATCCGGCGAT
GGCGGCGGCGGTGGAAACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATAT
GATGTTGATGTGCTCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTG
ATGAATGATGTCCTTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTT
TTTGGGATCATTAGATGTCGTTTCGAAACCAACACAGGAACTGGCCCCTATTTAATTTTC
AAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14507#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 255
fasta sequence

                              [CCTNTACNTCGGGCGNCGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGNGNTGGCGGCGGCGGTGGAGACGGTTNTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCNCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTNGGATCAGCTTGATTCGAGCCGNGTCGNTNTTNTTTTTAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU030092             [CCTNTACNTCGGGCGNCGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGNGNTGGCGGCGGCGGTGGAGACGGTTNTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGCNCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCCTTGATGTGCTNGGATCAGCTTGATTCGAGCCGNGTCGNTNTTNTTTTTAAAAAAAAAAAAAAAAAAAAA]




>consensus_14507#3
CCTNTACNTCGGGCGNCGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGNGNTGGCGGCG
GCGGTGGAGACGGTTNTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTG
ATGTGCNCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATG
ATGTCCTTGATGTGCTNGGATCAGCTTGATTCGAGCCGNGTCGNTNTTNTTTTTAAAAAA
AAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      GAGTAGAAACTCTCAGCCTCGTCACCTCTCTCAGCTCTCTCTCTCTCTCGCTCCATCTCT 60
consensus_14507#1      ------------------------------------------------------------
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      CTCCACCACACAACGGTGGTGGCTTGGTGGAGGCGGACCGGCGACAGAAAGGGAGGCCGC 120
consensus_14507#1      ------------------------------------------------------------
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      AGCAGTGGGAGGGGAGGCGGCGGCAACGCCCTCCCCTCCGCTCCATCCAGCGGGAGGGGC 180
consensus_14507#1      ----------------------------------------------------GAGGGGCG 8
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      GGTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCTATGCCAGATCTGG 240
consensus_14507#1      GTGGAGGTGGTCCGACGGCTTGGGTTTTGCAGCGGCACCCTCCCCCTATGCCAGATCTGG 68
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      CAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGG 300
consensus_14507#1      CAGGAAGGGAGGTGGCGGCGCCGCCATCCCGTCCGCTCCATCCAGCGGGAGGGGATGCGG 128
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      CGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGGGATGC 360
consensus_14507#1      CGGCGGCCCGACAACTCTGGCGGCGTCGTCCCCTCTGCCAGATCTGGCCGGAGGGGATGC 188
                                                                                   

consensus_14507#2      -----------------------------------------------CCCTCCTCCTTTA 13
consensus_14507#3      ------------------------------------------------------CCTNTA 6
consensus_14507#0      GGTGGCGCCTAGCAACTGGAGGGGTGGCGGCGAGAGAGGAGTCTCGCCCCTCCTCCTCTA 420
consensus_14507#1      GGTGGCGCCTAGCAACTGGAGGGGAGACGGCGAGAGAGGAGTCTCGCCCCTCCTCCTTTA 248
                                                                             *** **

consensus_14507#2      CATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTTTTCATCCGGCGATGGCGGCGGCGGTG 73
consensus_14507#3      CNTCGGGCGNCGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGNGNTGGCGGCGGCGGTG 66
consensus_14507#0      CATCGGGCGACGGTGGCTTCCCTCGGCAGCGCTCTTCATCCGGCGATGGCGGCGGCGGTG 480
consensus_14507#1      CATCGGGAGACGGTGGCTTCCCTCGGCAGCGCTCTTCATTCGGCGATGGCGGCGGCGGTG 308
                       * ***** * *********************** ***** *** * **************

consensus_14507#2      GAAACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGC 133
consensus_14507#3      GAGACGGTTNTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGC 126
consensus_14507#0      GAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGC 540
consensus_14507#1      GAGACGGTTCTTGATGTGTTCGTTCTTGATGTCTTCTTGATGAATATGATGTTGATGTGC 368
                       ** ****** **************************************************

consensus_14507#2      TCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCC 193
consensus_14507#3      NCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCC 186
consensus_14507#0      TCTTGATTAATGATGTTCTAGATGAATGTGATGTTGATGTGTTCTTGATGAATGATGTCC 600
consensus_14507#1      TCTTGATTAATGATGTTCGAGATTTAAAAAAAAAAAAAAAAACAATGTCATGCCGT-TAC 427
                        ***************** ****  *    *     *        **        * * *

consensus_14507#2      TTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTA 253
consensus_14507#3      TTGATGTGCTNGGATCAGCTTGATTCGAGCCGNGTCGNTNTTNTTTTTAAAAAAAAAAAA 246
consensus_14507#0      TTGATGTGCTCGGATCAGCTTGATTCGAGCCGAGTCGGCATTATTTTTTTGGGATCATTA 660
consensus_14507#1      GTAGCGTATC-------------------------------------------------- 437
                        *   **                                                     

consensus_14507#2      GATGTCGTTTCGAAACCAACACAGGAACTGGCCCCTATTTAATTTTCAAAAAAAAAAAAA 313
consensus_14507#3      AAAAAAAAA--------------------------------------------------- 255
consensus_14507#0      GATGTCGTTTCGAAACCAACACAGGAACTGGCACCTATTTAATTTTCACATTAGTGCCGC 720
consensus_14507#1      ------------------------------------------------------------
                                                                                   

consensus_14507#2      AAAAAAAAAAAAAA---------------------------------------------- 327
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      CTTCACGGTGCCGGTTGGGAAAACCGACACCAATCTCTTTTTCGGTGGTAGTGCCACGTA 780
consensus_14507#1      ------------------------------------------------------------
                                                                                   

consensus_14507#2      ------------------------------------------------------------
consensus_14507#3      ------------------------------------------------------------
consensus_14507#0      ATTGGCCCTCCCCTTCGTGCTATCGGTGGATTGGGAGTGACTGCATGCTCTCGAGTTATG 840
consensus_14507#1      ------------------------------------------------------------
                                                                                   

consensus_14507#2      ----------------
consensus_14507#3      ----------------
consensus_14507#0      GAAAATAAAATGGATG 856
consensus_14507#1      ----------------