cluster # 14508

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Oryza sativa
cluster # 14508 cluster # 14508 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14508#0 length = 849 sequences # 15

consensus_14508#1 length = 450 sequences # 1
consensus_14508#2 length = 298 sequences # 1

consensusID : consensus_14508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 849
fasta sequence

                              [CAGTCATCAGTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC-GTCGGGGAACCCGGAGCTGCTGGTG-ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG-CCGGCAGCTCGGTCACC-GTCGTCGGGAGG-GACGACATCGCGGCGCCGGTGAGGGAG-CTG-TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC-GGCGTA-CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA-CACGACACATGTCGCA-GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAACTTCCATTCCAGATCAATAGTACAATTATTCATCAAAAAAATGAGAATTATAAAAGTAACAAAAAAAAGA]

[+] EMBL AK062126             [CAGTCATCAGTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTT                                                                                  ]
[+] EMBL AK120284             [         GTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCTAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAACTTCCATTCCAGATCAATAGTACAATTATTCATCAAAAAAATGAGAA                       ]
[+] EMBL CB685897             [                    GGCCATCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCTGCGGCGGATGCGGCGTCCGCGCACCTGCGCTTCTTCTTGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCTCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACTACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGT                                                                                                                ]
[+] EMBL CB646506             [                    GGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACTGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACCAGT                                                                                                                                       ]
[-] EMBL CB679192             [                             CAGCAAGCTCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCCTGGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATAGGGACAAGTCCATTCCATGTGTTG                                                                                                                        ]
[+] EMBL CB679191             [                                     TCTCCTCGGCGTTCGCGCTCGCCGTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCACCTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTT                                                                                                                         ]
[-] EMBL CB683398             [                                                                                                                                              CGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAACTTCCATTCCAGATCAATAGTACAATTAGTCATCAAAAAAATGAGAATTATAAAAGTAACAAAAAAAAGA]
[+] EMBL CB684709             [                                                                                                                                                         GCGGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAACTTCCATTCCAGATCAATAGTACA                                              ]
[-] EMBL CB685898             [                                                                                                                                                           GGCGCCGACGGCGGTGCAGGTGGTGAACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTTGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATATTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAGCTTCCATTCCAGATCAATAGTACAATTATTCAT                                     ]
[+] EMBL CF196219             [                                                                                                                                                                                     ACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB684680             [                                                                                                                                                                                                          GCGACCCTATAGTGATCGACGACGTGCTGACGGCGGCGGCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGCCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGA                                                                                     ]
[+] EMBL BI805615             [                                                                                                                                                                                                                                             tCGTCGAGCC GTCTTCGTC GC GTTGTGC GGCCAAGGGCCAGTACGTGTGGGCTTCTTTCGGGGAACCCGGATCTTCTGGTGTACCATGGAGTTGCTGCTGACGTCGGGCCCGTTCGTCCGGCAGCTCGGTCACCTGTCNTCGGGAGGTGACGACATCGCGGCGCCGGTGAGGGAGTCTGTTCGGTGGTC GCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAAaaaaa                                                                        ]
[+] EMBL OSS1842A             [                                                                                                                                                                                                                                                                                   GGGGCAGTACGTGTGGGCGTC GTCGGGGAACCCGGAGCTGCTGGTG ACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCG CCGGCAGCTCGGTCACC GTCGTCGGGAGG GACGACATCGCGGCGCCGGTGAGGGAG CTG TCGGTGGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGCCGCCGNCGNCGGCCACCGTGTGCTTGCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTNTGCCAACA CACGACANATGTCGCA GCTTCCACGGATGCTACACTAACTTACACTATACTACTA                                                                                                                                                                                        ]
[-] EMBL CB965959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCGTGAGTTCTCCTCCGCCGCCGCCGGCCTCCGTGTTCTTGCTTCC GGCGTATCGTGGTGGTGGCATGACGTGGCGTGTGCCAGCATCACATCACATGTCTCATTCTTCCTCGGATTCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTTATAATTCATGAGATTTGTCAATTATCAACTTCCATTCCAGATCAATAGTACA                                              ]
[+] EMBL CB681861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTTCCTTCC GGCGTA CGTGGTGGTGGCATGACGTGGCGTGTGCCAGCA CACGACACATGTCGCA GCTGCCACGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAA                                                                      ]




>consensus_14508#0
CAGTCATCAGTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCC
GTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCAC
CTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTG
AACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCG
GCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCG
GGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGC
AGCTCGGTCACCGTCGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGGTG
GTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGC
CTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGC
CGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGCATGACGTGGCG
TGTGCCAGCACACGACACATGTCGCAGCTGCCACGGATGCTACACTACCTTACACTATAC
TACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCATTC
CATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATCAAC
TTCCATTCCAGATCAATAGTACAATTATTCATCAAAAAAATGAGAATTATAAAAGTAACA
AAAAAAAGA

consensusID : consensus_14508#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [CCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGATCCTATCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCGGGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGCAGCTCGGTCACCGTCGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGCTGCGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTTTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTAGATGTCTACGTCAACCCCTGAGATACAGCTCCCTCCCCCCGGCCACGATGTGGTTCCTTCCGGCGTAGGTGGTGGAGGCACGACGTAGCGTCTCCCAGCTCAGCACCCATTTCACAGTCGCCACCAATTCTAC]

[-] EMBL CB684681             [CCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGATCCTATCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCGGGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGCAGCTCGGTCACCGTCGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGCTGCGTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTTTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTAGATGTCTACGTCAACCCCTGAGATACAGCTCCCTCCCCCCGGCCACGATGTGGTTCCTTCCGGCGTAGGTGGTGGAGGCACGACGTAGCGTCTCCCAGCTCAGCACCCATTTCACAGTCGCCACCAATTCTAC]




>consensus_14508#1
CCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCGGCGATCCTATCGTC
GGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCGGGGAACCCGGAGCT
GCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGCAGCTCGGTCACCGT
CGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGCTGCGTCGGCGGCACGG
GGGAGTTCAGGATGGCGTCCGGCTACGTCCTTTGGAAGACGGTCAGCCTCGACCACCCCA
ACGCCATCCTCGAGCTAGATGTCTACGTCAACCCCTGAGATACAGCTCCCTCCCCCCGGC
CACGATGTGGTTCCTTCCGGCGTAGGTGGTGGAGGCACGACGTAGCGTCTCCCAGCTCAG
CACCCATTTCACAGTCGCCACCAATTCTAC

consensusID : consensus_14508#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 298
fasta sequence

                              [GATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGCATGACGTGGCGTGTGCCAGCACACGACACATGTCGCAGCTGCCNCGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCNCCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGNGATTTGTCAATTATCAACTTCCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU097637             [GATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGCATGACGTGGCGTGTGCCAGCACACGACACATGTCGCAGCTGCCNCGGATGCTACACTACCTTACACTATACTACTATACTATACTAGTACTGCCNCCCAGCCAGTGACGAATAATATGGACAAGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGNGATTTGTCAATTATCAACTTCCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14508#2
GATCGCCGCCGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGCAT
GACGTGGCGTGTGCCAGCACACGACACATGTCGCAGCTGCCNCGGATGCTACACTACCTT
ACACTATACTACTATACTATACTAGTACTGCCNCCCAGCCAGTGACGAATAATATGGACA
AGTCCATTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGNGATTTGTCA
ATTATCAACTTCCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14508#0      CAGTCATCAGTGTTCGCCATGGCAAGCAGCAGCAAGCTCTCCTCGGCGTTCGCGCTCGCC 60
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      GTCGTCGTCCTGCTGCTCGCCGGCGGGGTGATGCCGGCGGCGGAGGCGGCGTCGGCGCAC 120
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      CTGCACTTCTTCATGCACGACACGCTGACGGGGGCGGCGCCGACGGCGGTGCAGGTGGTG 180
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      AACGGTCCGCGGAGCCACTTCGGCGACACGATCGTGATCGACGACGTGCTGACGGCGGCG 240
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      GCGAGCCGGTCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGTACGTGTGGGCGTCGTCG 300
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      GGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGTCGGGGCCGTTCGCCGGC 360
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      AGCTCGGTCACCGTCGTCGGGAGGGACGACATCGCGGCGCCGGTGAGGGAGCTGTCGGTG 420
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      GTCGGCGGCACGGGGGAGTTCAGGATGGCGTCCGGCTACGTCCTCTGGAAGACGGTCAGC 480
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      ------------------------------------------------------------
                                                                                   

consensus_14508#0      CTCGACCACCCCAACGCCATCCTCGAGCTCGACGTCTACGTCAACCCCTGAGATCGCCGC 540
consensus_14508#2      ---------------------------------------------------GATCGCCGC 9
consensus_14508#1      ------------------------------CCACTTCGGCGACACGATCGTGATCGACGA 30
                                                                          ***** ** 

consensus_14508#0      CGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGC-ATGACGTGGC 599
consensus_14508#2      CGCCGCCGCCGGCCACCGTGTGCTTGCTTCCGGCGTACGTGGTGGTGGC-ATGACGTGGC 68
consensus_14508#1      CGT-GCTGACGGCGGCGGCGATCCTATCGTCGGCGGCGGTGGGGCGGGCCAAGGGGCAGT 89
                       **  ** * ****  * * *  * *     *****   **** *  *** * *  *  * 

consensus_14508#0      GTGTGCCAGCA-CACGACACATGTCGCAGCTGCCACGGATGCTACAC-TACCTTACACTA 657
consensus_14508#2      GTGTGCCAGCA-CACGACACATGTCGCAGCTGCCNCGGATGCTACAC-TACCTTACACTA 126
consensus_14508#1      ACGTGTGGGCGTCGTCGGGGAACCCGGAGCTGCTGGTGACCATGGAGGTGGTGCTGACGT 149
                         ***   **  *       *   ** ******    **   *  *  *       **  

consensus_14508#0      TACTACTATACTATACTAGTACTGCCACCCAGCCAGTGACGAATAATATGGACAAGTCCA 717
consensus_14508#2      TACTACTATACTATACTAGTACTGCCNCCCAGCCAGTGACGAATAATATGGACAAGTCCA 186
consensus_14508#1      CGGGGCCGTTCGCCGGCAGCTCGGTCACCGTCGTCGGGAGGGACGACATCG-CGGCGCCG 208
                            *  * *      **  * * * **      * ** * *  * ** * *    ** 

consensus_14508#0      TTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGAGATTTGTCAATTATC 777
consensus_14508#2      TTCCATGTGTTGTTAGTTGTTACCGTGGCGTGTAATAATTCATGNGATTTGTCAATTATC 246
consensus_14508#1      GTGAGGGAGCTGTC-GCTGCGTCGGCGGCACGGGGGAGTTCAGGA----TGGCGTCCGGC 263
                        *    * * ***  * **   * * ***  *    * **** *     ** *      *

consensus_14508#0      AACTTCCATTCCAGATCAATAGTACAATTATTCATCAAAAAAATGAGAATTATAAAAGTA 837
consensus_14508#2      AACTTCCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------- 298
consensus_14508#1      TACGTCCTTTGGAAGACGGTCAGCCTCGACCACCCCAACGCCATCCTCGAGCTAGATGTC 323
                        ** *** **  *                       **    *                 

consensus_14508#0      ACAAAAAAAAGA------------------------------------------------ 849
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      TACGTCAACCCCTGAGATACAGCTCCCTCCCCCCGGCCACGATGTGGTTCCTTCCGGCGT 383
                                                                                   

consensus_14508#0      ------------------------------------------------------------
consensus_14508#2      ------------------------------------------------------------
consensus_14508#1      AGGTGGTGGAGGCACGACGTAGCGTCTCCCAGCTCAGCACCCATTTCACAGTCGCCACCA 443
                                                                                   

consensus_14508#0      -------
consensus_14508#2      -------
consensus_14508#1      ATTCTAC 450