cluster # 14514

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Oryza sativa
cluster # 14514 cluster # 14514 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14514#0 length = 790 sequences # 14

consensus_14514#1 length = 548 sequences # 1
consensus_14514#2 length = 542 sequences # 2

consensusID : consensus_14514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 790
fasta sequence

                              [CAGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATC-TCGCCACGAGC-GGATCTGCGCCTGC-GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG-ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC-GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAAAAATTGCTTCTTCGTTTGCTGATCACCAGATGGATGGCGTGTTTTCCAGATGAAACCATGGACTTTCTGTAGCTGGTTGCTACCTATGTCATTGATTGGTTCCTAATTTCCTAACTAAAAAAAAAAAAAA]

[+] EMBL CF279588             [CAGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGATTGTTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTT                                                                                                                                                                                                                                                                          ]
[+] EMBL CF278991             [CAGGCCCACTTTCGAAAATCCCCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTGTATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGTTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAA                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF292131             [CAGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTAC                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK058874             [ AGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAAT                                                                                                                                                     ]
[+] EMBL CF291213             [                    CCCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAA                                                                                                                                                                                                                                         ]
[+] EMBL CF333102             [                     CCAACCCATATCGCGCAGTTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCT CCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTA                                                                                                                                                                                                                                                                        ]
[+] EMBL BP184376             [                                       TTCCCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCC                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C73279               [                                          CCACTTCCATC TCGCCACGAGC GGATCTGCGCCTGC CNTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGACGGAGGAATCGAAGCCTNCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTNATTTCCGTATNGGCATTTCCAGCCATTCAT                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU075659             [                                             CTTCCATCTTCGCCACGAGCGGGATCTGCGCNTGCGGCTCTCCCCCCTTNGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAaaaaa                                                                                                                                     ]
[+] EMBL BP184922             [                                                                          acgagg GCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCTCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAAAAAa                                                                                                                              ]
[+] EMBL AB110195             [                                                                                          CCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCGGCTCCGGCCCCGGCGGCATCCCCATCAAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTT                                                                                                                                               ]
[-] EMBL CF292132             [                                                                                                                                                     AAGGCTG ATCAGGACTCGGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTATTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAAAAA                                                                                                                               ]
[-] EMBL CF278990             [                                                                                                                                                                                                                                                                     ATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCATGCGCTTGCTTCTTCGTTTGCTGATCACCAGATGGATGGCGTGTTTTCCAGATGAAACCATGGACTTTCTGTAGCTGGTTGCTACCTATGTCATTGATTGGTTCCTAATTTCCTAACTAAAAAAAAAAAAAA]
[-] EMBL CF279587             [                                                                                                                                                                                                                                                                                       GAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGAC GAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCATGCGCTTGCTTCTTCGTTTGCTGATCACCAGATGGATGGCGTGTTTTCCAGATGAAACCATGGACTTTCTGTAGCTGGTTGCTACCTATGTCATTGATTGGTTCCTAATTTCCTAACTAAAAAAAAAAAAAA]




>consensus_14514#0
CAGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATCTCGCCAC
GAGCGGATCTGCGCCTGCGCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCG
GCTCCGGCTCCGGCGGCATCCCCATCAAGGCTGATCAGGACTCGGATGGCTCGGCGCAGA
GCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCC
AATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGT
TGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTA
AGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGC
AGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTC
ATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTT
GTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTC
TGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAA
AAATTGCTTCTTCGTTTGCTGATCACCAGATGGATGGCGTGTTTTCCAGATGAAACCATG
GACTTTCTGTAGCTGGTTGCTACCTATGTCATTGATTGGTTCCTAATTTCCTAACTAAAA
AAAAAAAAAA

consensusID : consensus_14514#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 548
fasta sequence

                              [GGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCACCTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAAATTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAAAAAAAAAAAAAAAAACACTGTCATCCGTTACGTAGCGTATCGTTACAGCAA]

[-] EMBL CF291212             [GGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCACCTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAAATTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCAAAAAAAAAAAAAAAAAACACTGTCATCCGTTACGTAGCGTATCGTTACAGCAA]




>consensus_14514#1
GGATGGCTCGGCGCAGAGCACTGCTGATATGACCGCTTTCGTGCAAAATCTTCTGATGCA
GATGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGG
CGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGA
AGGTATTACCCCACCTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGA
ATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATC
GACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTT
TTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGT
TTTACTGTGAAATTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAG
GTTTGTTTAGATTCAAAAAAAAAAAAAAAAAACACTGTCATCCGTTACGTAGCGTATCGT
TACAGCAA

consensusID : consensus_14514#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 542
fasta sequence

                              [GTGAGTAACTTTGTTCACATGGCGGGGCGATGCGAATTTCATGCAATCACTTCACTTTTACTGAATTGTAACTTTCTTGCAGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAACTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF291505             [GTGAGTAACTTTGTTCACATGGCGGGGCGATGCGAATTTCATGCAATCACTTCACTTTTACTGAATTGTAACTTTCTTGCAGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAACTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAAAAAA                              ]
[+] EMBL CF319676             [                                                                                                                                                                                          cATGG  ACTGAGGGTATTACCCCAACTAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14514#2
GTGAGTAACTTTGTTCACATGGCGGGGCGATGCGAATTTCATGCAATCACTTCACTTTTA
CTGAATTGTAACTTTCTTGCAGCAAACCAGGTTCCAATCTATGTCAGAGAACATCATTTC
AAAGATAGATGAAATGGGCGCAAGAATTGATGAGTTGGAGCAGAGCATCAATGACCTCAA
GGTTGAGATGGGCACTGAAGGTATTACCCCAACTAAGCCAAAGGACGAAGAATCGAAGCC
TGCGGGTAGCTCTGCCGAATGAAAGAAACAGAAGCAGTTGAAATGGTAGCATGCCATTCC
AGATTTGATTTCCGTATCGACATCTCCAGCCATTCATCACTGACAAACTACATGCTGTAA
GATCTTAGCAGGGCACTTTTATGCATCTGAGATTTGTGGTAGCAGTTGAGAATCTCTCTT
ATAGATGTTGTTGCATGTTTTACTGTGAACTTCTCTGTGGATATTGTACTGTACTGCGCA
GAGCAATGATCATAATAGGTTTGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14514#0      CAGGCCCACTTTCGAAAACCCCCAACCCATATCGCGCAGTTCCCACTTCCATCTCGCCAC 60
consensus_14514#1      ------------------------------------------------------------
consensus_14514#2      ------------------------------------------------------------
                                                                                   

consensus_14514#0      GAGCGGATCTGCGCCTGCGCTCTCCCCCCCTCGCCGGCGGCAAGCCTATGGCGGCTCCCG 120
consensus_14514#1      ------------------------------------------------------------
consensus_14514#2      ------------------------------------------------------------
                                                                                   

consensus_14514#0      GCTCCGGCTCCGGCGGCATCCCCATCAAGGCTGATCAGGACTCGGATGGCTCGGCGCAGA 180
consensus_14514#1      -------------------------------------------GGATGGCTCGGCGCAGA 17
consensus_14514#2      ---------------------------GTGAGTAACTTTGTTCACATGGCGGGGCGATGC 33
                                                                    *****  ****  * 

consensus_14514#0      GCACTGC-TGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGAT-GCAAACCAGGTT 238
consensus_14514#1      GCACTGC-TGATATGACCGCTTTCGTGCAAAATCTTCTGATGCAGAT-GCAAACCAGGTT 75
consensus_14514#2      GAATTTCATGCAATCACTTCACTTTTACTGAATTGTAACTTTCTTGCAGCAAACCAGGTT 93
                       * * * * **  ** **  *  *  * *  ***  *    * *     ************

consensus_14514#0      CCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGA 298
consensus_14514#1      CCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGA 135
consensus_14514#2      CCAATCTATGTCAGAGAACATCATTTCAAAGATAGATGAAATGGGCGCAAGAATTGATGA 153
                       ************************************************************

consensus_14514#0      GTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAAC 358
consensus_14514#1      GTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCACC 195
consensus_14514#2      GTTGGAGCAGAGCATCAATGACCTCAAGGTTGAGATGGGCACTGAAGGTATTACCCCAAC 213
                       ********************************************************** *

consensus_14514#0      TAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAA 418
consensus_14514#1      TAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAA 255
consensus_14514#2      TAAGCCAAAGGACGAAGAATCGAAGCCTGCGGGTAGCTCTGCCGAATGAAAGAAACAGAA 273
                       ************************************************************

consensus_14514#0      GCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCAT 478
consensus_14514#1      GCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCAT 315
consensus_14514#2      GCAGTTGAAATGGTAGCATGCCATTCCAGATTTGATTTCCGTATCGACATCTCCAGCCAT 333
                       ************************************************************

consensus_14514#0      TCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGAT 538
consensus_14514#1      TCATCACTGACAAATTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGAT 375
consensus_14514#2      TCATCACTGACAAACTACATGCTGTAAGATCTTAGCAGGGCACTTTTATGCATCTGAGAT 393
                       ************** *********************************************

consensus_14514#0      TTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTC 598
consensus_14514#1      TTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAAATTC 435
consensus_14514#2      TTGTGGTAGCAGTTGAGAATCTCTCTTATAGATGTTGTTGCATGTTTTACTGTGAACTTC 453
                       ******************************************************** ***

consensus_14514#0      TCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCA 658
consensus_14514#1      TCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAGATTCA 495
consensus_14514#2      TCTGTGGATATTGTACTGTACTGCGCAGAGCAATGATCATAATAGGTTTGTTTAAAAAAA 513
                       ****************************************************** *   *

consensus_14514#0      AAAAATTGCTTCTTCGTTTGCTGATCACCAGATGGATGGCGTGTTTTCCAGATGAAACCA 718
consensus_14514#1      AAAAAAAAAAAAAAAAAC-ACTG-TCATCCGTTACGTAGCGTATCGTTACAGCAA----- 548
consensus_14514#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------------- 542
                       *****                     *                                 

consensus_14514#0      TGGACTTTCTGTAGCTGGTTGCTACCTATGTCATTGATTGGTTCCTAATTTCCTAACTAA 778
consensus_14514#1      ------------------------------------------------------------
consensus_14514#2      ------------------------------------------------------------
                                                                                   

consensus_14514#0      AAAAAAAAAAAA 790
consensus_14514#1      ------------
consensus_14514#2      ------------