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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14518#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1208 fasta sequence
[TTAACATATCAATGTCAAGCATTACATCGAAGTGGTTTGGCGAAGGAGAGAAATATGTAAAAGCTGTTTTCTCATTAGCAAGTAAAATAGCTCCAAGCGTTATATTCATTGATGAGGTTGATAGTATGCTAGGAAGGAGAGAGAATCCAGGGGAGCATGAAGCGATGCGCAAGATG-AAAAACG-AATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC-TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT-GGAT-GAGGCTG-TCATTAGGA-GGTTCCCG-CG-CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC-TATGA-CCGATGG-ATA-TT-CAGG--AAG-TGACC-TGAA--GAATCT-ATGCGTGA-CCGCAGC-T-C-ATTA-CCCC--A-TTCGAGAAATCCTTGAG-AAGGAAAAGAA-GGAG-AAAAA--TGTGGC--AAAAGCAGAAGG-CA-GGCC-TGAG--CCTG-CATT-GTAT-GGTAG-TG-A-GGA-CATTCGTCCTCTG--ACC-TTAGAT-GATTT-CAAATCTG--CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA-TTCAGC-AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCCTACCTTCGTCCTCCATCGTGTAATTAAATTGTGTACTGAAA-CCAGTTCA-GGTTTATTTGTC-AGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGGACATGGGAATAAGAACATTGTCCTGTTGTCGACAGTATAATGATTCTGACTAGCCATGGGTTGTTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTATATATATCTTGAGCTGA]
[+] EMBL AK063910 [TTAACATATCAATGTCAAGCATTACATCGAAGTGGTTTGGCGAAGGAGAGAAATATGTAAAAGCTGTTTTCTCATTAGCAAGTAAAATAGCTCCAAGCGTTATATTCATTGATGAGGTTGATAGTATGCTAGGAAGGAGAGAGAATCCAGGGGAGCATGAAGCGATGCGCAAGATG AAAAACG AATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTAGGA GGTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCCTACCTTCGTCCTCCATCGTGTAATTAAATTGTGTACTGAAA CCAGTTCA GGTTTATTTGTC AGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGGACATGGGAATAAGAACATTGTCCTGTTGTCGACAGTATAATGATTCTGACTAGCCATGGGTTGTTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTATATATATCTTGAGCTGA]
[+] EMBL CA998353 [ TGCTAGGAAGGAGAGAGAATCCAGGGGAGCATGAAGCGATGCGCAAGATG AAAAACG AATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTACGA GGTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAGAA TGTGGC AAAAGCATAACG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCACGTTTGTGCAAGCGT ]
[-] EMBL CB678425 [ TAGGAAGGAGAGAGAATCCAGGGGAGCATGAAGCGATGCGCAAGATG AAAATCG AATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTAGGA GGTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATTT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCTTACCTTCGTCCTCCATAGTGTAATTAAATTGTGTACTGAAAGCCAGTTCATGGTTTA TTATCGAGCT ]
[+] EMBL AU097419 [ AGCATGAAGCGATGCGCAAGATG AAAAACG AATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTAGGA GTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AA TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAA GNTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCC ]
[+] EMBL AU097386 [ GATGCGCAAGATGAAAAAACGAAATTTATGNTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTAGGA GTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGC ANAGNTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCC ]
[+] EMBL AU163614 [ TGTAC TGGTTCTTGGTGCCACAAATAGGCCTTTCGACCT GGAT GAGGCTG TCATTAGGA GTTCCCG CG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGC ANAGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCC ]
[+] EMBL BI806832 [ TGTACTTGGTTCTTGGTCCCACAAATA GCCTTTCGACCTGGGAT GA GCTGTTCATTAGGAGGGTTCCCG CGCCAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATA TGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTC ]
[+] EMBL BI810606 [ tGATGGAGCCT TCATTAGGA GTTCCCG CC CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATT GC AAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CC CAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCCAAACCAGTCGGGTTTTTTCCTCTTCTCCCT ]
[+] EMBL BI809487 [ CCCGCCG CAGGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGG CCGCAGC TCC ATTA CCCCCAATTTCGAGAAATCCTTGAG AAGGAAAAGAAGGGAG AAAAAATTGTGGCCAAAAAGCAGAAGGCCA GGCCTTGAGGCCCTGCCATTGGTATGGGTAGTTGAA GGACCATTCGTCCTCTGGAACCTTTAGATGGATTTCCAAATCTGGCCCCATGAGCAGGTTTGTTCAAGCGTTTCATCTGATTTCAGCAAAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTC ]
[-] EMBL CB619554 [ ATTCTGAAAGTAATATTGGCAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAG TGACC TGAA GAATCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCCTACCTTCGTCCTCCATCGTGTAATTAAATTGTGTACTGAAA CCAGTTCA GGTTTATTTGTC AGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGGACAGGGGAATAAGAACATTGTCCTGTTGTCGCCAG ]
[+] EMBL AU088628 [ TCCAGGTATTGATATGGATTCTCTTGCCAC TATGA CCGATGG ATA TT CAGG AAGTTGACC TGAA GAATCT AT NGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGNAAG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAA CGC CGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTC ]
[+] EMBL BI809151 [ tcCCACTTATGACCCGATGGAATAGTTCCAGGGAAAG TGACCTTGAAAGGAATCTAATGCGTGACCCCCAGCTT CAATTACCCCC A TTCGAGAAATCCTTGAGAAAGGAAAAGAA GGAGAAAAAA TGTGGC AAA CAGAAGG CACGGCC TGAG CCTG CATT GTAT GGTAG TG AGGGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGA CAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCC AAACCAGTCGGGTTTTTTCCTCTTCTCCCTTC ]
[+] EMBL CF282444 [ TCT ATGCGTGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAGNTG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCCTACCTTCGTCCTCCATCGTGTAATTAAATTGTGTACTGAAA CCAGTTCA GGTTTATTTGTC AGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGG ]
[+] EMBL AU031974 [ TGA CCGCAGC T C ATTA CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GNA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGC ANAGNTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCC ]
[-] EMBL AU070968 [ CCCC A TTCGAGAAATCCTTGAG AAGGAAAAGAA GGAG AAAAA TGTGGC AAAAGCAGAAGG CA GGCC TGAG CCTG CATT GTAT GGTAG TG A GGA CATTCGTCCTCTG ACC TTAGAT GATTT CAAATCTG CCCATGAGCAGGTTTGTGCAAGCGTTTCATCTGA TTCAGC AAACATGAATGAACTTCTTCAATGGAACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAGAGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGTCGCTATACCACCCCTCTTGGTCANAG NTCGCGACTTGGCCGGCCAAAACCAGTCGGGTTTTTTCCTCTTCTCCCTTCAGGA ]
[+] EMBL CF322987 [ TCCATCGTGTAATTAAATTGTGTACTGAAA CCAGTTCA GGTTTATTTGTC AGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGGACATGGGAATAAGAACATTGTCCTGTTGTCGACAGTATAAaaaaaa ]
consensusID : consensus_14518#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 332 fasta sequence
[TGTAATTAAATTTTGTACTGAAACCAGTTCAAGTTTCCTTGTCAGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTTACTTGTTGAAATCAAAGGACATGGGAATAAGAACATTGTTCCGTTTGTCGACAGTATAATGATTCTGACTAGCCATGGGTTGTTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF305978 [TGTAATTAAATTTTGTACTGAAACCAGTTCAAGTTTCCTTGTCAGCTGTTTGTTGCTCGAGTTAACTTGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATCCTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTTACTTGTTGAAATCAAAGGACATGGGAATAAGAACATTGTTCCGTTTGTCGACAGTATAATGATTCTGACTAGCCATGGGTTGTTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14518#0 TTAACATATCAATGTCAAGCATTACATCGAAGTGGTTTGGCGAAGGAGAGAAATATGTAA 60
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 AAGCTGTTTTCTCATTAGCAAGTAAAATAGCTCCAAGCGTTATATTCATTGATGAGGTTG 120
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 ATAGTATGCTAGGAAGGAGAGAGAATCCAGGGGAGCATGAAGCGATGCGCAAGATGAAAA 180
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 ACGAATTTATGGTGAATTGGGATGGATTACGCACTAAAGATAAAGAACGTGTACTGGTTC 240
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 TTGGTGCCACAAATAGGCCTTTCGACCTGGATGAGGCTGTCATTAGGAGGTTCCCGCGCA 300
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 GGTTAATGGTTAACTTACCTGACGCATCGAATAGAGAAAAGATTCTGAAAGTAATATTGG 360
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 CAAAGGAAGAGTTGGCTCCAGGTATTGATATGGATTCTCTTGCCACTATGACCGATGGAT 420
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 ATTCAGGAAGTGACCTGAAGAATCTATGCGTGACCGCAGCTCATTACCCCATTCGAGAAA 480
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 TCCTTGAGAAGGAAAAGAAGGAGAAAAATGTGGCAAAAGCAGAAGGCAGGCCTGAGCCTG 540
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 CATTGTATGGTAGTGAGGACATTCGTCCTCTGACCTTAGATGATTTCAAATCTGCCCATG 600
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 AGCAGGTTTGTGCAAGCGTTTCATCTGATTCAGCAAACATGAATGAACTTCTTCAATGGA 660
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 ACGACCTATATGGCGAGGGCGGTTCGAGGAAGAAGAAAGCACTGAGCTACTTCATGTGAG 720
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 AGCGATTCCATCATAACATGTGAGAGAGATTAAGACCCTGCCATATTGATATTGTACAGT 780
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 CGCTATACCACCCCTCTTGGCAAGCGCTTCGCGACTTGGCCGGCCAAAACCAGTCGGGTT 840
consensus_14518#1 ------------------------------------------------------------
consensus_14518#0 TTTTCCTCTTCTCCCTTCAGGAGCAGCGGCCGCCCTACCTTCGTCCTCCATCGTGTAATT 900
consensus_14518#1 -----------------------------------------------------TGTAATT 7
*******
consensus_14518#0 AAATTGTGTACTGAAACCAGTTCAGGTTTATTTGTCAGCTGTTTGTTGCTCGAGTTAACT 960
consensus_14518#1 AAATTTTGTACTGAAACCAGTTCAAGTTTCCTTGTCAGCTGTTTGTTGCTCGAGTTAACT 67
***** ****************** **** *****************************
consensus_14518#0 TGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATC 1020
consensus_14518#1 TGTAATGTTATCATTGCCTTACCCCAATGCCACCTCTTTTTTTCCCCCCTCTTCTGCATC 127
************************************************************
consensus_14518#0 CTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCTGTACATGTTGAAATCAAAGGACAT 1080
consensus_14518#1 CTTGGCTGTAGTAGCATATAGTCCTTGTGTACCTCT-TACTTGTTGAAATCAAAGGACAT 186
************************************ *** *******************
consensus_14518#0 GGGAATAAGAACATTGTCCTGTT-GTCGACAGTATAATGATTCTGACTAGCCATGGGTTG 1139
consensus_14518#1 GGGAATAAGAACATTGTTCCGTTTGTCGACAGTATAATGATTCTGACTAGCCATGGGTTG 246
***************** * *** ************************************
consensus_14518#0 TTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTATATATATC 1199
consensus_14518#1 TTGACATTATAAGGAGGAACTAAGACGTCTTTGCGTCTTAATTTTTTTTCTAAAAAAAAA 306
**************************************************** * * *
consensus_14518#0 TTGAGCTGA----------------- 1208
consensus_14518#1 AAAAAAAAAAAAAAAAAAAAAAAAAA 332
* *
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||