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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14560#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2129 fasta sequence
[TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA-GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC-GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTCTAAAAAAAGGAAAAAGA]
[+] EMBL CF276833 [TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGTTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACA ]
[+] EMBL CF276565 [ TGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTCATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGTTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTNTACCTGCAACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTG ]
[+] EMBL AK067523 [ ATTCACTTATACACGGAGTTTAATTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACACTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAAT ]
[+] EMBL CB649304 [ GAGTTTACTTATGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAA ]
[+] EMBL CB637188 [ TTA GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCT ]
[+] EMBL CB661676 [ TCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTT ]
[+] EMBL CB652273 [ CATACCTATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGACCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGA ]
[-] EMBL CB652274 [ GGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTAGGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAAGGATATATAATAATATAATATC ]
[-] EMBL CB661677 [ GGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCG ]
[-] EMBL CB677439 [ CTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATGCCAGTGATATATAATAATATAATATCGTTGTCTAAAAAAAGGA ]
[-] EMBL CB649305 [ GCTACGCTGCAGGACTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTATAGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTCTAGTACTAAAAAAAAGA]
[+] EMBL CF325686 [ ACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGTGCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAGGCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGG ]
[-] EMBL CF276566 [ CCGGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCAaaaaa ]
[-] EMBL CF280750 [ GGAGTCGTACCCGTACGCTGTGTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAAAGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACCNGACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGTTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTAAAAAAAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATA ]
[-] EMBL CF276834 [ CC GACACGTCGGACTGGAACCCAGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTTCATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATATAGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTGCTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTCGAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTTCGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAATAATATAATATCGTTGTC ]
consensusID : consensus_14560#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 806 fasta sequence
[ACTTATACACGGAGTTTAATTAGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGG]
[+] EMBL CB677438 [ACTTATACACGGAGTTTAATTAGTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTGCGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTAACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTAGATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGGCTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGG]
consensusID : consensus_14560#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence
[CATGCACTGAAGGAGTAGAAATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC]
[+] EMBL CF280749 [CATGCACTGAAGGAGTAGAAATCAGTTTCACCTATGGCTGAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGAACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGTTGGCCACTACGAACTCCAAGTTCCTGCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14560#0 TGGACTGAAGGAGTAGAAAATCCTTCGTAGTGCAATTCACTTATACACGGAGTTTAATTA 60
consensus_14560#1 --------------------------------------ACTTATACACGGAGTTTAATTA 22
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTG 120
consensus_14560#1 GTTTATTGCCTTCTACAATGGATAGGATCTTCGCCCGTTTCTTTTGCTTCCTACTGATTG 82
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTA 180
consensus_14560#1 CGGCAGTAAGCCATGCAGCTGATCTGTCCCCCGAGCAATACTGGCGATCCATCCTCCCTA 142
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 ACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTA 240
consensus_14560#1 ACACCCCAATGCCAAGCTCCATCTCCCAACTTCTTAACTACCCTTACTTGCCTGCTGTTA 202
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGG 300
consensus_14560#1 GATTACCTCGCCGTACGGATGCTGGTCAGCGCAACTACAAATCATCAGTTTCACATGTGG 262
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTG 360
consensus_14560#1 CTGAACGATCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTG 322
consensus_14560#2 --------------------------CATGCACTGAAGGAGTAGAAATCAGTTTCACCTA 34
** ** * ** ***** ** ****
consensus_14560#0 CCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTT 420
consensus_14560#1 CCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGTCATCAGTTT 382
consensus_14560#2 TGGCT---GAACTACCTCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTT 91
** *************** * **** ******************** ********
consensus_14560#0 CACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAG 480
consensus_14560#1 CACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCAACGCAACTACAAGTTATCAG 442
consensus_14560#2 CACCTGCTGCTGAACTACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAG 151
****** ***************************** ******** *************
consensus_14560#0 CTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTACAAGT 540
consensus_14560#1 CTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACGCAACTA----- 497
consensus_14560#2 TTTTACCTGCCACT---GAACTAGTTCACTATACAGATG---GTCAACGCAATTA----- 200
************* ****** **** *** **** ********** **
consensus_14560#0 CATCAGTTTCACCTATGGCTGAACTATCTCACCGTGTAGATGATGGTCAACGCAACTACA 600
consensus_14560#1 ----------------------------------------------------------CA 499
consensus_14560#2 ----------------------------------------------------------CA 202
**
consensus_14560#0 AGTTATCAGCTTT--ACCTGCCACTAATGAACTACCTCACCATACGGATGCTGGTCAACG 658
consensus_14560#1 AGTTATCAGCTTT--ACCTGCCACTAATGAACTACCTCACCGTACGGATGCTGGTCAACG 557
consensus_14560#2 AGTCATCAGTTTTGGAGACGCCAGAACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCC 262
*** ***** *** * **** * * * * * ** * *** ** *
consensus_14560#0 CAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGTCA 718
consensus_14560#1 CAACTACAAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGTAGATGATGGCCA 617
consensus_14560#2 TTGAGAAGAATCTTCAACAAGGTAAAAAAATTAATAACGCCCTCCACTTCGCCATCTTGT 322
* * ** *** * ** ** * * * **
consensus_14560#0 ACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTACGGATGC 778
consensus_14560#1 ACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCACCGTATAGATGC 677
consensus_14560#2 TGGCCACTACGAACTCCAAGTT---CCTGCCACGAGGCAAGGCGGACTCCATCCCGTT-C 378
** ***** * * ** * ******** * ** * ** * * * *
consensus_14560#0 TGGTCAACGCAACTAC---AAGTCATCAGTTTCACCTGTGGCTGAACTACCTCACCGTGT 835
consensus_14560#1 TGGTCAACGCAACTAC---AAGTCATCAGTTTCACCTATGGCTGAACTACCTCACCGTGC 734
consensus_14560#2 TCCTCTAAAGAACTACCCGAGATCCTNGGACCGGTTCGGGGGTG--CGGCCGGGCTCCGA 436
* ** * ****** * ** * * ** ** * ** * *
consensus_14560#0 AGATGATGGCCAACGCAACTACAAGTTATCAGCTTTACCTGCCACTAATGAACTACCTCA 895
consensus_14560#1 AGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCT---GAACTACCTCA 791
consensus_14560#2 CGACG-CGGCTGAGATGAGTGCTACGCTGCAGGACTGCGAGCTGCCGGC----------- 484
** * ** * * * * * *** * ** *
consensus_14560#0 CCGTATAGATGCTGGTCAACGCAACTACAAGTCATCAGTTTCACCTATGGCTGAACTACC 955
consensus_14560#1 CCGTGTAGATGATGG--------------------------------------------- 806
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 TCACCGTGCAGATGATGGTCAACGCAACTACAAGTTATCAGTTTCACCTGCTGCTGAACT 1015
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 ACCTCACCGTGTAGATGATGGTCAACGCAATTACAAGTTATCAGTTTTACCTGCCACTGA 1075
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 ACTAGTTCACTATACAGATGGTCAACGCAATTACAAGTCATCAGTTTTGGAGACGCCAGA 1135
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 ACTTCTCAAAGACCCCGACATGGCGCTCTTCTTCCTTGAGAAGAATCTTCAACAAGGTAA 1195
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AAAAATTAATAACGCCCTCCACTTCGCCAACTTGTTGGCCACTACGAACTCCAAGTTCCT 1255
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GCCACGAGGCAAGGCGGACTCCATCCCGTTCTCCTCTAAAGAACTACCCGAGATCCTGGA 1315
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CCGGTTCGGGGTGCGGCCGGGCTCCGACGACGCGGCTGAGATGAGTGCTACGCTGCAGGA 1375
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CTGCGAGCTGCCGGCGAATAAGGGAGAGAAGAAGGCCTGCGCCACGTCGCTGGAGTCTAT 1435
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AGTCGACTTCGTCACATCCAGCTTTGGGGCCAGTGACGTCGACGCCGCCTCCACCGTTGT 1495
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GCTCAGTAAGGCGGTGGAGTCTTCTTCGCTGGCGCAGGACTACACGGTGAGCGGCGTGAG 1555
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GCGAATGGCCGGAACCGGCCAGCTCATCGCTTGCCATCCGGAGTCGTACCCGTACGCTGT 1615
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GTTCATGTGCCACCTCACAGAGGCGACGACGAGGGCGTACAAGGCCTCATTGGTCGGCAA 1675
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AGATGGTACTGCGGTGGAGGCGGTCGCCGTGTGCCACACCGACACGTCGGACTGGAACCC 1735
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AGAGCACGCTGCCTTCCATGTGCTCGGCGTCAAGCCTGGGACTGTGCCTGTCTGCCACTT 1795
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CATGCAGCCTGACGCTGTCGTCTGGACCCGCAGGGGCTGATGTATGTATGTATGCCATAT 1855
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AGTACCTACTTCATCGTACTGTACTGCGTACGCATGCTGCCAGCTGCTTTGCATACCTTG 1915
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CTGCTGGAGATATATAATTAATATCCAGCACTTATATACTCGTCACTTCTATCGTGTGTC 1975
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 GAAGGTTATATACTTGTAGCATTTGGGGATGCAGTACGTACGTGTGTCTGTAATAAGTTT 2035
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 CGTGATATGTTGCTTCATCCATATGGACCATATGTACCACCAATCCCAGTGATATATAAT 2095
consensus_14560#1 ------------------------------------------------------------
consensus_14560#2 ------------------------------------------------------------
consensus_14560#0 AATATAATATCGTTGTCTAAAAAAAGGAAAAAGA 2129
consensus_14560#1 ----------------------------------
consensus_14560#2 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||