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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14568#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 987 fasta sequence
[GAGTAGAAAAAGCAGATCATCACCTCTCCACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC-TGCGGGATCCTCT-ACAGCGGGTG-CCCCGGCG-AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC-GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC-GCGACGAC-GGCCAATAGCTAGCCACCACG-TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF291861 [GAGTAGAAAAAGCAGATCATCACCTCTCCACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGC ]
[+] EMBL AK071135 [ ATCATCACCTCTCCACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGG ]
[+] EMBL CF334711 [ ACCTCTCCACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTG ]
[+] EMBL CB684648 [ CCACCCTTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGC ]
[+] EMBL OSA238117 [ ACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTTGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGG ]
[+] EMBL OSS13276A [ ACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGGGNTCGACGGCTNCTGCATGGTGC ]
[+] EMBL OSS12618A [ ACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGNGAGGCGAGCNAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGNACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTACTTGCGGGATCCTCT ACAGCGGGTG CCCCGGCGAAGAGGCCATGCGACGGGNTCGA ]
[+] EMBL OSS13381A [ ACCCGTTTCTTTCTCGGCCCATCCAACACGCGCTCTTGCTTGAACGCGCAAAGAGAAACACGACGGGCGAGGCGAGCGAGATGAGGTTCTTCCTCAAGCTCGCTCCTCGGTGTTCCGTGCTGCTTCTCCTCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACG ]
[+] EMBL C27540 [ TCTTGCTGGTGACGGCGTCGCGGGGGCTTAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTCGGGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTNTTCGCCGGCAAGATCCTCCACAAGCGGCGACGACGGGCCAATAGCTAGCCACCACGTTTTCGCACA ]
[-] EMBL CB684649 [ TAACATCGGCGACCTGCTTGGCAGCACGCCGGCGAAGGACCAGGGATGTAGCCGGACGTGCGAATCCCAGTTTTGCACAATTGCACCTCTGCTGAGGTACGGCAAGTAC TGCGGGATCCTCT ACAGCGGGTG CCCCGGCG AGAGGCCATGCGACGCGCTCGACGCCTGCTGCATGGTGCACGACCACTGCGTCGACACCCACAACGACGACTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGGAATTATTAAATGGAACATGGTTGGTTATTGG ]
[+] EMBL AU096298 [ AGGTACGCCAA TACTTGCGGGATCCTCTAACAGCGGGTGCCCCCGGCGAAGAGGCCATNCGACGCGNTCGACGCCTGCTGCATGGTNCACGACCCATGCGTCGACACCCACAACGACGANTACCTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAAAAAAAA ]
[-] EMBL CF334712 [ CGACGACTACTTGAACACGATGTGCAACGAGAACCTGCTGAGCTGCATCGACCGGGTGAGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCGGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTAC AAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAGACAAAA ]
[-] EMBL CF291862 [ AGCGGGGCGACGTTCCCGGGGAACAAGTGCAACGTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTAC AAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAA ]
[+] EMBL AU197939 [ GTC GGCCAGACGGCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAAGATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTNGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTNGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAAAAAAAA ]
[+] EMBL AU101749 [ nCGTCCGTCATCAGGGGGGTCATCGAGACGGCCGTGTTCGCCGGCAANATCCTCCACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACAAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGCGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGCATGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAAAAAAAA ]
[+] EMBL AU160890 [ CACAAGC GCGACGAC GGCCAATAGCTAGCCACCACG TTTCGCACATACACACGCTGTACAGTGAATCAGTGATAGTACNAAGAAGCCTAGAGGTAATAAAACCGCGCGGCGGNGTCCACCGGTGGCCGTGGCGTGGCGGTGCGGCAACCAGAACGCGGNNTGCGCGCGCTTGCTGGCAGCTGGACCACCTGTGGTTCGTAGGCGTAGGCATTGGACCTCGGTTGTTGGTGCGGCAATGGCGTTGGCCACTGGCGACGGGGAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAA ]
[+] EMBL CF291353 [ ctgaAGGAGTAACATTATGCTCTGTTAGTCAATAAGACGGAACATGTTACAAAAAAAAAAAAGAAATTATTAAATGGAACATGGTTGGTTATTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||