cluster # 14574

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Oryza sativa
cluster # 14574 cluster # 14574 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14574#0 length = 700 sequences # 1

consensus_14574#1 length = 694 sequences # 15
consensus_14574#2 length = 268 sequences # 1

consensusID : consensus_14574#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence

                              [TTGNCCCCCNNTTAATTCCGCCCCCCTTTTNGGGCCGNATTGGGTTTNCCGGGCCCCCCCCCCTCGGGTTCGNCCCCCANGCTTCCGGCCCNTTCACCAGCAGCTTCAACGTTTCCNNCGATNCGGCAACCANGCCNTNTCCCACCCATGCCCCNTTTTGGCTCCAGGGNACCGCCTTTNCCAGGGGGGGCCCCTNCTCACTTNCNTCCACCTCCCCTGCCGCCCNTCCTGAGGCTGGTGATCCAGAAGGCCTCTACTNCCAAGGTTTCCTGAAAGAANCCANGGNAAAACAANGAAAAGANCGACCAANNNAGGCTAGACCGACTACTACCAAGAGGATTTACAGGGATTACTTTGGTCTGAATCCGAGGGCCCCTGCCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTAAAAAA]

[+] EMBL AU032798             [TTGNCCCCCNNTTAATTCCGCCCCCCTTTTNGGGCCGNATTGGGTTTNCCGGGCCCCCCCCCCTCGGGTTCGNCCCCCANGCTTCCGGCCCNTTCACCAGCAGCTTCAACGTTTCCNNCGATNCGGCAACCANGCCNTNTCCCACCCATGCCCCNTTTTGGCTCCAGGGNACCGCCTTTNCCAGGGGGGGCCCCTNCTCACTTNCNTCCACCTCCCCTGCCGCCCNTCCTGAGGCTGGTGATCCAGAAGGCCTCTACTNCCAAGGTTTCCTGAAAGAANCCANGGNAAAACAANGAAAAGANCGACCAANNNAGGCTAGACCGACTACTACCAAGAGGATTTACAGGGATTACTTTGGTCTGAATCCGAGGGCCCCTGCCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTAAAAAA]




>consensus_14574#0
TTGNCCCCCNNTTAATTCCGCCCCCCTTTTNGGGCCGNATTGGGTTTNCCGGGCCCCCCC
CCCTCGGGTTCGNCCCCCANGCTTCCGGCCCNTTCACCAGCAGCTTCAACGTTTCCNNCG
ATNCGGCAACCANGCCNTNTCCCACCCATGCCCCNTTTTGGCTCCAGGGNACCGCCTTTN
CCAGGGGGGGCCCCTNCTCACTTNCNTCCACCTCCCCTGCCGCCCNTCCTGAGGCTGGTG
ATCCAGAAGGCCTCTACTNCCAAGGTTTCCTGAAAGAANCCANGGNAAAACAANGAAAAG
ANCGACCAANNNAGGCTAGACCGACTACTACCAAGAGGATTTACAGGGATTACTTTGGTC
TGAATCCGAGGGCCCCTGCCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAA
GGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCC
TAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTAT
CTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGT
TGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAAT
AGTTCACAATCAGAGAGGCGAAGACAGATATTTTAAAAAA

consensusID : consensus_14574#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 694
fasta sequence

                              [TCATGCGGGAAGCGACTAGGAATTGGGAGTAAACAAAGATCACTCCAACTACCATGGCTCAGCCCCAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC-TGCAAGA-GTA-TC-TGAAGAAATCAAAGGAAAA-CAAA-GAAAAGAA-CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT-GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTATATGTAGCA]

[+] EMBL CF335120             [TCATGCGGGAAGCGACTAGGAATTGGGAGTAAACAAAGATCACTCCAACTACCATGGCTCAGCCCCAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTAGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGC                                                                                                                                                                           ]
[+] EMBL C99049               [                                              AACTACCATGGCTCAGCCCCAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTA                                                                                                                                                                                                          ]
[+] EMBL CF302282             [                                                         gagtagaaaAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAAaa                                                ]
[+] EMBL CA764703             [                                                                         ACTGGTGGACACAATC GGAGGCCCTTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAAAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATAT             ]
[+] EMBL CB096634             [                                                                         ACTGGTGGACACAATC GGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATC                                                      ]
[+] EMBL AK070777             [                                                                           TGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAGGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAA                                                           ]
[+] EMBL AU096868             [                                                                                             GGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAG                                                                                                                                                                                                                                                        ]
[+] EMBL OSS15519A            [                                                                                             GGCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGGAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGANGCATGCTTTCTTGAAGGGCATCCCTTGTA                                                                                                                                ]
[+] EMBL AU096869             [                                                                                              GCCATTCACAGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAA                                                                  ]
[+] EMBL CB684548             [                                                                                                 ATTCACCTCAACTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCACAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS14176A            [                                                                                                       AGCAGCTTCAACGTTTCATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTTACAAGACCAAATAGTCAGAAGCTCAGG TTATATGCATGCCTAAAATCT GG AGGGTTTCTTACAGTTATTGCTTTAGGTA                                                                                                                                                                                        ]
[-] EMBL CF335121             [                                                                                                                        ATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTAGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAaaaaaaaaa                       ]
[+] EMBL CB679397             [                                                                                                                      ttccctATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTAGCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTATATGTAGCA]
[+] EMBL AU198067             [                                                                                                                                                                                                TTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAATCAAGAAAGGCTCTAC TGCAAGA GTA TC TGAAGAAATCAAAGGAAAA CAAA GAAAAGAA CGCCAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCGAGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAA                                                                  ]
[+] EMBL C99050               [                                                                                                                                                                                                                                                            TACTTCCAAGAGGTATTCTTGAGGAANTCAAGGGAAAACCAAAGGAAAAGAACCGACAAAGAGAGGCTAGACGACTACTACAAGGGGAATTACAGGGATTACTTTGGTCTGATCGAGGNCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCT GGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTAaaaaa    ]




>consensus_14574#1
TCATGCGGGAAGCGACTAGGAATTGGGAGTAAACAAAGATCACTCCAACTACCATGGCTC
AGCCCCAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCACAGCAGCTTCAACGTTTC
ATCGATCAGCAACAAGGCATCTCCAGCCACTGGCCATGTTGGCTCAGAGGAACGGCATTA
GCAGGAGGGGCCTTCTCACTTTCCTCACCTCCACTGCAGCCATACCTGAGGCTGGTGAAT
CAAGAAAGGCTCTACTGCAAGAGTATCTGAAGAAATCAAAGGAAAACAAAGAAAAGAACG
ACAAAGAGAGGCTAGACGACTACTACAAGAGGAATTACAGGGATTACTTTGGTCTGATCG
AGGGCCCTGCAAGACAGAAGAATGAAGATGAGCTTACAGAGTCGGAGAAAGGAATTCTCG
AATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGG
AAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCA
TGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACA
AGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAACATAATAGTTCACAAT
CAGAGAGGCGAAGACAGATATTTTATATGTAGCA

consensusID : consensus_14574#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 268
fasta sequence

                              [GAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF310365             [GAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATATGCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14574#2
GAGTCGGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGAT
AATATGCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCT
TGTGCTGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTC
TGGCAGTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGA
TCTCAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14574#1      TCATGCGGGAAGCGACTAGGAATTGGGAGTAAACAAAGATCACTCCAACTACCATGGCTC 60
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      -----TTGNCCCCCNNTTAATTCCGCCCCCCTTTTNGGGCCGNATTGGGTTTNCCGGGCC 55
                                                                                   

consensus_14574#1      AGCCCCAAGGGAAACTGGTGGACACAATCAGGAGGCCATTCAC-AGCAGCTTCAACGTTT 119
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      CCCCCCCCTCGGGTTCGNCCCCCANGCTTCCG-GCCCNTTCACCAGCAGCTTCAACGTTT 114
                                                                                   

consensus_14574#1      C-ATCGATC-AGCAACAAGGCATCT--CCAGCCACTGGCCATGTTGGCTC-AGAGGAACG 174
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      CCNNCGATNCGGCAACCANGCCNTNTCCCACCCATGCCCCNTTTTGGCTCCAGGGNACCG 174
                                                                                   

consensus_14574#1      GCATTAGCAGGAGGGGCC--TTCTCACTTTCCTC-ACCTCCACTGCAGCCATACCTGAGG 231
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      CCTTTNCCAGGGGGGGCCCCTNCTCACTTNCNTCCACCTCCCCTGCCGCCCNTCCTGAGG 234
                                                                                   

consensus_14574#1      CTGGTGAATCAAGAAAGGCTCTACTGCAAGAGTATCT--GAAGAAATCAAAGGAAAACAA 289
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      CTGGTGA-TCCAGAAGGCCTCTACTNCCAAGGTTTCCTGAAAGAANCCANGGNAAAACAA 293
                                                                                   

consensus_14574#1      AGAAAAGAACGACAAAGAGAGGCTAGAC-GACTACTAC-AAGAGGAATTACAGGGATTAC 347
consensus_14574#2      ------------------------------------------------------------
consensus_14574#0      NGAAAAGANCGACCAANNNAGGCTAGACCGACTACTACCAAGAGGATTTACAGGGATTAC 353
                                                                                   

consensus_14574#1      TTTGGTCTGA--TCGAGGGCCCTG--CAAGACAGAAGAATGAAGATGAGCTTACAGAGTC 403
consensus_14574#2      -------------------------------------------------------GAGTC 5
consensus_14574#0      TTTGGTCTGAATCCGAGGGCCCCTGCCAAGACAGAAGAATGAAGATGAGCTTACAGAGTC 413
                                                                              *****

consensus_14574#1      GGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATAT 463
consensus_14574#2      GGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATAT 65
consensus_14574#0      GGAGAAAGGAATTCTCGAATGGCTTGACAAGAACAAATAGTCAGAAGCTCAGGATAATAT 473
                       ************************************************************

consensus_14574#1      GCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGC 523
consensus_14574#2      GCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGC 125
consensus_14574#0      GCATGCCTAAATTCTGGAAGGTTTTCTTACAGTTATTGCTTTAGTTATGCAGTCTTGTGC 533
                       ************************************************************

consensus_14574#1      TGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCA 583
consensus_14574#2      TGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCA 185
consensus_14574#0      TGCTTATCTGAGAGGCATGCTTTCTTGAAGGTCATCCTTTGTAGTGCCGGTACTCTGGCA 593
                       ************************************************************

consensus_14574#1      GTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCA 643
consensus_14574#2      GTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCA 245
consensus_14574#0      GTAATGTTGTAATTACAAGTGTGTTCATAGACAAAGTATAAAAAATGCTGAACGATCTCA 653
                       ************************************************************

consensus_14574#1      ACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTATATGTAGCA 694
consensus_14574#2      AAAAAAAAAAAAAAAAAAAAAAA---------------------------- 268
consensus_14574#0      ACATAATAGTTCACAATCAGAGAGGCGAAGACAGATATTTTAAAAAA---- 700
                       * * ** *    * **  * * *