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Oryza sativa
cluster # 14579 cluster # 14579       Sequences # 17       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14579#0 length = 1967 sequences # 14  
consensus_14579#1 length = 1140 sequences # 2  
consensus_14579#2 length = 648 sequences # 1  

consensusID : consensus_14579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1967
fasta sequence
                              [TCCGCCTCCACTTAGCTTGAGACCGCTTTATTCCTCGCTCAGGGAGGAGGAGGAGAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATT-GT-GTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT-GGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGC-TTGCAGAAAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAATATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCTCTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAGTGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAAATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTG-CCTAGGCTGAAG-ACAGCTGCTGTTTCA-G-TAATG-AGTGAGATGGGTATGAACGGGGCACCTTTGTCTGA-AGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCA-CCAAA-CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA-CCCCTTGAAACAGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK111534             [TCCGCCTCCACTTAGCTTGAGACCGCTTTATTCCTCGCTCAGGGAGGAGGAGGAGAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATT GT GTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT GGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGC TTGCAGAAAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAATATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCTCTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAGTGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAAATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTG CCTAGGCTGAAG ACAGCTGCTGTTTCA G TAATG AGTGAGATGGGTATGAACGGGGCACCTTTGTCTGA AGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA CCCCTTGAAACAGT                                              ]
[+] EMBL CB655439             [                                      TCAGCCATGAGGAGGAGAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATT GT GTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT GGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB677904             [                                                    GAGAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATT GT GTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT GGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACAAGCACACTCCCTACATTGTTATCCTTGTGAGGCTTTGCAG AAAATGGGCAGATGCACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB677867             [                                                    GACAATGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAGGACCAAGTACGATCGCCAGCTCATGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTATGGAGTGTTACTGTTGGTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCATAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCATGAAAGCTAATATT GT GTTGGGTGCTGCACGTTCATATGGTCTAACTGGGCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT GGGTTGAACTCAAGCAATTTGCAGAGTCAATTGATATAAATGATAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF306486             [                                                      GAAGGCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGC AATATT GTNGTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGGGTTGAACTCAAGCAATTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF326150             [                                                          GCGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATTGGT GTTGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGGGTTGAACTCAAGCAATTTGCAAAGTCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB677866             [                                                    gagcctgtGAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGGAGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCAAGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGAAGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTGTGCTTGGAGGAGTAGGGAGTGTTACTGTTGGTGATGGTTCCAAAGTTGAACAATCTGACATGGGAAACAATTTCCTGTTGGATGCACAATGCTTGGGGCAATCAAGAGCAAAATCTGTATGTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTCTGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTCAGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATT GT GTTGGGTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACAATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCAT GGGTTGAACTCAAGCAATTTGCAAAGTCAATTGATATGAATGATAAAGATCCTGTTGTGCACAAGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB677905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTG CCTAGGCTGAAG ACAGCTGCTGTTTCA G TAATG AGTGAGATGGGTATGAACGGGGCACCTTTGTCTGA AGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA CCCC TGAAAC                                                 ]
[-] EMBL CB677868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTG CCTAGGCTGAAG ACAGCTGCTGTTTCA G TAATG AGTGAGATGGGTATGAACGGGGCACCTTTGTCTGA AGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATGGACATGGGAAAAGGTCAAAATA CCCC TGAAA                                                  ]
[+] EMBL BI812823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGCCCTAGGCTGAAGAACACTTGCTGTTTCACGTTAATGAAGTGAGATGGGTATGAACCGGGCACCCTTGTCTGAGAGACCTGATTACTGAAATGTGCCGGTTTGGGGGT CAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCCAGAAGTAATTAAGCTGGTCACCCAAACCAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACCAATCTCAAGTTTTGGCGTTAT ACATCCATCTGGTATAGAGCTTTTCGGAACCTCACCCCATTAATTACCTTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCCATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACCTGGGAAAAGGTCCCAATACCCCCTTGAAAAA   AAAAA                                        ]
[+] EMBL CF330698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA CCCCTTGAAACAGTNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF315347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA CCCCTTGAAACAGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAA      ]
[+] EMBL CF313386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTAATTAAGCTGGTCA CCAAA CAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATA CCC                                                         ]
[+] EMBL CF299736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTATATTCAACGGGATTGATCACAAATGTCAAGTTTTGGCGTTATAACATGAATCTGGTATAGAGCTATGCGGAACCTCACCCATTTAATTACATTAGAGTTGCCCCATATTCTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGACAGATTTGGAATTATCATCGTATTAACATGGGAAAAGGTCTAAATA CCC                                                         ]


>consensus_14579#0 TCCGCCTCCACTTAGCTTGAGACCGCTTTATTCCTCGCTCAGGGAGGAGGAGGAGAAGGC GAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGG AGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCA AGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGA AGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTG TGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACA TGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTAT GTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTC TGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTC AGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATTGTGT TGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACA ATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGG TTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACA AGCACACTCCCTACATTGTTATCCTTGTGAGGCTTGCAGAAAAATGGGCAGATGCACATG ATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAAT ATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCT CTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAG TGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAA ATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTG AGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCT TGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCAC GGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCA GTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATG AAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAG CCAACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTGCCTAGGC TGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCTG AAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCT TCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTT TGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAAC ATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCA GATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTG TCAGATTTGGAATTATCATCGTATTTACATGGGAAAAGGTCAAAATACCCCTTGAAACAG TNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14579#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1140
fasta sequence
                              [CTCAAGCAATTTGCANAGNCAATTGATATAGNTGACANNNATNCTGNTGTGCACAGGCACACTCCCTACATTGTTATCCTTGCGAGGCTTGCAGANAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTNAAGGCACTGATTCGAGAACATATGCTTAATTTATGATGAAGAAAACTACAAAGAAGCAGTGGAGNCCTNGTATAAAGTCTCTGTTACTCCAGGGATCAGTGATGANATCCGTCAGATAATTGATGATAGNTCCGCTGAAGNGAATTCATCTTCTTCANATTTCTGGGTTTTAGTGGNTGCTTTGAAGGAATTTATTGCAAATGANGGCAACGGTGAGCTACCTNTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCA-TGT-AAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTC-TATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCANA-GTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAANACTACTGCTTTGCAATGAACTTCTATGNTCTGCTACGCGCTGGTGATCGACTTGCAGCCCAACTATAACAGATG-CCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGCTTCAGTAACGAGTGAAATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGGCTGCCTTGCATTGGCGGAGTGAGCATGCCCAAGAACGTGAATTGAAGCTGGGTGCAACCAAACACGTCTTGTGCCTGTTGCTGGGGAACATTGTGATGATTGCAACGGGGATTGATGCACAAATGCTGCAAGTTTNTGGCGTTGATGAACATGCAATGCTGGGTGATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGCGCATGAATAATCACTGGTCCATATAAAAAAAAAA]

[+] EMBL CA767263             [CTCAAGCAATTTGCANAGNCAATTGATATAGNTGACANNNATNCTGNTGTGCACAGGCACACTCCCTACATTGTTATCCTTGCGAGGCTTGCAGANAAATGGGCAGATGCACATGATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTNAAGGCACTGATTCGAGAACATATGCTTAATTTATGATGAAGAAAACTACAAAGAAGCAGTGGAGNCCTNGTATAAAGTCTCTGTTACTCCAGGGATCAGTGATGANATCCGTCAGATAATTGATGATAGNTCCGCTGAAGNGAATTCATCTTCTTCANATTTCTGGGTTTTAGTGGNTGCTTTGAAGGAATTTATTGCAAATGANGGCAACGGTGAGCTACCTNTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGAGCATCA TGT AAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTC TATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCANA GTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAANACTACTGCTTTGCAATGAACTTCTATGNTCTGCTACGCGCTGGTGATCGACTTGCAGCCCAACTATAACAGATG CCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGCTTCAGTAACGAGTGAAA                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BQ909250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCATTGTAAAAGGATATCTTGAA CGAATTGATAGAGACCCTGATTCGTATTTCACGGGCATACAT   NACATTTTGC CNAATGCTAGAAAACTCAGAGGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGCGCTGTTGATCGACTTGCAG CCAACTATAACAGATGCCCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGGCTGCCTTGCATTGGCGGAGTGAGCATGCCCAAGAACGTGAATTGAAGCTGGGTGCAACCAAACACGTCTTGTGCCTGTTGCTGGGGAACATTGTGATGATTGCAACGGGGATTGATGCACAAATGCTGCAAGTTTNTGGCGTTGATGAACATGCAATGCTGGGTGATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGCGCATGAATAATCACTGGTCCATATAAAAAAAAAA]


>consensus_14579#1 CTCAAGCAATTTGCANAGNCAATTGATATAGNTGACANNNATNCTGNTGTGCACAGGCAC ACTCCCTACATTGTTATCCTTGCGAGGCTTGCAGANAAATGGGCAGATGCACATGATGGG CGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTNAAGGCACTGATTCGAGAACATATG CTTAATTTATGATGAAGAAAACTACAAAGAAGCAGTGGAGNCCTNGTATAAAGTCTCTGT TACTCCAGGGATCAGTGATGANATCCGTCAGATAATTGATGATAGNTCCGCTGAAGNGAA TTCATCTTCTTCANATTTCTGGGTTTTAGTGGNTGCTTTGAAGGAATTTATTGCAAATGA NGGCAACGGTGAGCTACCTNTTGAGGGGACGATACCTGATATGACTTCACTTACTGAGTA CTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCTTGGA GCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCACGGGC ATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCANAGTCTGTAGGTACCGCAGTAT GGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATGAANA CTACTGCTTTGCAATGAACTTCTATGNTCTGCTACGCGCTGGTGATCGACTTGCAGCCCA ACTATAACAGATGCCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGCTTCAGTAACGA GTGAAATGGGTATGAACGGGGCACCTTTGTCTGAAGACCTGATTACTGAAATGTGCCGGT TTGGGGGTGCAGAGATTCATCCCGTGGGCTGCCTTGCATTGGCGGAGTGAGCATGCCCAA GAACGTGAATTGAAGCTGGGTGCAACCAAACACGTCTTGTGCCTGTTGCTGGGGAACATT GTGATGATTGCAACGGGGATTGATGCACAAATGCTGCAAGTTTNTGGCGTTGATGAACAT GCAATGCTGGGTGATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCC CAGATTTTGTATTATGGCCTTCCGGCGCATGAATAATCACTGGTCCATATAAAAAAAAAA



consensusID : consensus_14579#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence
                              [GACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTTTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGGGAAGGTCAAAATACCCCTG]

[-] EMBL CB655440             [GACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGGCTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTTTGAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATTGGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTTTGCTGGGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAATCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACATGGGGGAAGGTCAAAATACCCCTG]


>consensus_14579#2 GACCCTGATTCTATTTCACGGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTC AGAGTCTGTAGGTACCGCAGTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTT CAAATATACTTCACCGATGAAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGT GCTGTTGATCGACTTGCAGCCAACTATAACAGATGCCCTGGAATCTTTGAAAGGCTGAAG ACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTTTGAAGAC CTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGCTGCCTTCATT GGCGGAGTAGCATCCCAAGAAGTAATTAAGCTGGTCACCAAACAGTTTGTGCCTTTGCTG GGAACATTTATATTCAACGGGATTGATCACAAATCTCAAGTTTTGGCGTTATAACATCAA TCTGGTATAGAGCTTTTCGGAACCTCACCCAATTAATTACATTAGAGTTGCCCCAGATTT TGTATTATGGCCTTCCGGTGCAATGAAAATCACTTGTCCATATAAATGATCATTGTCAGA TTTGGAATTATCATCGTATTTACATGGGGGAAGGTCAAAATACCCCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14579#0      TCCGCCTCCACTTAGCTTGAGACCGCTTTATTCCTCGCTCAGGGAGGAGGAGGAGAAGGC 60
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      GAAGGCGAAGCAAAGCAAAACCTCGGAAGAGCGGCAGAGCCCACTCCACACGCGGAGAGG 120
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      AGACCACGCCGCCGCCGGAAGCCATGGCCGCCGCCACCGCCGCCGCCTTCGCGGAGCCCA 180
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      AGACCAAGTACGATCGCCAGCTCAGGATATGGGGTGATCAAGGACAGGCTGCACTGGAGA 240
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      AGGCTAGCATATGCTTGCTTACCTGTGGCCCTACAGGAACTGAAGCGATGAAGAACCTTG 300
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      TGCTTGGAGGAGTAGGGAGTGTTACTGTTGTTGATGGTTCCAAAGTTGAACAATCTGACA 360
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      TGGGAAACAATTTCCTGTTGGATGCAGAATGCTTGGGGCAATCAAGAGCAAAATCTGTAT 420
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      GTTCGTTCCTGCAAGAGCTGAATGATGCTGTAAATGCCAAGTTTGTCGAGGAGTCTCCTC 480
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      TGGCTCTCATAGACACAAACCCTTCATTCTTTTCCCAATTTACCGTAGTCATTGCTACTC 540
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      AGCTTCCAGAGAGATCTTTACTGAAACTAGATGATATCTGCAGGAAAGCAAATATTGTGT 600
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      TGGTTGCTGCACGTTCATATGGTCTAACTGGTCTAGTCAGGATCAGCGTTAAGGAGCACA 660
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      ATGTTATAGAATCAAAACCGGACCACTTCCTGGATGATTTACGCCTTCACAATCCATGGG 720
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      TTGAACTCAAGCAATTTGCAAAGTCAATTGATATAAATGATAAAGATCCTGTTGTGCACA 780
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ----CTCAAGCAATTTGCANAGNCAATTGATATAGNTGACANNNATNCTGNTGTGCACAG 56
                                                                                   

consensus_14579#0      AGCACACTCCCTACATTGTTATCCTTGTGAGGCTTGCAGAAAAATGGGCAGATGCACATG 840
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      GCACACTCCCTACATTGTTATCCTTGCGAGGCTTGCAGANAAATGGGCAGATGCACATGA 116
                                                                                   

consensus_14579#0      ATGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTCAAGGCACTGATTCGAGAAT 900
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      TGGGCGCTTACCTTCGACTAGGCAAGAGAAAAATGAATTNAAGGCACTGATTCGAGAACA 176
                                                                                   

consensus_14579#0      ATATGCTTAATTTAGATGAAGAAAACTACAAAGAAGCAGTGGAGTCCTCGTATAAAGTCT 960
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      TATGCTTAATTTATGATGAAGAAAACTACAAAGAAGCAGTGGAGNCCTNGTATAAAGTCT 236
                                                                                   

consensus_14579#0      CTGTTACTCCAGGGATCAGTGATGAGATCCGTCAGATAATTGATGATAGCTCCGCTGAAG 1020
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      CTGTTACTCCAGGGATCAGTGATGANATCCGTCAGATAATTGATGATAGNTCCGCTGAAG 296
                                                                                   

consensus_14579#0      TGAATTCATCTTCTTCAGATTTCTGGGTTTTAGTGGCTGCTTTGAAGGAATTTATTGCAA 1080
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      NGAATTCATCTTCTTCANATTTCTGGGTTTTAGTGGNTGCTTTGAAGGAATTTATTGCAA 356
                                                                                   

consensus_14579#0      ATGAGGGCAACGGTGAGCTACCTCTTGAGGGGACGATACCTGATATGACTTCACTTACTG 1140
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      ATGANGGCAACGGTGAGCTACCTNTTGAGGGGACGATACCTGATATGACTTCACTTACTG 416
                                                                                   

consensus_14579#0      AGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCT 1200
consensus_14579#2      ------------------------------------------------------------
consensus_14579#1      AGTACTATGTTAGCCTGCAAAAGATTTACCAAGCTAAGGCTGAATCTGACTGCCTTGCCT 476
                                                                                   

consensus_14579#0      TGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCAC 1260
consensus_14579#2      -----------------------------------------GACCCTGATTCTATTTCAC 19
consensus_14579#1      TGGAGCATCATGTAAAGGATATCTTGAAGCGAATTGATAGAGACCCTGATTCTATTTCAC 536
                                                                *******************

consensus_14579#0      GGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCA 1320
consensus_14579#2      GGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCAGAGTCTGTAGGTACCGCA 79
consensus_14579#1      GGGCATACATAAAAACATTTTGCAAAAATGCTAGAAAACTCANAGTCTGTAGGTACCGCA 596
                       ****************************************** *****************

consensus_14579#0      GTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATG 1380
consensus_14579#2      GTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAATATACTTCACCGATG 139
consensus_14579#1      GTATGGAGGAAGAGTTTAGCTCTCCTGTTCTTTCTGAAGTTCAAAAATACTTCACCGATG 656
                       ********************************************* **************

consensus_14579#0      AAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAG 1440
consensus_14579#2      AAGACTACTGCTTTGCAATGAACTTCTATGTTCTGCTACGTGCTGTTGATCGACTTGCAG 199
consensus_14579#1      AANACTACTGCTTTGCAATGAACTTCTATGNTCTGCTACGCGCTGGTGATCGACTTGCAG 716
                       ** *************************** ********* **** **************

consensus_14579#0      CC-AACTATAACAGATGCCCTGGAATCTTTGAAAGTGAGATTGATGAGGATGTGCCTAGG 1499
consensus_14579#2      CC-AACTATAACAGATGCCCTGGAATCTTTGAAAG------------------------G 234
consensus_14579#1      CCCAACTATAACAGATGCCCTGGAATCTTTGAAAG------------------------G 752
                       ** ********************************                        *

consensus_14579#0      CTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTCT 1559
consensus_14579#2      CTGAAGACAGCTGCTGTTTCAGTAATGAGTGAGATGGGTATGAACGGGGCACCTTTGTTT 294
consensus_14579#1      CTGAAGACAGCTGCTGCTTCAGTAACGAGTGAAATGGGTATGAACGGGGCACCTTTGTCT 812
                       **************** ******** ****** ************************* *

consensus_14579#0      GAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGG-CTGC 1618
consensus_14579#2      GAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGG-CTGC 353
consensus_14579#1      GAAGACCTGATTACTGAAATGTGCCGGTTTGGGGGTGCAGAGATTCATCCCGTGGGCTGC 872
                       ******************************************************* ****

consensus_14579#0      CTT-CATTGGCGGAGT-AGCAT-CCCAAGAA---GTAATTAAGCTGGTC---ACCAAACA 1669
consensus_14579#2      CTT-CATTGGCGGAGT-AGCAT-CCCAAGAA---GTAATTAAGCTGGTC---ACCAAACA 404
consensus_14579#1      CTTGCATTGGCGGAGTGAGCATGCCCAAGAACGTGAATTGAAGCTGGGTGCAACCAAACA 932
                       *** ************ ***** ********   * * * *******     ********

consensus_14579#0      G--TTTGTGCCT-TTGCTGGG-AACATT----TATATTCAACGGG-ATTGAT-CACAAAT 1719
consensus_14579#2      G--TTTGTGCCT-TTGCTGGG-AACATT----TATATTCAACGGG-ATTGAT-CACAAAT 454
consensus_14579#1      CGTCTTGTGCCTGTTGCTGGGGAACATTGTGATGATTGCAACGGGGATTGATGCACAAAT 992
                           ******** ******** ******    *   * ******* ****** *******

consensus_14579#0      CT--CAAGTTTT-GGCGTTAT--AACAT-CAAT-CTGGT--ATAGAGCTTTTCGGAACCT 1770
consensus_14579#2      CT--CAAGTTTT-GGCGTTAT--AACAT-CAAT-CTGGT--ATAGAGCTTTTCGGAACCT 505
consensus_14579#1      GCTGCAAGTTTNTGGCGTTGATGAACATGCAATGCTGGGTGATAGAGCTTTTCGGAACCT 1052
                           *******  ******    ***** **** ****   *******************

consensus_14579#0      CACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATG 1830
consensus_14579#2      CACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGTGCAATG 565
consensus_14579#1      CACCCAATTAATTACATTAGAGTTGCCCCAGATTTTGTATTATGGCCTTCCGGCGCATGA 1112
                       ***************************************************** ***   

consensus_14579#0      AAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACAT 1890
consensus_14579#2      AAAATCACTTGTCCATATAAATGATCATTGTCAGATTTGGAATTATCATCGTATTTACAT 625
consensus_14579#1      ATAATCACTGGTCCATATAAAAAAAAAA-------------------------------- 1140
                       * ******* ***********  *  *                                 

consensus_14579#0      GGGAAAAGGTCAAAATACCCCTTGAAACAGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1950
consensus_14579#2      GGGGGAAGGTCAAAATACCCCTG------------------------------------- 648
consensus_14579#1      ------------------------------------------------------------
                                                                                   

consensus_14579#0      AAAAAAAAAAAAAAAAA 1967
consensus_14579#2      -----------------
consensus_14579#1      -----------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)