These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1965 fasta sequence [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA-GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC-TCAACGGCAGCCAAGCCCAGC-CACCAGCTCTGGCACCAATGCCGGT-ACTGAACTCATCAGACGTCACTGAACCG-CCGTTCCCTTCTG-CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG-TAATTGGTTGTTCAG-AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC-TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT-CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT-CAGAGGTGCAGGATTT-CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT-AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA] [+] EMBL AK065539 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGC ] [+] EMBL AK065218 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTC ] [+] EMBL CB633604 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTT ] [+] EMBL CB627976 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGGACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGNTATCTGACTTTC ] [+] EMBL CF303674 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTTCTGTATGCATGAGTTCAATT ] [+] EMBL OSS10850A [ TGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGAGGACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAA ] [+] EMBL OSS11352A [ TGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGNTATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTA ] [+] EMBL AU032379 [ ATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATNGGGGga ] [-] EMBL CB651421 [ GCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CC ] [-] EMBL CB633605 [ TGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCAGTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTT ] [+] EMBL CF279868 [ AGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGNTAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTT ] [+] EMBL AU095767 [ ggnAGCTACTTCAACGGCAGCCAAGCCCAGCNAACCAGCTCTGGCACCAATGCCGGTAACTGAACTCATCAGACGTCACTGAACCGCCCGTTCCCTTCTGCCCGCGCCGAAGAATGCACCTGGC GCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAA ] [+] EMBL BI797885 [ gctcCCCTCAGGCTCTCA GCC CTCCTGTCATGAGA CCCGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATT GTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGAC AAGGCTAC AATATATTCTA CAAGC CTGAACTACTGAATGAATGAA CCGTAAGTGTAACTAGTAGTGTAC TTGCTGACTGAGCTGGAAGCTTCCAGTGTAATGTTGTAA TAATCTCATCTCCTGTCTGAAGAGATCCATTTTGTATGTGTTCCAGAGGTCCAGGATTTCCCTTTGAACTTACTAGACGTGCCCCTAATTTTGTTTTAAACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCACAAAA ] [+] EMBL AU086020 [ CATCCTCAGTTGAAGCTGTG TAANTGGTTGTTCAGCAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCNTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAA ] [-] EMBL CF279869 [ CACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTAAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA] consensusID : consensus_14598#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence [CCCCACCACCAGCTCTGCACCAATCCGGTACTGAACTCATCAGACGTCACTGAACCCCTTCCCTTCTCCGCGCCGAAGAATGCACCTGCGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGCTCTCAGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGCTAGGAATCCCGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGTATAAATCTGTTTATAGGACAAGGCTACAAATATATTCTAGCAAGCCTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTGTAATGTTGTAATTAATCTCCAAAAAAAAAA] [+] EMBL BI810012 [CCCCACCACCAGCTCTGCACCAATCCGGTACTGAACTCATCAGACGTCACTGAACCCCTTCCCTTCTCCGCGCCGAAGAATGCACCTGCGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGCTCTCAGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGCTAGGAATCCCGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGTATAAATCTGTTTATAGGACAAGGCTACAAATATATTCTAGCAAGCCTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTGTAATGTTGTAATTAATCTCCAAAAAAAAAA] consensusID : consensus_14598#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence [CAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA] [+] EMBL AU173828 [CAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14598#0 AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCA 60 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTA 120 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATA 180 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 ACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTT 240 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGC 300 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 ACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTG 360 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 ATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTAT 420 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATC 480 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTT 540 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GGGCTGATATTAGCAGTAGCGATTTGAGACCCAAGATATCTTCCCCAGAGAGTATATATT 600 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 ATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTC 660 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTAT 720 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATG 780 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 CTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTG 840 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 CTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCAT 900 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 CAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTG 960 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAA 1020 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 ATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATG 1080 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 AGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATG 1140 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACA 1200 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 AAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAA 1260 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 TTGGCGGCCTAGCGCAGCTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTGGCACCAA 1320 consensus_14598#2 ----------------------------CAGCCAAGCCCAGCCACCAGCTCTGGCACCAA 32 consensus_14598#1 ------------------------------------CCCCACCACCAGCTCTG-CACCAA 23 *** ************ ****** consensus_14598#0 TGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGA 1380 consensus_14598#2 TGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGA 92 consensus_14598#1 T-CCGGTACTGAACTCATCAGACGTCACTGAACCCC--TTCCCTTCT-CCGCGCCGAAGA 79 * ******************************** * ********* ************ consensus_14598#0 ATGCACCTGGCGGCGCTGCCA-ATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGC 1439 consensus_14598#2 ATGCACCTGGCGGCGCTGCCA-ATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGC 151 consensus_14598#1 ATGCACCTG-CGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGC 138 ********* *********** **************************** ********* consensus_14598#0 TCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 1499 consensus_14598#2 TCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 211 consensus_14598#1 TCTCAG-CCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 197 ****** ***************************************************** consensus_14598#0 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 1559 consensus_14598#2 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 271 consensus_14598#1 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 257 ************************************************************ consensus_14598#0 AGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGC 1619 consensus_14598#2 AGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGC 331 consensus_14598#1 AGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGC 317 ******* * ************************************* ************ consensus_14598#0 TAGGAATCCA-GTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGT 1678 consensus_14598#2 TAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGT 391 consensus_14598#1 TAGGAATCCC-GTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGT 376 ********* ************************************** ********** consensus_14598#0 ATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAA 1738 consensus_14598#2 ATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA------ 445 consensus_14598#1 ATAAATCTGTTTATAGGACAA-GGCTACAAATATATTCTAGCAAGCCTGAACTACTGAAT 435 ********************* ********************** * consensus_14598#0 TGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTTCAGT 1798 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 GAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTG 495 consensus_14598#0 GTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTTCAGAG 1858 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 TAATGTTGTAATTAATCTCCAAAAAAAAAA------------------------------ 525 consensus_14598#0 GTGCAGGATTTCCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTTAACTGAATAAAT 1918 consensus_14598#2 ------------------------------------------------------------ consensus_14598#1 ------------------------------------------------------------ consensus_14598#0 GTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA 1965 consensus_14598#2 ----------------------------------------------- consensus_14598#1 ----------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||