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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1965 fasta sequence
[AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA-GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC-TCAACGGCAGCCAAGCCCAGC-CACCAGCTCTGGCACCAATGCCGGT-ACTGAACTCATCAGACGTCACTGAACCG-CCGTTCCCTTCTG-CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG-TAATTGGTTGTTCAG-AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC-TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT-CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT-CAGAGGTGCAGGATTT-CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT-AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA]
[+] EMBL AK065539 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGC ]
[+] EMBL AK065218 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTC ]
[+] EMBL CB633604 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTT ]
[+] EMBL CB627976 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGA GACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGGACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGNTATCTGACTTTC ]
[+] EMBL CF303674 [AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTTCTGTATGCATGAGTTCAATT ]
[+] EMBL OSS10850A [ TGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGAGGACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAA ]
[+] EMBL OSS11352A [ TGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGNTATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTA ]
[+] EMBL AU032379 [ ATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATNGGGGga ]
[-] EMBL CB651421 [ GCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CC ]
[-] EMBL CB633605 [ TGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCAGTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTT ]
[+] EMBL CF279868 [ AGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTAC TCAACGGCAGCCAAGCCCAGC CACCAGCTCTGGCACCAATGCCGGT ACTGAACTCATCAGACGTCACTGAACCG CCGTTCCCTTCTG CCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGNTAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTT ]
[+] EMBL AU095767 [ ggnAGCTACTTCAACGGCAGCCAAGCCCAGCNAACCAGCTCTGGCACCAATGCCGGTAACTGAACTCATCAGACGTCACTGAACCGCCCGTTCCCTTCTGCCCGCGCCGAAGAATGCACCTGGC GCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATTGGTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAA ]
[+] EMBL BI797885 [ gctcCCCTCAGGCTCTCA GCC CTCCTGTCATGAGA CCCGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTG TAATT GTTGTTCAG AGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGAC AAGGCTAC AATATATTCTA CAAGC CTGAACTACTGAATGAATGAA CCGTAAGTGTAACTAGTAGTGTAC TTGCTGACTGAGCTGGAAGCTTCCAGTGTAATGTTGTAA TAATCTCATCTCCTGTCTGAAGAGATCCATTTTGTATGTGTTCCAGAGGTCCAGGATTTCCCTTTGAACTTACTAGACGTGCCCCTAATTTTGTTTTAAACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCACAAAA ]
[+] EMBL AU086020 [ CATCCTCAGTTGAAGCTGTG TAANTGGTTGTTCAGCAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCNTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAA ]
[-] EMBL CF279869 [ CACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCC TGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTAAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTT CAGTGTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTT CAGAGGTGCAGGATTT CCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTT AACTGAATAAATGTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA]
consensusID : consensus_14598#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[CCCCACCACCAGCTCTGCACCAATCCGGTACTGAACTCATCAGACGTCACTGAACCCCTTCCCTTCTCCGCGCCGAAGAATGCACCTGCGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGCTCTCAGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGCTAGGAATCCCGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGTATAAATCTGTTTATAGGACAAGGCTACAAATATATTCTAGCAAGCCTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTGTAATGTTGTAATTAATCTCCAAAAAAAAAA]
[+] EMBL BI810012 [CCCCACCACCAGCTCTGCACCAATCCGGTACTGAACTCATCAGACGTCACTGAACCCCTTCCCTTCTCCGCGCCGAAGAATGCACCTGCGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGCTCTCAGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGCTAGGAATCCCGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGTATAAATCTGTTTATAGGACAAGGCTACAAATATATTCTAGCAAGCCTGAACTACTGAATGAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTGTAATGTTGTAATTAATCTCCAAAAAAAAAA]
consensusID : consensus_14598#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence
[CAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA]
[+] EMBL AU173828 [CAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTCAGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGCTAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGTATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14598#0 AGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCA 60
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTA 120
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATA 180
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 ACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTT 240
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGC 300
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 ACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTG 360
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 ATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTAT 420
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATC 480
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTT 540
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GGGCTGATATTAGCAGTAGCGATTTGAGACCCAAGATATCTTCCCCAGAGAGTATATATT 600
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 ATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTC 660
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTAT 720
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATG 780
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 CTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTG 840
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 CTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCAT 900
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 CAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTG 960
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAA 1020
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 ATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATG 1080
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 AGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATG 1140
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACA 1200
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 AAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAA 1260
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 TTGGCGGCCTAGCGCAGCTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTGGCACCAA 1320
consensus_14598#2 ----------------------------CAGCCAAGCCCAGCCACCAGCTCTGGCACCAA 32
consensus_14598#1 ------------------------------------CCCCACCACCAGCTCTG-CACCAA 23
*** ************ ******
consensus_14598#0 TGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGA 1380
consensus_14598#2 TGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGA 92
consensus_14598#1 T-CCGGTACTGAACTCATCAGACGTCACTGAACCCC--TTCCCTTCT-CCGCGCCGAAGA 79
* ******************************** * ********* ************
consensus_14598#0 ATGCACCTGGCGGCGCTGCCA-ATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGC 1439
consensus_14598#2 ATGCACCTGGCGGCGCTGCCA-ATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGC 151
consensus_14598#1 ATGCACCTG-CGGCGCTGCCACATGGGAGCACCCCTGCACCCGGTGCGTCCCCGTCAGGC 138
********* *********** **************************** *********
consensus_14598#0 TCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 1499
consensus_14598#2 TCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 211
consensus_14598#1 TCTCAG-CCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCG 197
****** *****************************************************
consensus_14598#0 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 1559
consensus_14598#2 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 271
consensus_14598#1 TCTCTGCTCATCTGAGCTGACATCCTCAGTTGAAGCTGTGTAATTGGTTGTTCAGAGTTC 257
************************************************************
consensus_14598#0 AGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGC 1619
consensus_14598#2 AGTTATCNCNCTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCAATGCTGTGCTGC 331
consensus_14598#1 AGTTATCACACTTTCCATTGGATTGGGAAAGCTATTTATTGTCTGTCCATGCTGTGCTGC 317
******* * ************************************* ************
consensus_14598#0 TAGGAATCCA-GTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGT 1678
consensus_14598#2 TAGGAATCCNAGTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTNTTCCTGCTGT 391
consensus_14598#1 TAGGAATCCC-GTAGCTGTTTTGGTAGGGAAACATCTGAATATCCGTTTCTTCCTGCTGT 376
********* ************************************** **********
consensus_14598#0 ATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAGCACTGAACTACTGAA 1738
consensus_14598#2 ATAAATCTGTTTATAGGACAAAGGCTACAAATATATTCTAGCAAAAAAAAAAAA------ 445
consensus_14598#1 ATAAATCTGTTTATAGGACAA-GGCTACAAATATATTCTAGCAAGCCTGAACTACTGAAT 435
********************* ********************** *
consensus_14598#0 TGAATGAAGCCGTAAGTGTAACTAGTAGTGTACATTGCTGACTGAGCTGGAAGCTTCAGT 1798
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 GAATGAAGCCGTAAGTGTAACTAGTAGTGTACCTTGCTGACTGAGCTGGAAGCTTCAGTG 495
consensus_14598#0 GTAATGTTGTAATTAATCTCATCTCCTGTCTGAAGAGATGCATTTTGTATGTGTTCAGAG 1858
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 TAATGTTGTAATTAATCTCCAAAAAAAAAA------------------------------ 525
consensus_14598#0 GTGCAGGATTTCCTTTGAACTTACTAGACGTGGCCCTAATTTTGTTTTAACTGAATAAAT 1918
consensus_14598#2 ------------------------------------------------------------
consensus_14598#1 ------------------------------------------------------------
consensus_14598#0 GTGGGTGAAATCTGTAGCATGAGATCAAAAAAAAAAAGAAAAAAAAA 1965
consensus_14598#2 -----------------------------------------------
consensus_14598#1 -----------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||