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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14607#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1057 fasta sequence
[ATCCATCCCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG-AAAGGGGACACGCTT-AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG-CAAGGCAAC-GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT-GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA-GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT-GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT-ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC-TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAATATTT-GGGTTGGGTGGGCC-AAATGGC-CGT-GGCAGTCTGGTGGTCGTAGGTTGGGCCG-TTGGTCGCTGTATTATTAGGCCCAAACATAGGGATTTCAACACATTTTTTAATGAAAACTTTCATCTGAAAAAACCTTCGTTTGGAAAAAAA]
[+] EMBL AK071751 [ATCCATCCCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTT ]
[+] EMBL AK104610 [ ATCCCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTT ]
[+] EMBL CF324797 [ ATCCCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAG ]
[+] EMBL AK058369 [ CCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCAT ]
[+] EMBL CF312951 [ CCCAACGCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGGGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATCGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCT ]
[+] EMBL AU096858 [ GCCATGGCCTCCACGCTCGCCTGGAGCTCCGCCGCCTCCTCCTCCGCCCCCTCCTCCCGCCTCCCGCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACANGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAAGCACAGCAACTTGGCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAn ]
[+] EMBL BF430686 [ CGCCTCCCGCCGCGCCGCTCCCCGTCCCTGGTCATCGTCGCCCAGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTC AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCCAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACA ]
[+] EMBL CB000167 [ GCCGCGCCGCTCCCCGTCGCTGGTCGTCGTCGCCCTGGGCAAGGTCAAGAAGTATCGCCAGGTCATACTGACAGATGACATAGCAGAGGTGGGGAAG AAAGGGGACACGCTT AAAGTGAGGGCCGGGTTCTACCGCAACTTCCTTCTGCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGT ]
[+] EMBL AU096859 [ AAGAAAAGGGGACACGCTTAAAAGTAAGGCCNGGGTTCTACNGCAATTTCCTTCTGCCAAAGGGCCAAGGCAACGGCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGANCAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAAaaaaa ]
[+] EMBL AU174833 [ GCCAAAGGG CAAGGCAAC GCTGCTCACCCCAGAAGTACTCAAGGAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGT GTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGG ]
[-] EMBL CF312952 [ GAAATGCAAGTAGAACAGGAGAGGATAGATGCTGAAAAGAAGCGGGTAAAAGAAGAGGCACAGCAACTTGCCCGTGGTTTTTGAAACTATTGGGGCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATA GGGATGTCGACAAGCGTCTCGTGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATCGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCAaaaaa ]
[+] EMBL AU174832 [ TGACAGTGCCAGAAATTCGTGAAATTGGGGAATACATTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCNCCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAAaaaaa aaaa ]
[+] EMBL OSS16391A [ TTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGGGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAATATTT GGGTTGGGTGGGCCAAAATGGCACGT GGCAGTCTGGTGGTCGTAGGTTGGGCCG TTGGGCGCTGTNTTATTAGGC ]
[+] EMBL OSS16382A [ TTGCAGAGATTAAGCTTCACCCTGAAGTCACAGCTCAAGTAAGGCTGACCGTATATGCGAAATAAGCCCTGAAGCTGCTTGATTGAATCTTTAGTGGATGGT GGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGGTTGATAGAGCTACTACAATATTTGGGGNTGGGTGGGCC AAATGGC CGT GGC ]
[+] EMBL AU096856 [ TGGTNGGGCTTTGGATGAATTCTGATTTCACCAGAGATTTTTGCTGAAACTCCAAGGTGCAGTGTCACATCACGGGGCTTGGTCTTTACACATTGCCACTGTCCATCCTACCTGTAAAGTCAGTTTCTTGCACCTTTTTTTTTTTGACAAATTT ATTTGTGTTAATGTTATGGGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAATATTT GGGTTNGGTGGGCCAAAATGGCACGTAGGCAGTCTGGTGGTCGTAGGTTGGGCCGCTTGGTCGCTGTATTATTAGGCCCAAACATAGGGATTTCAACACATTTTTTAATGAAAACTTTCATCTGAAAAAACCTTCGTTTGGAAAAAA ]
[+] EMBL AU096854 [ AAATTTCATTTGTGTTAATGTTAT GGGTTAAATGGGCATGATGTAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTCNTTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAATATTT GGGTTGGGTGGGCCAAAATGGCACGTAGGCAGTCTGGTGGTCGTAGGTTGGGCCGCTTGGTCGCTGTATTATTAGGCCCAAACATAGGGATTTCAACACATTTTTTAATGAAAACTTTCATCTGAAAAAACCTTCGTTTGGAAAAAAA]
[+] EMBL AK060728 [ TAAACAACAAAGGGTTCAGAGTCTAGAGCAACTGATACTTGTC TTGTAATCTTGTTTAAAGGTGCACGTTCTTTATAGTCATATAGTTTGATAGAGCTACTACAATATTT GGGTTGGGTGGGCCAAAATGGCACGTAGGCAGTCTGGTGGTCGTAGGTTGGGCCGCTTGGTCGCTGTATTATTAGGCCCAAACATAGGGATTTCAACACATTTTTTAATGAAAACTTTCATCTGAAAAAAC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||