cluster # 14619

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Oryza sativa
cluster # 14619 cluster # 14619 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14619#0 length = 2295 sequences # 13

consensus_14619#1 length = 849 sequences # 3
consensus_14619#2 length = 562 sequences # 1

consensusID : consensus_14619#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 2295
fasta sequence

                              [TTCTCTCTCTCTCTCTCATCTCTCTCAGTGAGGAGTGGTGGTGTAGCTAAGCTAGGGTTTCGCTCGGAATCAGGGTTCGTTTTCCTCCACCGGAATTGGCGGCGATCTGGAGCTCGGCACGGCGGCGCGCGGCGTGATCCGGACGCTCGGGTAGGTGAGGGAGGGAGGGAGGAGATGAAGTCGTCGCTGCGGAAGCTGCGGGGCTTCGCGCTGCAGCGCCACGAGCAGCGGGTGGACCGCCGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAGGATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCAAATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGAGTCACACCAAACAAGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAGTTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCATCACAGTCCCTTCTCAATGAACTTCAAACTGTAGAGGAAATGAAGCACCAGTGTGATG-AAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCACAGAAAGAAAAGGGAAGATCTAAGAATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAAGAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGTCTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTCAAATCTCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTG-AAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATT-TTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTT-TACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCA-GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGC-AAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGTCCCAAAAAATAAAAG]

[+] EMBL AK067488             [TTCTCTCTCTCTCTCTCATCTCTCTCAGTGAGGAGTGGTGGTGTAGCTAAGCTAGGGTTTCGCTCGGAATCAGGGTTCGTTTTCCTCCACCGGAATTGGCGGCGATCTGGAGCTCGGCACGGCGGCGCGCGGCGTGATCCGGACGCTCGGGTAGGTGAGGGAGGGAGGGAGGAGATGAAGTCGTCGCTGCGGAAGCTGCGGGGCTTCGCGCTGCAGCGCCACGAGCAGCGGGTGGACCGCCGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAGGATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCAAATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGAGTCACACCAAACAAGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAGTTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCATCACAGTCCCTTCTCAATGAACTTCAAACTGTAGAGGAAATGAAGCACCAGTGTGATG AAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCACAGAAAGAAAAGGGAAGATCTAAGAATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAAGAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGTCTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTCAAATCTCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTG AAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGCGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATT TTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTT TACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCA GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGC AAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTT                                                  ]
[+] EMBL OSC104261            [                                                                                                                                                                                     CGTCGCTGCGGAAGCTG GGGGCTTCGCGCTGNAGNG CACGAGCAGCGGGTGGACCGCCGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAGGATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCAAATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGAGTCACACCAAACAAGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAGTTTGAACTGCGGAAGTTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB621739             [                                                                                                                                                                                                                CGCTGCAGCGCCACGAGCAGCGGATGGACCGCCGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAGGATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCAAATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGAGTCACACCAAACACGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAGTTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCATCACAGTCCCTTCTCAATGAACTTCAAACTGTAGAGGAAATGAAGCACCAGTGTGATGAAAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCGCAGAAAGAAAAGGGAAGATCTAAGAATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAAGAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGTCTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTCAAATCTCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAG AAATGAGGATGATTACAATGACAGTCATGAAGA TTATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF305705             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAGTTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCATCACAGTCCCTTCTCAATGAACTTCAAACTGTATAGGAAATGAAGCACCAGTGTGATG AAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCACAGAAAGAAAAGGGAAGATCTAAGAATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAAGAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGTCTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTCAAATCTCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB000729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTG AAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA998262             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTG AAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BP184730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTGAAAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF324905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTG AAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB634762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACTCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCNCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATT TTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTT TACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCA GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGC AAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGAGGAATAAAATCTCCATTTTTC                                                 ]
[-] EMBL CB669001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATT TTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTT TACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCA GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGC AAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGTCCCAAAAATTAAAAG]
[+] EMBL BI813601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCA T TTA GCCGA GCAAACACCACCAAGTGCTCCCC AAC GCATCACCTTGTACCGACACCACCTGGGCCTATATCCC CAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCA GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGCAAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGT  CAAAAAA      ]
[+] EMBL BM420326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATTGTTAGGCCGA GC AACACC CCAAGTGCTCCCCAAACTGCATCACCTT TACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCAC AACATCGTTGGAGGATCATCGGCCCTTGTCACGGAGCTACCGAGTCAGTTAGCCAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCCTGGAAGAATATTGTACATATTAGTATGTGAACTCGGCC ATATTGC  AATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGC AATAACGAGTTGTGGAATAAAATCTCCANTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGTCCAAAAAAA      ]
[-] EMBL CF327162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTTTTCAATCCTTTTTAGGGGCATGAGAACATCAGTTATTTCAGATGGTAAAGAGACAGAAGTTTTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTTTAGTTTTCTTTCAGCACAAACATGGTTGGAGGATCATCGGCCATTGTCA GGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGTTCAGTTATTTCGCCATGGAAGAATATTGTACATATTAGTATGTGAATTGGGCCAATATTGC AAATTAGTGGGTGTTTGGTTTGTATCCCCCATGGTTAAAATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTTTCTCCGATTAATTAATGTAAGATTTGTTTGTTGTGCCAAAAAAaa    ]




>consensus_14619#0
TTCTCTCTCTCTCTCTCATCTCTCTCAGTGAGGAGTGGTGGTGTAGCTAAGCTAGGGTTT
CGCTCGGAATCAGGGTTCGTTTTCCTCCACCGGAATTGGCGGCGATCTGGAGCTCGGCAC
GGCGGCGCGCGGCGTGATCCGGACGCTCGGGTAGGTGAGGGAGGGAGGGAGGAGATGAAG
TCGTCGCTGCGGAAGCTGCGGGGCTTCGCGCTGCAGCGCCACGAGCAGCGGGTGGACCGC
CGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAG
GATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCA
AATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGA
GTCACACCAAACAAGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAG
TTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACT
CCATCACAGTCCCTTCTCAATGAACTTCAAACTGTAGAGGAAATGAAGCACCAGTGTGAT
GAAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCACAGAAAGAAAAGGGAAGATCTAAG
AATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAA
GAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGT
CTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTC
AAATCTCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGAC
CATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGAT
TACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAA
GCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTAT
TCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTGAA
AAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTA
TATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCA
AATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAG
CCAAGTACAAATGTGGGAGATTTGAGAGACAATAAGCTACCAAGTCCTACCAGATTATCT
AATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAATGCTT
GTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGACAAC
AAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAG
AATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAATACAT
GTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGAGCTT
CATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTC
GCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCAT
TTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGACACCA
CCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATT
TCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCT
AGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTACCGAG
TCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCT
CAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGC
AAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGA
GTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGT
CCCAAAAAATAAAAG

consensusID : consensus_14619#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 849
fasta sequence

                              [TCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAACTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAA-GGAGCTT-CATGA-G-C-TTCC-TCGGC--CACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGTGCCCTTGAGATGACTTGAATGCCACCTGTTTTCCACTGCTAAAAAAAAAGA]

[-] EMBL CB621740             [TCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAACTCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAA GGAGCTT CATGA G C TTCC TCGGC  CACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTGTTGTGCCCTTGAGATGACTTGAATGCCACCTGTTTTCCACTGCTAAAAAAAAAGA]
[+] EMBL BQ907815             [                                                                                                                                                                                    aaaatatTCAAGGGAGCTTCCATGACGTCTTTCCTTCGGCCACACCTG TAATGCATC AAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCaaaaa                                                                            ]
[+] EMBL BP184731             [                                                                                                                                                                                                  AGCTT CATGA G C TTCC TCGGC  CACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGAaaaaa                                                                 ]




>consensus_14619#1
TCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCC
AGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAACTCTTCA
CATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCA
CCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACA
ACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCA
CCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCA
TCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGC
ATGAGAACATCAGGTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCT
GCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCA
TTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAG
TTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGT
GAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATG
TAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGAT
GTAAGATTTGTTTGTTGTGCCCTTGAGATGACTTGAATGCCACCTGTTTTCCACTGCTAA
AAAAAAAGA

consensusID : consensus_14619#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence

                              [TGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTGAAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTAAATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGNNATTTGNNNNNCNATAAGCTACCAAGTCCTANNNNNNNATCTAATGCNNATTCAGNTTTNNNNNNNNNNNAT]

[+] EMBL CF196980             [TGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTTCAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTGAAAAAAAACTTGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTAAATACTTATGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTACTAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTACAAATGTGGGNNATTTGNNNNNCNATAAGCTACCAAGTCCTANNNNNNNATCTAATGCNNATTCAGNTTTNNNNNNNNNNNAT]




>consensus_14619#2
TGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGACCATCAGTT
CAGTGCACTTGACGAGGAGGATTACTCTGTGGATGAAGAAAATGAGGATGATTACAATGA
CAGTCATGAAGATTTATCCTTTGATTATGGAGAAAATAAGGAAGGCACAGAAGCTGGTCA
TGCTTCCAGGAGCCCTACAGAGGAACTTCTTGACAGAAGCAAAGCAGAGTATTCCTCTTT
TCCTGGTGAAAGGCAGAGATCTGGAAGTCAGTCAGCCCCACTTTTTCCTGAAAAAAAACT
TGAGGCAGCAGAGAGAATAAAAGAGTTGCGGCGTTCTGCTACGAGGAAGCTAAATACTTA
TGTTTTGCCTACTCCAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCTAC
TAGTGGATCTCCTCTTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGCCAAGTAC
AAATGTGGGNNATTTGNNNNNCNATAAGCTACCAAGTCCTANNNNNNNATCTAATGCNNA
TTCAGNTTTNNNNNNNNNNNAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14619#0      TTCTCTCTCTCTCTCTCATCTCTCTCAGTGAGGAGTGGTGGTGTAGCTAAGCTAGGGTTT 60
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      CGCTCGGAATCAGGGTTCGTTTTCCTCCACCGGAATTGGCGGCGATCTGGAGCTCGGCAC 120
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GGCGGCGCGCGGCGTGATCCGGACGCTCGGGTAGGTGAGGGAGGGAGGGAGGAGATGAAG 180
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TCGTCGCTGCGGAAGCTGCGGGGCTTCGCGCTGCAGCGCCACGAGCAGCGGGTGGACCGC 240
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      CGCGGGGGCCACTCCCCGGCCGCCGCCGCCGCCGCGAACGAGCTCCTCGCCGCCTCGCAG 300
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GATATGGCAGATATGAGGAGCTGTTATGACAATCTGCTTTCTGTTGCAGCAGCGATTGCA 360
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      AATAGTGCATATGAGTTCTCAGAAGCACTGCAGGAAATGGGGACTTGTTTACTTAAAAGA 420
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GTCACACCAAACAAGGACGGGATTAATGATAAAGTTTTGCTGTTGCTTGGAAAGGCCCAG 480
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TTTGAACTGCGGAAGCTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACT 540
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      CCATCACAGTCCCTTCTCAATGAACTTCAAACTGTAGAGGAAATGAAGCACCAGTGTGAT 600
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GAAAAAAGAGAGTTGTTCGAATTTCTGCTGAATGCACAGAAAGAAAAGGGAAGATCTAAG 660
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      AATGCCAAAAGTGACATTGGTGCGTCAGAGCAATTGAAACAAGCTCAGGACGATTATCAA 720
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------TCGAAGGCTTCTGACAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATT 54
                                                                                   

consensus_14619#0      GAAGAAGCAACTCTTTTTCTATTCCGGTTAAAGTCATTGAAGCAAGGACAGTTCAGAAGT 780
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      GTTCCCAGGTCAAGGTCAACAGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAAC 114
                                                                                   

consensus_14619#0      CTTTTCACACAAGCTGCTCGGCACCATGCTGCTCAGCTAAATTTATTCAGAAAGGGGCTC 840
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      TCTTCACATCAGCCGTCAATACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTG 174
                                                                                   

consensus_14619#0      AAATCTCTTGAGGCTGTAGAGCCACATG------TTAGGCTTGCTGCTGA-GCAGCAACA 893
consensus_14619#2      --------TGAGGCTGTAGAGCCACATG------TTAGGCTTGCTGCTGA-GCAGCAACA 45
consensus_14619#1      TCCTCACCTAAAATCAAGGAGCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAA 234
                               * *       ****  ****       * ***   ***** * *** *** *

consensus_14619#0      CATTGACCAT----CAGTTCAGT----------GCAC--TTGACGAGGAGGATTACTCTG 937
consensus_14619#2      CATTGACCAT----CAGTTCAGT----------GCAC--TTGACGAGGAGGATTACTCTG 89
consensus_14619#1      CATACAACATTTCCCAGTTTAGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCT 294
                       ***  * ***    ***** ***          ****  ***  *   *    * ***  

consensus_14619#0      TGGATGAAGAAAA-TGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTAT 996
consensus_14619#2      TGGATGAAGAAAA-TGAGGATGATTACAATGACAGTCATGAAGATTTATCCTTTGATTAT 148
consensus_14619#1      TTGGCACCCAGAGGCCAGGATCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAA 354
                       * *      * *    ***** ***  *     ** **   *     *     *    * 

consensus_14619#0      GGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTT 1056
consensus_14619#2      GGAGAAAATAAGGAAGGCACAGAAGCTGGTCATGCTTCCAGGAGCCCTACAGAGGAACTT 208
consensus_14619#1      ACTGCATCACCTTTACCGACACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCT 414
                          * *        *   ***  * **** * *   *** * **   * *         *

consensus_14619#0      CTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGA--- 1113
consensus_14619#2      CTTGACAGAAGCAAAGCAGAGTATTCCTCTTTTCCTGGTGAAAGGCAGAGATCTGGA--- 265
consensus_14619#1      AGGGGCATGAGAACATCAG-GTATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAA 473
                          * **  ** * * *** ***** *   *      * ** **       ** ***   

consensus_14619#0      --AGTCAGTCAG---------CCCCACTTTTTCCTGAAAAAAAAC----TTGAGGCAGCA 1158
consensus_14619#2      --AGTCAGTCAG---------CCCCACTTTTTCCTGAAAAAAAAC----TTGAGGCAGCA 310
consensus_14619#1      AGGGCCTGCCAGAATGAGCCTTTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCA 533
                          * * * ***           * * * ** * * *  * ****    ***  * * **

consensus_14619#0      GAGAGAATAA--AAGAGTTGCGGCGTTCTGCTACGAGGAAGCTATATACTTA-TGTTTTG 1215
consensus_14619#2      GAGAGAATAA--AAGAGTTGCGGCGTTCTGCTACGAGGAAGCTAAATACTTA-TGTTTTG 367
consensus_14619#1      TCGGCCATTGTCAGGAGCTACCGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAG 593
                         *   **    * *** * * * **       * *   *     *** **  ****  *

consensus_14619#0      -------CCTACTC--CAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCT 1266
consensus_14619#2      -------CCTACTC--CAAATGATGTTAGAGACACCTCTCAGACAGTTACAGCAAATCCT 418
consensus_14619#1      GTGAAAGTTTATTTATCAAGGGGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATT 653
                                ** *   ***  *          * *  *   **    **  * * **  *

consensus_14619#0      ACTAGTGGATCTCCTC-----TTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGC 1321
consensus_14619#2      ACTAGTGGATCTCCTC-----TTGGAAACAAAGGTGCATTCTATTCATCTCCACTCCAGC 473
consensus_14619#1      AGTATGTGAACTCGGCCAATATTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGT 713
                       * **   ** ***  *     *** ***  *    *  **   **  * *** *    * 

consensus_14619#0      CAAG-TACAAATGTG--GGAGATTTGAGAGACAATAAGCTACCAAGTC--CTACCAGATT 1376
consensus_14619#2      CAAG-TACAAATGTG--GGNNATTTGNNNNNCNATAAGCTACCAAGTC--CTANNNNNNN 528
consensus_14619#1      TAAGATGTAATTGTGCAAATAACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATT 773
                        *** *  ** ****      *   *       ****  *  * * *   **        

consensus_14619#0      ATCTAATGCACATTCAGTTTTGAAAGAGAGCAATACCAATACTACAGACACCAGGACAAT 1436
consensus_14619#2      ATCTAATGCNNATTCAGNTTTNNNNNNNNNNNAT-------------------------- 562
consensus_14619#1      AATTGATGTAAGATTTGTTTGTTGTGCCCTTGAGATGACTTGAATGCCACCTGTTTTCCA 833
                       *  * ***     *  * **            *                           

consensus_14619#0      GCTTGTGCTCCCTTTGGGTGATCTCTCTTTACCTGGTTATCATGACTCGAAGGCTTCTGA 1496
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      CTGCTAAAAAAAAAGA-------------------------------------------- 849
                                                                                   

consensus_14619#0      CAACAAAAAGGTGAAGAGAGGATCCTTTTCTGGTCCTATTGTTCCCAGGTCAAGGTCAAC 1556
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      AGAGAATATTGATGTTGTTTCTGTACCACCTAGGCACAGCTCTTCACATCAGCCGTCAAT 1616
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      ACATGTCAGAGTTTCTCCCAATACCTCGCCACCACTGTTGTCCTCACCTAAAATCAAGGA 1676
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GCTTCATGAGCTTCCTCGGCCACCTGCTAATGCATCAAAACATACAACATTTCCCAGTTT 1736
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      AGTCGCCCACTCTGCACCGTTGGTGCCAAATTCTGCTCCTTTGGCACCCAGAGGCCAGGA 1796
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TCATTTTAGGCCGAGGCAAACACCACCAAGTGCTCCCCAAACTGCATCACCTTTACCGAC 1856
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      ACCACCTGGGCCTATATCCCGCAGTTTTTCGATACCTTCTAGGGGCATGAGAACATCAGG 1916
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TATTTCAGATGGTAAAGAGACAGAAGATCTTCAGGATAAAGGGCCTGCCAGAATGAGCCT 1976
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TTCTAGTCTTCCTTCAGCACAAACATCGTTGGAGGATCATCGGCCATTGTCAGGAGCTAC 2036
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      CGAGTCAGTTAGCAAAACATAGGAATATTTGGTGTTGAGGTGAAAGTTTATTTATCAAGG 2096
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      GGCTCAGCTATCTCGCCATGGAAGAATATTGTACATATTAGTATGTGAACTCGGCCAATA 2156
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TTGCAAATTAGTTGGTGTTTCGTTTGTATCCCCCATGGTTAAGATGTAATTGTGCAAATA 2216
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      ACGAGTTGTGGAATAAAATCTCCATTTTTCTCTCCGATTAATTGATGTAAGATTTGTTTG 2276
consensus_14619#2      ------------------------------------------------------------
consensus_14619#1      ------------------------------------------------------------
                                                                                   

consensus_14619#0      TTGTCCCAAAAAATAAAAG 2295
consensus_14619#2      -------------------
consensus_14619#1      -------------------