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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1676 fasta sequence
[TATACAAATACCAATCCACCCCTCCTCTCCTCCTCCTCCTTTTTCCTCCCCCTTCCGAAACGACGAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT-----AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT-GACGTGCTCACGG-AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT-CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA-TGATAATCCACCTCGTACA-ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT-GGGTTCA-GTTGTTGGCTCGGAACCT-CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT-CCAGAATCTGAGTTT-CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA-GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG-CCCCT-TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCACATGCTTGTCTGACTTCTAATTGATGTGCTTGTTTCTAACTTCCTATTATGATGCTAAATTGATATGACGAGTTGAGAAAGAGAGGTTGTTCAGTTTTTACTTTACTTTGAATTATTGTTGCCATTTTAGGTGACCTTTTTTACATAACAGTGAAGCATG]
[+] EMBL AK100129 [TATACAAATACCAATCCACCCCTCCTCTCCTCCTCCTCCTTTTTCCTCCCCCTTCCGAAACGACGAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACGTACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG CCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACC ]
[+] EMBL AK067586 [ TCCCCCTTCCGAAACGACGAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG CCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACC ]
[+] EMBL AK059785 [ CCCCCTTCCGAAACGACGAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGATAGGACAGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG CCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCACATGCTTGTCTGACTTCTAATTGATGTGCTTGTTTCTAACTTCCTATTATGATGCTAAATTGATATGACGAGTTGAGAAAGAGAGGTTGTTCAGTTTTTACTTTACTTTGAATTATTGTTGCCATTTTAGGTGACCTTTTTTACATAACAGTGAAGCATG]
[+] EMBL AU085698 [ GAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGACGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGACTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGNCAAGACGGTTGAGAGGAATGACCACCGACTNCTCTGAAGTAAACGTGNTCACGGAAGGTCTT ]
[+] EMBL CB666498 [ AAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATT ]
[+] EMBL CB660171 [ AAAAGC CCTGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCC ]
[+] EMBL CB623568 [ AACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCCCGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCCTGCCGTGGGGGCTCTCTCCGCTGTGGATGAT AGGGAGGCTCGACGATGGGAGGGAAGAAGGCCAAGACGGTGGAGAGGAATGACCACCGCCTGCTCTGCAGT GACGTGCTCACGG AGGTCTTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATGTCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTCCTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGACACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAA TTTGATGT ]
[+] EMBL CF196812 [ GGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGACGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATnngnnnacc ]
[+] EMBL CF197177 [ GGAGCCTCTTTGTGCACAATTCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCGACGACCGGCGAATCGGCTACTCTGCCGATGCCGACGTATACCGCAGGGAGCAGCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACC ]
[-] EMBL CB666499 [ AGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG CCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCACATGCTTGTCTGACTTCTAATTGATGTGCTTGTTTCTAACTTCAAGTTATGATGCTAAATTGATATG ]
[-] EMBL CB623569 [ TGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTT CCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTCCCGCAGTTCACAGAATTACAAAATTGTGCCCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCACATGCTTGTCTGACTTCTAATTGATGTGCTTGTTTCTAACTTCCTATTATGATGCTAAATTGATATGACGAGTTGAGAA ]
[+] EMBL BI808599 [ ATTTTGATGTGATGATGCTTCCCCCCACGCAAGTCGTATGGAGGCCATTGCTCTTT GCCGAGCTTGA GGAAAGCTATGC TGCTAATTGTGGAGGGT GACA TGATAATCCACCTCGTACA ATGGACATATTGATGCTTGATAGTGGTGATAAGAC ACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA TTTGTT GCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGGTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTAC AAATTGTGCCCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCAaaaaaaaaa ]
[+] EMBL BM421575 [ caAATTCGTATGGA GGCATTGCTCTTT GCGGAGCTTGAGGGAAAGCTATGCTTGCTA TTGTGGAGGGTGGACACTGATAATCCACCTCGTACACATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCCAAACACACTTTGTTCCATGAGGGAAAAATTT GGGTTCA GTTGTTGGCTCGGAACCT CTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGTCCCAGAATCTGAGTTTCCCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGC AAGATTACTTCATCAAGCAGATACACGTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCC CAGTTCACAGAATTAC AAATNGTGCCCCCTNTTGTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGT GCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATCCAGTATTGAAACCTCaaaaaa ]
[+] EMBL AU068354 [ AATTTGGGGTCCAGGTTGTGGNCNCGGAACCTCCTACTGTTATGANCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGT CCAGAATCTGAGTTT CCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACA GTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTG CCCCT TTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGCAaaaaaaaaa ]
consensusID : consensus_14629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 775 fasta sequence
[GCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTTCCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCAGTTGTTGGCTCGGAACCTCTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGTCCAGAATCTGAGTTTCCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACAGTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTGCCCCTTTTTCCTTTTCAAAAAAAGGA]
[-] EMBL CB668447 [GCCAGTTCTCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTACATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTTCCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCAGTTGTTGGCTCGGAACCTCTACTGTTATGATCCAAGTTCAAGCTCCACTGAACTGAAGATGGCATGTCCAGAATCTGAGTTTCCTTTTAGCACACATACTTTCATTGAAAGCATAGTTCCTCTGCGCAAAGATTACTTCATCAAGCAGATACAGTGATAATGGTGTTCATCACTTGTTTTCCAGATGTTCCGCAGTTCACAGAATTACAAAATTGTGCCCCTTTTTCCTTTTCAAAAAAAGGA]
[+] EMBL CA767103 [ ggggGATTCTTTCAATGTGTGCTGCGAGATATTCACTATTGGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTGCATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATCAATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTTCCCCCACGCAAGTCGTATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAGGGTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTC ]
consensusID : consensus_14629#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence
[GGAGGNTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCCAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCANGTTGTTGGCTCGGAACCTCTGACTGGTTGATGGATGCCAAGTTGCAAGCTGCCACCTGGAACTGGAAGATGGGCATGGTGCCAGAATGCTGGAGTTTCCTNTTTGAGCACACATGACTGTGTGCATGTGGAAAGCATAGTTGCCTGCTGGCGCAAGATTAACTTGCATGCAAGCAGGATGACACGTGNGATGAATGGGTGGTTGCATGCACCTTGGTGTTGTGCCAGATGGTTCCGCAGTTCACAGAATTACAAATTGGGCCCCCNTTTTCCNTGTCCGTTGATGAATTTTAGCTGGTCATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATNCAATCGCAGTATTGAAACCTCAAAAAAAA]
[+] EMBL BM421548 [GGAGGNTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAGACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTTACTCCCAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCANGTTGTTGGCTCGGAACCTCTGACTGGTTGATGGATGCCAAGTTGCAAGCTGCCACCTGGAACTGGAAGATGGGCATGGTGCCAGAATGCTGGAGTTTCCTNTTTGAGCACACATGACTGTGTGCATGTGGAAAGCATAGTTGCCTGCTGGCGCAAGATTAACTTGCATGCAAGCAGGATGACACGTGNGATGAATGGGTGGTTGCATGCACCTTGGTGTTGTGCCAGATGGTTCCGCAGTTCACAGAATTACAAATTGGGCCCCCNTTTTCCNTGTCCGTTGATGAATTTTAGCTGGTCATGACTTAGAGTGGCCTATTTTACCGTGAATTGTAATTAGCTAAAATNCAATCGCAGTATTGAAACCTCAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14629#0 TATACAAATACCAATCCACCCCTCCTCTCCTCCTCCTCCTTTTTCCTCCCCCTTCCGAAA 60
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 CGACGAAAAGCAACCGCCGAGGCGGAAGCGGGGAGAGGAGAATTCGCCGCCGCCGCCCCC 120
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 CGATCGGTGGAAGAACAACTAACAACTAGATTGATCCATCCCTGCGCCGCCGCCTCCGCC 180
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TGCCGTGGGGGCTCTCTCCGCTGTGGATGATAGGGAGGCTCGACGATGGGAGGGAAGAAG 240
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 GCCAAGACGGTTGAGAGGAATGACCACCGCCTGCTCTGCAGTGACGTGCTCACGGAGGTC 300
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TTCCACAGGCTGCCGGCGCGCACCCTCGCGTCGTGCAGGCTTGTCTGCAAGTCATGGATG 360
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TCGGAGCTCACCGATCCCCATTTCGTCCACGAGCACCTCAAGAGGAGCCAGCAGAAGCTC 420
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 CTGCTCTTTGCGAACGACAAGGCGAACGATAGGTCCCTCGCGATGGTGCTCGCCGACGAC 480
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 ACGGGGGCTACCTACCAGCTGACCAGGCCCATGGCTTCGAGGAGCCTCTTTGTGCACAAT 540
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TCTTGCAATGGCCTGCTCTGCCTAGGTGACAGCACAGGAGCCGTGCAGTTGCTCAACCCG 600
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 ACGACCGGCGAATCGGCTACTCTGCCGATGCCGATGTATACCGCAGGGAGCAGCCAGTTC 660
consensus_14629#1 ----------------------------------------------------GCCAGTTC 8
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTA 720
consensus_14629#1 TCGTCGTGTAATTGGCACTGCTTGGGGTTTTGCCCGTCTACGAAGGAGCACAAAGTGGTA 68
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 CATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATT 780
consensus_14629#1 CATTTCTACCTGGGAGCTCATTTTGATTCTTTCAATGTGTGCTGCGAGATATTCACTATT 128
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 GGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTG 840
consensus_14629#1 GGAGATAAATCCTGGAGACAGATTGGGAGTTTCCATGGAGCACCGACAGATAGAGGGGTG 188
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 CATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATC 900
consensus_14629#1 CATGTGAATGGAGCAGTGTACTATCTGACAAAGTTCCGTTACATTGCTTCGTCACGTATC 248
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 AATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTTCCCCCACGCAAGTCG 960
consensus_14629#1 AATTGTTTGAATCTTGAGAGCGAAAATTTTGATGTGATGATGCTTCCCCCACGCAAGTCG 308
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAG 1020
consensus_14629#1 TATGGAGGGCATTGCTCTTTGGCGGAGCTTGAGGGAAAGCTATGCTTGCTAGTTGTGGAG 368
consensus_14629#2 --------------------------------------------------------GGAG 4
****
consensus_14629#0 GGTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAG 1080
consensus_14629#1 GGTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAG 428
consensus_14629#2 GNTGGACATGATAATCCACCTCGTACAATGGACATATTGATGCTTGATAGTGGTGATAAG 64
* **********************************************************
consensus_14629#0 ACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTT 1140
consensus_14629#1 ACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTT 488
consensus_14629#2 ACAACCTGGACGCACAGATACCACATCTCATTGCCATGGTTGATGCCTTCATGTTATTTT 124
************************************************************
consensus_14629#0 ACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCAG-TTGTTGGCTCGGAA 1199
consensus_14629#1 ACTCCAAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCAG-TTGTTGGCTCGGAA 547
consensus_14629#2 ACTCCCAAACACACTTTGTTCCATGAGGGAAAAATTTGGGTTCANGTTGTTGGCTCGGAA 184
***** ************************************** **************
consensus_14629#0 CCTCT-ACTGTT--ATGAT--CCAAGTT-CAAGCT-CCACT--GAACTG-AAGATGG-CA 1248
consensus_14629#1 CCTCT-ACTGTT--ATGAT--CCAAGTT-CAAGCT-CCACT--GAACTG-AAGATGG-CA 596
consensus_14629#2 CCTCTGACTGGTTGATGGATGCCAAGTTGCAAGCTGCCACCTGGAACTGGAAGATGGGCA 244
***** **** * *** ******* ****** **** ****** ******* **
consensus_14629#0 TGT--CCAGAATCT--GAGTTTCCTTTT--AGCACACAT-ACTTT-----CATTGAAAGC 1296
consensus_14629#1 TGT--CCAGAATCT--GAGTTTCCTTTT--AGCACACAT-ACTTT-----CATTGAAAGC 644
consensus_14629#2 TGGTGCCAGAATGCTGGAGTTTCCTNTTTGAGCACACATGACTGTGTGCATGTGGAAAGC 304
** ******* ********* ** ********* *** * * ******
consensus_14629#0 ATAGTTCCTCT---GCGCAAAGATTACTT-CAT-CAAGCAG----ATACA-GTGAT-AAT 1345
consensus_14629#1 ATAGTTCCTCT---GCGCAAAGATTACTT-CAT-CAAGCAG----ATACA-GTGAT-AAT 693
consensus_14629#2 ATAGTTGCCTGCTGGCGCAAGATTAACTTGCATGCAAGCAGGATGACACGTGNGATGAAT 364
****** * ****** * **** *** ******* * ** * *** ***
consensus_14629#0 GG---------TGTTCATCACTTGTTTTCCAGATG-TTCCGCAGTTCACAGAATTACAAA 1395
consensus_14629#1 GG---------TGTTCATCACTTGTTTTCCAGATG-TTCCGCAGTTCACAGAATTACAAA 743
consensus_14629#2 GGGTGGTTGCATGCACCTTGGTGTTGTGCCAGATGGTTCCGCAGTTCACAGAATTACAAA 424
** ** * * * * * ******* ************************
consensus_14629#0 ATTGTGCCCCTTTTTCCTTTTCCGTTGATGAATTTTAGCTGGTCAATGACTTAGAGTGGC 1455
consensus_14629#1 ATTGTGCCCCTTTTTCCTTTTCAAAAAAAGGA---------------------------- 775
consensus_14629#2 TTGGGCCCCCNTTTTCCNTGTCCGTTGATGAATTTTAGCTGGTCATGACTTAGAGTGGCC 484
* * **** ****** * ** * * *
consensus_14629#0 CTATTTTACCGTGAATTGTAATTAGCTAAAATAAATGCAGTATTGAAACCTCCTTACAGC 1515
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 TATTTTACCGTGAATTGTAATTAGCTAAAATNCAATCGCAGTATTGAAACCTCAAAAAAA 544
consensus_14629#0 ACATGCTTGTCTGACTTCTAATTGATGTGCTTGTTTCTAACTTCCTATTATGATGCTAAA 1575
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 A----------------------------------------------------------- 545
consensus_14629#0 TTGATATGACGAGTTGAGAAAGAGAGGTTGTTCAGTTTTTACTTTACTTTGAATTATTGT 1635
consensus_14629#1 ------------------------------------------------------------
consensus_14629#2 ------------------------------------------------------------
consensus_14629#0 TGCCATTTTAGGTGACCTTTTTTACATAACAGTGAAGCATG 1676
consensus_14629#1 -----------------------------------------
consensus_14629#2 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||