cluster # 14631

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Oryza sativa
cluster # 14631 cluster # 14631 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14631#0 length = 767 sequences # 6

consensus_14631#1 length = 654 sequences # 9
consensus_14631#2 length = 542 sequences # 2

consensusID : consensus_14631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 767
fasta sequence

                              [TTTTTTTTTTTTTTACTCCAAAGTATACCCTGTATTCAGATTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGGGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCCCCCCTTGTCTCGTCCTCT]

[+] EMBL CA758965             [TTTTTTTTTTTTTTACTCCAAAGTATACCCTGTATTCAGATTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGCTGCCATTCTTCTTGTTCCTTCCAGGGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGGGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCCCCCCTTGTCTCGTCCTCT]
[+] EMBL CA758966             [TTTTTTTTTTTTTTACTCCAAAGTATACCCTGTATTCAGATTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGCTGCCATTCTTCTTGTTCCTTCCAGGGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGGGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCCCCCCTTGTCTCGTCCTCT]
[+] EMBL CF293930             [                           tttttttTTCAAATTTAAGTACACTGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGT                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF336422             [                                       tTTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTG                                                                                                    ]
[-] EMBL AU057245             [                                     tttTTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTtc                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF337923             [                                       tTTTAAGTACACAGCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_14631#0
TTTTTTTTTTTTTTACTCCAAAGTATACCCTGTATTCAGATTTAAGTACACAGCTCGACC
TGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTG
CAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTAC
CACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGG
TGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGA
GCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACT
TCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGC
ATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAAT
ACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAA
GTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCT
CCAGGTTTGGATGCCATGGTTGGGGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTG
AATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATAT
TGCTATCTATGCTCCTGAAGCTGAATTCCCCCCTTGTCTCGTCCTCT

consensusID : consensus_14631#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 654
fasta sequence

                              [GCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCAGAGTGGCAAGAAGAAGATGGAGCCCAAATAGTTAAGCCTAGGAAGAAAGACAGAACAGGGAAAGAAGAAAGAAAGAAA]

[+] EMBL CB661720             [GCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCAGAGTGGCAAGAAGAAGATGGAGCCCAAATAGTTAAGCCTAGGAAGAAAGACAGAACAGGGAAAGAAGAAAGAAAGAAA]
[-] EMBL CB661719             [ CTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCAGAGTGGCAAGAAGAAGATGGAGCCCAAATAGTTAAGCCTAGGAAGAAAGACAGAACAGGGAAAGAAGAAA        ]
[-] EMBL AK058224             [ CTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGC                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB683514             [ CTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAGCCCT                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB683432             [ CTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCAAGGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF298301             [             TATATTTATCTGAGTTTGGATCTCAAGCAGGGTACAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAG AATNATCATTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGT                                                                                                                                                                                                                             ]
[-] EMBL CF293929             [                                  CTCAAGCAGGGTGCAAATACACAAGTTCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTNTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAATTCAGAGTGGCAAGAAGAAGATGGA                                                         ]
[-] EMBL AU057244             [                                                                                                             TCTATAGCTAAGAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAG                                                                                                                           ]
[-] EMBL CF298300             [                                                                                                                              ACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATCGAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCTGAA                                                                                  ]




>consensus_14631#1
GCTCGACCTGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGT
TCTTTTTGCAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAA
GAAATTACCACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAA
GTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTC
CGGTGTGAGCCCTTCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCTTGGCAATC
GAAGCACTTCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAGTGCCCTTGCA
ACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCAC
TTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGG
TGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGAT
GCTATATTGCTATCTATGCTCCTGAAGCTGAATTCAGAGTGGCAAGAAGAAGATGGAGCC
CAAATAGTTAAGCCTAGGAAGAAAGACAGAACAGGGAAAGAAGAAAGAAAGAAA

consensusID : consensus_14631#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 542
fasta sequence

                              [GATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCCTTGGCAATCGAAAGCACTTCCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCANGT-GCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCGTTTGAAGGATTT]

[-] EMBL CF337922             [GATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGAGCCCTTCCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCCTTGGCAATCGAAAGCACTTCCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCANGT GCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCGTTTGAAGGATTT]
[-] EMBL CF336421             [                                                                                                                                                                    TTGCCATTCTTCTTGTTCCTTCCA GTGGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTGCCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCGTTTGAAGGATTT]




>consensus_14631#2
GATACTGGCATGCAAGTGCAGGGTGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCT
TTCACCTCTCTGCTCCGGTGTGAGCCCTTCCCTTGCCACAGCTAGGACAGCTCTTGAGCC
CAAACCCCTTGGCAATCGAAAGCACTTCCCATCTCTCGAATATGTTGCCATTCTTCTTGT
TCCTTCCANGTGCCCTTGCAACCTGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTG
CAACCGGCAGAGACCTGCAGTGCACAATACAGCTCATTCAGATTCAGAGAACATGTAGTG
CCAGCTGCTTCCCAAAAATTGAAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACT
GATCTTCAGTAAGACCTTCACTTTGGCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCT
CATCCTCCTCTTGATCTTGGGTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGT
GATCAGAGAAAGCTCCATGATGCTATATTGCTATCTATGCTCCTGAAGCGTTTGAAGGAT
TT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14631#0      TTTTTTTTTTTTTTACTCCAAAGTATACCCTGTATTCAGATTTAAGTACACAGCTCGACC 60
consensus_14631#2      ------------------------------------------------------------
consensus_14631#1      ----------------------------------------------------GCTCGACC 8
                                                                                   

consensus_14631#0      TGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTG 120
consensus_14631#2      ------------------------------------------------------------
consensus_14631#1      TGACATATATTTATCTGAGTTTGGATCTCAAGCAGGGTGCAAATACACAAGTTCTTTTTG 68
                                                                                   

consensus_14631#0      CAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTAC 180
consensus_14631#2      ------------------------------------------------------------
consensus_14631#1      CAACAGTTCACATACAGTACACAAGCTTGCACTCCATCTAATCTATAGCTAAGAAATTAC 128
                                                                                   

consensus_14631#0      CACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGG 240
consensus_14631#2      -------------------------------------GATACTGGCATGCAAGTGCAGGG 23
consensus_14631#1      CACTAGATAATTACATCAGAACAAGCTTAACCATAATGATACTGGCATGCAAGTGCAGGG 188
                                                            ***********************

consensus_14631#0      TGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGA 300
consensus_14631#2      TGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGA 83
consensus_14631#1      TGTCTGTATTGTTCTTGTCAATTAATTTGTTCTATCTTTCACCTCTCTGCTCCGGTGTGA 248
                       ************************************************************

consensus_14631#0      GCCCTTCC-TTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCC-TTGGCAATCGAA-GC 357
consensus_14631#2      GCCCTTCCCTTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCCCTTGGCAATCGAAAGC 143
consensus_14631#1      GCCCTTCC-TTGCCACAGCTAGGACAGCTCTTGAGCCCAAACCC-TTGGCAATCGAA-GC 305
                       ******** *********************************** ************ **

consensus_14631#0      ACTTCC-ATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAG-TGCCCTTGCAACC 415
consensus_14631#2      ACTTCCCATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCANGTGCCCTTGCAACC 203
consensus_14631#1      ACTTCC-ATCTCTCGAATATGTTGCCATTCTTCTTGTTCCTTCCAG-TGCCCTTGCAACC 363
                       ****** **************************************  *************

consensus_14631#0      TGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGC 475
consensus_14631#2      TGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTGCAGTGC 263
consensus_14631#1      TGGGCATTCTACAGCTCCCTTTCCTCTGCACGTCTTGCAACCGGCAGAGACCTTCAC--- 420
                       ***************************************************** **    

consensus_14631#0      ACAATACAGCTCATTCAGATTCAGAGAACATG--TAGTGCCAGCTGCTTCCCAAAAATTG 533
consensus_14631#2      ACAATACAGCTCATTCAGATTCAGAGAACATG--TAGTGCCAGCTGCTTCCCAAAAATTG 321
consensus_14631#1      ----TTTGGCTC---CAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTC-TTG 472
                           *   ****   *** **  **   ****  * ****** *  * ***      ***

consensus_14631#0      AAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCAC 593
consensus_14631#2      AAGAAAAGTTAGGAGCAAATGTAATTAGAAGCTAGTACTGATCTTCAGTAAGACCTTCAC 381
consensus_14631#1      ATCTTGGGT--GAAGTGAATGCTGCT----GCT-GCACCAGTTGCTGTGAAGGTGATCAG 525
                       *      **  * **  ****    *    *** * **   *       ***    *** 

consensus_14631#0      TTTG-GCTCCAGGTTTGGATGCCATGGTTGGGGCCATCCTCATCCTCCTCTTGATCTTGG 652
consensus_14631#2      TTTG-GCTCCAGGTTTGGATGCCATGGTTGGTGCCATCCTCATCCTCCTCTTGATCTTGG 440
consensus_14631#1      AGAAAGCTCCATGATGCTATATTGCTATCTATGC--TCCTGAAGCTGAATTCAGAGTGGC 583
                            ****** * *   **       *    **  **** *  **    *     * * 

consensus_14631#0      GTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGA 712
consensus_14631#2      GTGAAGTGAATGCTGCTGCTGCACCAGTTGCTGTGAAGGTGATCAGAGAAAGCTCCATGA 500
consensus_14631#1      AAGAAGAAGATGGAGCCCAAATAGTTAAGCCTAGGAAGAAAGACAGAACAGGGA--AAGA 641
                         ****   ***  **      *       **  ****     ****  * *    * **

consensus_14631#0      TGCTATATTGCTATCTATGCTCCTGAAGC---TGAATTCCCCCCTTGTCTCGTCCTCT 767
consensus_14631#2      TGCTATATTGCTATCTATGCTCCTGAAGCGTTTGAAGGATTT---------------- 542
consensus_14631#1      AGAAAGAAAGAAA--------------------------------------------- 654
                        *  * *  *  *