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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14644#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1564 fasta sequence
[TCGCAACACACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGCGAGCAAGAAGAAGCGGGGGCGGCACTTCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGGGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACT-CTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA-TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTGGTTTGTACAAAAA]
[+] EMBL AK101949 [TCGCAACACACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGCGAGCAAGAAGAAGCGGGGGCGGCACTTCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCTCGCCGTGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGAGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTGGTTT ]
[+] EMBL CA754482 [ AACACACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGCGAGCAAGAAGAAGCGGGGGCGGCACTTCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGNAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCA ]
[+] EMBL CB632140 [ GCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGGGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACT CTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAG ]
[-] EMBL CB632141 [ CCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGGGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACT CTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATG ]
[+] EMBL BE607437 [ GCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACT CTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTTGTTGTTAATGATGTCAAATAAGTTTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCA ]
[+] EMBL CA764935 [ GACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACT CTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCACTGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTTGTTGTTAATGATGTCAAATAAGTTTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTGG ]
[-] EMBL CB965374 [ CATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCCCTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTG ]
[+] EMBL AU173481 [ TCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCA TGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTGGTTTGTACAAAAA]
[-] EMBL AU165011 [ gCCGAAATATAAAGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATTTGTAATACTGCCGATCTTATGATCAAAACAATATAATAAGTTTAAGCACTCTTAATTTGTGGGCTACTTTTACGGGGTTTTCGTACTGCTGGTCAAATAGTCCAATGAAATCGATCATGTCGGCAAAATTGTCGTCAATTATCGTGGTCGTTGTTGTTAAGGATGTCAAATAAGTTTATGAAAACCGGGTCCTCTTGGTGTTTAGGTACCACTGATCGATCCATCATTTGATTTCTGTCATGTTGAGAGGGATCGTGTAAGAAAATCACAATTTGCTGGATTCAGTCCAGTCGCAATGTATTTTGGGTTGTACAAAAA]
consensusID : consensus_14644#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1230 fasta sequence
[TTCGCAACACACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACAC-TTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGC-GGCGAGCAAGAAGAAGCGGGGGCGGCACTTCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTACCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGAGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTAAGCATCTGAATTCACTTCCATTTTAATGGATTCAGTTAAAAACTTAAAATCCATCTGTTCATCAGGATTATATATCTTGATCAGATACCATGCCATTTCTT]
[+] EMBL AK060527 [TTCGCAACACACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACAC TTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGC GGCGAGCAAGAAGAAGCGGGGGCGGCACTTCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACAAGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACGACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCGCCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTACCACCGCCGGCGACAGCACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGAGAATTCTCGCCGCCTGCTGAGACCGCGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTAAGCATCTGAATTCACTTCCATTTTAATGGATTCAGTTAAAAACTTAAAATCCATCTGTTCATCAGGATTATATATCTTGATCAGATACCATGCCATTTCTT]
[+] EMBL OSR26941A [ CACACTTGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGNGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTNACCGCCAGCCACCTNTNGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAG ]
[+] EMBL AU070321 [ TGAAGAAAAAAAACACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACNCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACAC TTCGTGTTCGCGTCCAAATCTCGTGTCGTCG ]
[+] EMBL C74860 [ CACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTNGCCGGCCGGCTCCAAGAATNCCGCCCGCGG AAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGGCGAGCAAGAAGAA ]
[+] EMBL OSS11181A [ CACGACGAACACGTTAAAAAAAGGTCGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGTCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACAC TTCGTGTTCGCGTCCAAATnt ]
[+] EMBL CB656479 [ AACCGCGAACAATGTGTGGAGGCGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACTAAGGACAC TTCGTGTTCGCGTCCAAATCTCGTGTCGTC ]
consensusID : consensus_14644#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1193 fasta sequence
[CACTTGAAGAAAAAAAACACTGACGAACACTGTTAAAAAAAGGTCTGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCTGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGC----CGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGNCGGCGACAGCACCCGCCGCCGCCCCGCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCATGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTT]
[+] EMBL AU173480 [CACTTGAAGAAAAAAAACACTGACGAACACTGTTAAAAAAAGGTCTGAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCTGCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGC CGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGNCGGCGACAGCACCCGCCGCCGCCCCG ]
[+] EMBL AK060929 [ CAC GACGAACAC GTTAAAAAAAGGTC GAAGAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGC GCCATCCTCGCCGAGTTCATCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGCCGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCTTCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCGACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAGCACCCGCCGCCACCGGCCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCCCCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCAGCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCCCCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCGCGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACGGCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACGTCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCATGGCTTGCTTGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTACTGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACTTTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATATCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTGGTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGATGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14644#0 -TCGCAACACACACTTGAAGAAAAAAAACAC-GACGAACAC-GTTAAAAAAAGGTC-GAA 56
consensus_14644#2 -----------CACTTGAAGAAAAAAAACACTGACGAACACTGTTAAAAAAAGGTCTGAA 49
consensus_14644#1 TTCGCAACACACACTTGAAGAAAAAAAACAC-GACGAACAC-GTTAAAAAAAGGTC-GAA 57
******************** ********* ************** ***
consensus_14644#0 GAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGC-GCCATCCTCGCCGAGTTCA 115
consensus_14644#2 GAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGCTGCCATCCTCGCCGAGTTCA 109
consensus_14644#1 GAGAAGTGGGAGACCCAAACCGCGAACAATGTGTGGAGGC-GCCATCCTCGCCGAGTTCA 116
**************************************** *******************
consensus_14644#0 TCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGC 175
consensus_14644#2 TCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGC 169
consensus_14644#1 TCCCGGCGCCGTCGCGCGCCGCGGCGGCGACCAAGCGGGTGACCGCCAGCCACCTGTGGC 176
************************************************************
consensus_14644#0 CGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCT 235
consensus_14644#2 CGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCT 229
consensus_14644#1 CGGCCGGCTCCAAGAACGCCGCCCGCGGCAAGAGCAAGAGCAAGAGGCAGCAGAGGAGCT 236
************************************************************
consensus_14644#0 TCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCG 295
consensus_14644#2 TCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCG 289
consensus_14644#1 TCGCCGACGTCGACGACTTCGAGGCCGCCTTCGAGCAGTTCGACGATGACTCCGACTTCG 296
************************************************************
consensus_14644#0 ACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCG 355
consensus_14644#2 ACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCG 349
consensus_14644#1 ACGACGCGGAGGAAGAAGACGAAGGACACTTCGTGTTCGCGTCCAAATCTCGTGTCGTCG 356
************************************************************
consensus_14644#0 CCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGCGAGCAAGAAGAAGCGGGGGCGGCACT 415
consensus_14644#2 CCG--------------------------------------------------------- 352
consensus_14644#1 CCGGGCACGACGGGCGCGCGGCGGCGAGGGCGGCGAGCAAGAAGAAGCGGGGGCGGCACT 416
***
consensus_14644#0 TCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACA 475
consensus_14644#2 ------------------------------------------------------------
consensus_14644#1 TCCGAGGCATCCGGCAGCGGCCATGGGGGAAGTGGGCGGCGGAGATCCGCGACCCGCACA 476
consensus_14644#0 AGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACG 535
consensus_14644#2 ------------------------------------------------------------
consensus_14644#1 AGGGCACGCGCGTCTGGCTCGGCACGTTCAACACCCCGGAGGAGGCCGCACGCGCCTACG 536
consensus_14644#0 ACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCG 595
consensus_14644#2 ------------------------------------------------------------
consensus_14644#1 ACGTCGAGGCGCGCCGCCTCCGCGGCAGCAAGGCCAAGGTCAACTTCCCCGCCACGCCCG 596
consensus_14644#0 CCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGCCGGCGACAG 655
consensus_14644#2 ----------CCCACGCCGCGGCAACACGAGAGCCACCGCCGTGCCACCGNCGGCGACAG 402
consensus_14644#1 CCGCCGCGCGCCCACGCCGCGGCAACACGAGAGCCACCGCCGTACCACCGCCGGCGACAG 656
********************************* ****** *********
consensus_14644#0 CACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGGGAATTCTCGCCGCCTGCTGAGACCG 715
consensus_14644#2 CACCCGCCGCCGCCCCGC------------------------------------------ 420
consensus_14644#1 CACCCGCCGCCGCCCCGCCGCGCGGACTGAAGCGAGAATTCTCGCCGCCTGCTGAGACCG 716
******************
consensus_14644#0 CGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGG 775
consensus_14644#2 ------------------------------------------------------------
consensus_14644#1 CGCTACCTTTCTTCACCAACGGCTTCGTCGACCTGACGACCGCCGCGGCGCCGCCACCGG 776
consensus_14644#0 CCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCC 835
consensus_14644#2 --ATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCC 478
consensus_14644#1 CCATGATGATGACGAGCTCCTTCACCGACAGCGTCGCCACGTCGGAGTCCGGCGGGAGCC 836
**********************************************************
consensus_14644#0 CCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCA 895
consensus_14644#2 CCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCA 538
consensus_14644#1 CCGCCAAGAAGGCGAGGTCCGACGACGTCGACTCGTCCGAGGGCAGCGTCGGCGGCGGCA 896
************************************************************
consensus_14644#0 GCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCC 955
consensus_14644#2 GCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCC 598
consensus_14644#1 GCGACACGCTGGGTTTCACCGACGAGCTGGAGTTCGACCCGTTCATGCTGTTCCAGCTCC 956
************************************************************
consensus_14644#0 CCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCG 1015
consensus_14644#2 CCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCG 658
consensus_14644#1 CCTACTCCGACGGCTACGAGTCCATCGACAGCCTCTTCGCCGCCGGCGACGCCAACAGCG 1016
************************************************************
consensus_14644#0 CGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACG 1075
consensus_14644#2 CGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACG 718
consensus_14644#1 CGAACACCGACATGAACGCCGGCGTCAACCTGTGGAGCTTCGACGACTTCCCAATCGACG 1076
************************************************************
consensus_14644#0 GCGCCCTTTTCTGATGTACTC-TCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACG 1134
consensus_14644#2 GCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTTAATCACG 778
consensus_14644#1 GCGCCCTTTTCTGATGTACTCCTCCATTGATGCAGTTTGTGCACTCAATTGTAA---GCA 1133
********************* ****************************** * *
consensus_14644#0 TCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCATGGCTTGCT 1194
consensus_14644#2 TCGTCGTTGATGAATGTTTAACCGGAGGATGATGGGGTGCAGCTGATATCATGGCTTGCT 838
consensus_14644#1 TCTGAATTCACTTCCATTTTAATGGA-----------TTCAGTTAAAA---------ACT 1173
** ** * *** * *** * *** * * * **
consensus_14644#0 TGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTAC 1254
consensus_14644#2 TGATTACCGAATTATATTGCGGTGTTTGTGTTTGTCAATTAGATTCTGAATCTGTACTAC 898
consensus_14644#1 TAAA-ATCCATCTGT-TCATCAGGATTATATATCTTGATCAGATACCATGCCATTTCTT- 1230
* * * * * * * * * ** * * * * ** **** * * * **
consensus_14644#0 TGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACT 1314
consensus_14644#2 TGCCGATCTTATGATCAAAACTATATATTAAGTTTATGTACTCTTAATTTGTGGGCTACT 958
consensus_14644#1 ------------------------------------------------------------
consensus_14644#0 TTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATA 1374
consensus_14644#2 TTTACGGGGTCTTCGTACTGCTGGTCAAATAGTCCTATGAAATCGATCATGTCGGCAATA 1018
consensus_14644#1 ------------------------------------------------------------
consensus_14644#0 TCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTG 1434
consensus_14644#2 TCGTCGTCAATTATCGTGGTCGTGGTTGTTAATGATGTCAAATAAGTCTATGAAAACCTG 1078
consensus_14644#1 ------------------------------------------------------------
consensus_14644#0 GTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGA 1494
consensus_14644#2 GTCCTCTTGGTGTTTATGTACCACTGATCGATCCATCATTTGATCTCTGTCATGTTGAGA 1138
consensus_14644#1 ------------------------------------------------------------
consensus_14644#0 TGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTTTGGTT 1554
consensus_14644#2 TGGATCGTGTAAGAATATCATAATTTGCTGGATTCAGTCCAGTCGTAATGTATTT----- 1193
consensus_14644#1 ------------------------------------------------------------
consensus_14644#0 TGTACAAAAA 1564
consensus_14644#2 ----------
consensus_14644#1 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||