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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1631 fasta sequence
[AGAGAAGAGCTAGGGTTTCATCTCATCTCCAGCCATGGNGTCCGCCGCCTCCCCGCCGCGCTCCGGCGACGCCTCCCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCCGACCGCCGCAGCGGCGAGGCGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT---CAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT-GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT-CCCCTGCAATCAT-CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT-CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA-TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA-GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGACGTACATTCTACCCCTTTGGTGCTTGATACCCTTGTCTGCATCCTGTTGAAGCCAATTTTGCACTTTGTTCGATGATGTTTAAGCGACACGCTGGAAATTAGAAAGGCAGAGTATGACGGTAAGCACGCAGCCTTAATCTTTC]
[+] EMBL C71759 [AGAGAAGAGCTAGGGTTTCATCTCATCTCCAGCCATGGNGTCCGCCGCCTCCCCGCCGCGCTCCGGCGACGCCTCCCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCCGACCGCCGCAGCGGCGAGGCGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTNATGCGGGAGNCGTCGGTGGCGGTGCGGGAAACGACGGCGGA NACCTCGAGGAGCGCCAG ]
[+] EMBL AK067630 [ TTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT CAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGACGTA ]
[+] EMBL CB665664 [ TTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCACGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGGCTTCTGTGTTGCCTTGGCCTGTGTGATTGGGATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAA ]
[+] EMBL AU172715 [ TTCCGGGGCTGCGCGGCGCGGCGCGGTTCCTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACGGCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTNTGGCTCGCC ]
[+] EMBL CB668723 [ ACCGTATGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTCCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT CAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTAC ]
[+] EMBL CB663474 [ CTGGGCCTACTCCAAGCCCGTCGTCGTGCTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCGCTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGCCTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGCGGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGAGTCCGCAAACACGATGTTTTCTTTCATAGGGTGGATCATTGGGTTCTACTGGATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT CAGGAAGGAGCATCTGAAGATGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTG ]
[+] EMBL CA764367 [ TGATGGGGATTTCAAGCTCAGTATTGTGAAGCACCTGGGGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGGACATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTCCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGATCAGCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT CACAGGACGAGCAATCTGGTGAANGATCGATATGCTCCAGTTGCGNTCNTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGGTTTANCAGTTTCTTGATGCCCGGAAANNAGNACATTTCCTT TCTCTAAGACAATGGGGGCGCAAATT TCANTTTANCCCTGTAGGAAAANTTTGCATTGAGGATTCTCATGacngtgggn ]
[-] EMBL CB635936 [ GGCTCTCCATTGTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGATCAGCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGCATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAAGAAATACATGGAAATGCA GAGGTT ]
[-] EMBL CB663475 [ AGTCTTCTGTGTTGCCTTGGCCTGTGTGATTGGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT CAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTTTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTTTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTT ]
[-] EMBL CB665665 [ CTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGATCAGCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGACGTACATTCTACCCCTTTGGTGCTTG ]
[-] EMBL CB668722 [ CTGTAACTGAT CAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGAC ]
[-] EMBL CB665753 [ AACTGATCAGCAGGAAGGAGCATCTGAAGAGGACATCAACAACCTGTCCAAATTCAAATTTCGGACAATGGGTGATGCAGACAAGCTGGTTGCTGGAATTGCAGCACCTGTGGGTGGAGTAATGACTGAGTGTGGCACCAATCCTCCTGTTGAACACTTCCTTTCTGCTGAGGAT GCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACT CCCCTGCAATCAT CATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTTTAGGTTT CACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTTTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGACGTACATTCTACCCCTTTGGTGCTTG ]
[+] EMBL C98472 [ TGCTGAGGATGGCTGAGTGCTGCATCTGCTTGTGTCCCTATGAAGACGGTGCGGAACTTCGAGAACTCCCCCTGCAATCATCCATTTCCACTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTTCCACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGAATTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCAaaaaa ]
[-] EMBL CB964537 [ TAGGTTT CACAGGACGAGCCATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCCGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCCATTGTGTCGCAGATTCTCATTTTACCCTTGTAGGAAGTATTTGCCTTGAGGATTCTCATGTACGTTGTGTTAGCCAGTGTTGAATAAATACATGGAAATGCACGAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCCGTAGACGCACCTTCTACCCCTTTGGTGCTTGATACCCTTGTCTGCATCCTGTTGAAGCCAATTTTGCACTTTGTTCGATGATGTTTAAGCGACACGCTGGAAATTAGAAAGGCAGAGTATGACGGTAAGCACGCAGCCTTAATCTTTC]
[+] EMBL AU069790 [ TAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGANTGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACA TTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCATTTTAGCCTTGTAGGAAGTATTTGANTTGAGGATTCTCATGTACGTTGTGTTAGCAAGTGTTGAATAAATACATGGAAATGCA GAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATGCAGTAGACGTACATTCTAaaaa ]
consensusID : consensus_14653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 749 fasta sequence
[ATCTGACAACCGGTCCAAAAGTGCAAATGTTCGGACAATGGGTGGATGCAGAGACCAANTGGTTGTCTGGAATGTGCAGCACCTGTGTGGTTGGAGTAAATGACTGAGTGTTGGCANCCAATCCTCCCTGGTTGGAACCACNTCCTTTCNCTGAGGATTCTGAGTGCNNGCATCTGCTTGTGTCCCCTATGAAGACGGTCGGAACTTCGAGAACTCCCCGTGCAATCATCAGTGTTCCACGTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTTCACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACATTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCACTTTTAGCCCTTGTAGGAAGTATTTGCACTTGAGGATTCTCATGTACGTTGTGTTAGCCAAGTGTTGAATAAATACCACTGGAAATGCCAGAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATCAGTAGACGCACATTCTACCCCTTTGGGTGCTTTAAAAAAAAAA]
[+] EMBL BQ907014 [ATCTGACAACCGGTCCAAAAGTGCAAATGTTCGGACAATGGGTGGATGCAGAGACCAANTGGTTGTCTGGAATGTGCAGCACCTGTGTGGTTGGAGTAAATGACTGAGTGTTGGCANCCAATCCTCCCTGGTTGGAACCACNTCCTTTCNCTGAGGATTCTGAGTGCNNGCATCTGCTTGTGTCCCCTATGAAGACGGTCGGAACTTCGAGAACTCCCCGTGCAATCATCAGTGTTCCACGTGTACCTGCATAGACAAGTGGCTTCACATAAATGCAACATGTCCCCTGTGCAAGTTCAACATCATCAAGAGCAACCTTGGTCCAGAAGACGTCTAGGTTTCACAGGACGAGCAATCTGTTGAAGGATTGATATGCTCCAGTTGCGTTCTTTAGCTATGGGTTCCTTCAGGTGTAAGTATGGGGTATAGGTGATGCACAGCTGGTTGATCAGTATTCGCTCCTGAATGAAATGTTTTAGCAGTTTCTTGATGCCGGTAGAGATGTACATTCCTTCTCTCTAAGTCAATTGTGTCGCAGATTCTCACTTTTAGCCCTTGTAGGAAGTATTTGCACTTGAGGATTCTCATGTACGTTGTGTTAGCCAAGTGTTGAATAAATACCACTGGAAATGCCAGAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACATGCTGTCTCCTTAATATCAGTAGACGCACATTCTACCCCTTTGGGTGCTTTAAAAAAAAAA]
consensusID : consensus_14653#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence
[ATTTCCCCTGTACCTGCCACTAGACCACACGTGGCTTCACATAAATGCAACATGTCCCCTGTGCCAAGTTCAACATCATCCACAGAGCAACCCTTGGTCCAGAAGACGTTCTAGGTTTCACCAGGACCGAGCAATCTGTTGAAGGATTGATATGCTCCACGTTGCGTTCTTTAGCTATCGGGTTCCTTCCAGGTGTAAGTATGGGGTATAGGTGATGCACNCACGCTGGTTGATCACGTATTCGCTCCTGAATGAAATGTTCTTAGCCACGGTTTCTTGATGCCGGTAGAGATGTACACTTCCTTCTCTCTAAGTCACATTGTGTCGCCAGATTCTCACTTTTAGCCCTTGTAGGAAGTAATTTGCACTTGAGCGATTCTCACTGTACGCTTGTGTTAGCCACAGCTGTTGAATAAATACCACTGGAAATGCCACGAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACCATGCTGTCTCCTTAATATCAGTAGACGCACATTCTAAAAAAAAAA]
[+] EMBL BQ906040 [ATTTCCCCTGTACCTGCCACTAGACCACACGTGGCTTCACATAAATGCAACATGTCCCCTGTGCCAAGTTCAACATCATCCACAGAGCAACCCTTGGTCCAGAAGACGTTCTAGGTTTCACCAGGACCGAGCAATCTGTTGAAGGATTGATATGCTCCACGTTGCGTTCTTTAGCTATCGGGTTCCTTCCAGGTGTAAGTATGGGGTATAGGTGATGCACNCACGCTGGTTGATCACGTATTCGCTCCTGAATGAAATGTTCTTAGCCACGGTTTCTTGATGCCGGTAGAGATGTACACTTCCTTCTCTCTAAGTCACATTGTGTCGCCAGATTCTCACTTTTAGCCCTTGTAGGAAGTAATTTGCACTTGAGCGATTCTCACTGTACGCTTGTGTTAGCCACAGCTGTTGAATAAATACCACTGGAAATGCCACGAGGTTTGTAAGAAGAAAAATGGTTGTGGAATTGGAGCTTTGTTAACAGCACCATGCTGTCTCCTTAATATCAGTAGACGCACATTCTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14653#0 AGAGAAGAGCTAGGGTTTCATCTCATCTCCAGCCATGGNGTCCGCCGCCTCCCCGCCGCG 60
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CTCCGGCGACGCCTCCCCGTCCTCCCCTCTCCTCCCTTCCCCGACGTCCCCCGACCGCCG 120
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CAGCGGCGAGGCGGAGGCGGAGGACGCCTGCTTCCGGGGCTGCGCGGCGCGGCGCGGTTC 180
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CTGGGCCGCACGGGGAGCCGCCGCCTGATGCGGGAGCCGTCGGTGGCGGTGCGGGAGACG 240
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 GCGGCGGAGCACCTCGAGGAGCGCCAGACCGACTGGGCCTACTCCAAGCCCGTCGTCGTG 300
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CTCGACGTGCTCTGGAACCTCGCCTTCGTCGCCGTCGCCGCCGCCGTCCTCGCCGCCTCG 360
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CTCCCGGAGTCCCCCTCGGTGCCGCTCCGCGTCTGGCTCGCCGGGTACGTGCTCCAGTGC 420
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CTCTTCCACGTCCTCTGCGTCACCGTCGAGTACAGGCGGCGCCGGGAGGCGCGCGGCGGC 480
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 GGCTTTGGGGCGGACCAGGGGGCTGCGGCTGATGGGGATTTCAAGCTCAGTATTGTGAAG 540
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CACCTGGAGTCCGCAAACACGATGTTTTCTTTCATATGGTGGATCATTGGGTTCTACTGG 600
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 ATATCTGCAGGTGGCCAAGCTTTGTCCCATGATGCTCCTCAACTTTACTGGCTCTCCATT 660
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 GTGTTTCTGGCATTTGATGTTTTCTTTGTAGTCTTCTGTGTTGCCTTGGCCTGTGTGATT 720
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 GGCATTGCTGTCTGTTGCTGCCTGCCTTGCATTATTGCTATCTTATATGCTGTAACTGAT 780
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CAGGAAGGAGCATCTGAAGAGGACATC-AACAACCTGTCCAAA--TTCAAAT-TTCGGAC 836
consensus_14653#1 ------------------------ATCTGACAACCGGTCCAAAAGTGCAAATGTTCGGAC 36
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 AATGGGTG-ATGCAGACA--AGCTGGTTG-CTGGAAT-TGCAGCACCTGTGGG--TGGAG 889
consensus_14653#1 AATGGGTGGATGCAGAGACCAANTGGTTGTCTGGAATGTGCAGCACCTGTGTGGTTGGAG 96
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 TAA-TGACTGAGTGT-GGCACC-AATCCTCCT--GTTGAA--CACTTCCTTTCTGCTGAG 942
consensus_14653#1 TAAATGACTGAGTGTTGGCANCCAATCCTCCCTGGTTGGAACCACNTCCTTTCN-CTGAG 155
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 GATGCTGAGTGCTG-CATCTGCTTGTGTCCC-TATGAAGACGGTGCGGAACTTCGAGAAC 1000
consensus_14653#1 GATTCTGAGTGCNNGCATCTGCTTGTGTCCCCTATGAAGACGGT-CGGAACTTCGAGAAC 214
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 TCCCC-TGCAATCATCATT--TCCAC-TGTACCTGCATAGACAAGTGGCTTCACATAAAT 1056
consensus_14653#1 TCCCCGTGCAATCATCAGTGTTCCACGTGTACCTGCATAGACAAGTGGCTTCACATAAAT 274
consensus_14653#2 -------------ATTTCCCCTGTACCTGCCACTAGACC-ACACGTGGCTTCACATAAAT 46
** * ** ** ** * *** ****************
consensus_14653#0 GCAACATGTCCCCTGTGC-AAGTTCAACATCATCAA--GAGCAACC-TTGGTCCAGAAGA 1112
consensus_14653#1 GCAACATGTCCCCTGTGC-AAGTTCAACATCATCAA--GAGCAACC-TTGGTCCAGAAGA 330
consensus_14653#2 GCAACATGTCCCCTGTGCCAAGTTCAACATCATCCACAGAGCAACCCTTGGTCCAGAAGA 106
****************** *************** * ******** *************
consensus_14653#0 CGT-CTAGGTTTCAC-AGGAC-GAGCAATCTGTTGAAGGATTGATATGCTCCA-GTTGCG 1168
consensus_14653#1 CGT-CTAGGTTTCAC-AGGAC-GAGCAATCTGTTGAAGGATTGATATGCTCCA-GTTGCG 386
consensus_14653#2 CGTTCTAGGTTTCACCAGGACCGAGCAATCTGTTGAAGGATTGATATGCTCCACGTTGCG 166
*** *********** ***** ******************************* ******
consensus_14653#0 TTCTTTAGCTAT-GGGTTCCTTC-AGGTGTAAGTATGGGGTATAGGTGATGCACA---GC 1223
consensus_14653#1 TTCTTTAGCTAT-GGGTTCCTTC-AGGTGTAAGTATGGGGTATAGGTGATGCACA---GC 441
consensus_14653#2 TTCTTTAGCTATCGGGTTCCTTCCAGGTGTAAGTATGGGGTATAGGTGATGCACNCACGC 226
************ ********** ****************************** **
consensus_14653#0 TGGTTGATCA-GTATTCGCTCCTGAATGAAATGTT-TTAGC---AGTTTCTTGATGCCGG 1278
consensus_14653#1 TGGTTGATCA-GTATTCGCTCCTGAATGAAATGTT-TTAGC---AGTTTCTTGATGCCGG 496
consensus_14653#2 TGGTTGATCACGTATTCGCTCCTGAATGAAATGTTCTTAGCCACGGTTTCTTGATGCCGG 286
********** ************************ ***** ***************
consensus_14653#0 TAGAGATGTACA-TTCCTTCTCTCTAAGTCA-ATTGTGTCGC-AGATTCTCA-TTTTAGC 1334
consensus_14653#1 TAGAGATGTACA-TTCCTTCTCTCTAAGTCA-ATTGTGTCGC-AGATTCTCACTTTTAGC 553
consensus_14653#2 TAGAGATGTACACTTCCTTCTCTCTAAGTCACATTGTGTCGCCAGATTCTCACTTTTAGC 346
************ ****************** ********** ********* *******
consensus_14653#0 C-TTGTAGGAAGTA-TTTGAA-TTGAG-GATTCTCA-TGTACG-TTGTGTTAGC---AAG 1385
consensus_14653#1 CCTTGTAGGAAGTA-TTTGCACTTGAG-GATTCTCA-TGTACG-TTGTGTTAGCC--AAG 607
consensus_14653#2 CCTTGTAGGAAGTAATTTGCACTTGAGCGATTCTCACTGTACGCTTGTGTTAGCCACAGC 406
* ************ **** * ***** ******** ****** ********** *
consensus_14653#0 TGTTGAATAAATACA--TGGAAATGC-A-GAGGTTTGTAAGAAGAAAAATGGTTGTGGAA 1441
consensus_14653#1 TGTTGAATAAATACCACTGGAAATGCCA-GAGGTTTGTAAGAAGAAAAATGGTTGTGGAA 666
consensus_14653#2 TGTTGAATAAATACCACTGGAAATGCCACGAGGTTTGTAAGAAGAAAAATGGTTGTGGAA 466
************** ********* * *******************************
consensus_14653#0 TTGGAGCTTTGTTAACAGCAC-ATGCTGTCTCCTTAATATGCAGTAGACGTACATTCTAC 1500
consensus_14653#1 TTGGAGCTTTGTTAACAGCAC-ATGCTGTCTCCTTAATAT-CAGTAGACGCACATTCTAC 724
consensus_14653#2 TTGGAGCTTTGTTAACAGCACCATGCTGTCTCCTTAATAT-CAGTAGACGCACATTCTAA 525
********************* ****************** ********* ********
consensus_14653#0 CCCTTTGG-TGCTTGATACCCTTGTCTGCATCCTGTTGAAGCCAATTTTGCACTTTGTTC 1559
consensus_14653#1 CCCTTTGGGTGCTTTAAAAAAAAAA----------------------------------- 749
consensus_14653#2 AAAAAAAA---------------------------------------------------- 533
consensus_14653#0 GATGATGTTTAAGCGACACGCTGGAAATTAGAAAGGCAGAGTATGACGGTAAGCACGCAG 1619
consensus_14653#1 ------------------------------------------------------------
consensus_14653#2 ------------------------------------------------------------
consensus_14653#0 CCTTAATCTTTC 1631
consensus_14653#1 ------------
consensus_14653#2 ------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||