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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14659#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2399 fasta sequence
[AGGATGATGCGGCGGAGGAGGAGGAGGATCTCGACCTGCCCACGGCGTTCGGGCAGCGGATCGCGGAGGGCGCGAGGGCGAGGCGGGAGGAGAGGGCGCGGGAGCGGGAGACGGCCGCGCGGCGCAGGCAGGCGTCGGGGGTGGCCTCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGGGGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGCTCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCCGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCATTCTTTACTAAGGAGAATTTGCCGCCTCCGCCTCCACCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAACGAGTTGCTGGCGATGCGCAGCGAGCAGGAGCAGGACGAGCAGCCTACGGTTGTGCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAACGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGAAGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGGAAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGTGCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGGGGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATTTGCTGCAGGGGGATCAAGCATATGACTTCTCAGGTGATGTTGAATCGATGGCTCCATATGCACAATTGGTTTGCGAGGTCATCCTACCCGCTGTGAGGATATCAGGAACCAATTCATGGGAGGCTAGGGATCCAGAACCAATGCTTCGGTTTCTTGAATCATGGGAACGGTTGCTGCCCCCTATCGTGCTCCAGTCAATATTGGAGCATGTCATAATGCCAAAGCTTTCAGCTGCAGTAGATTCTTGGGACCCACGCAGGGAGAAGGTACCAATCCATGTATGGGTGCATCCATGGTTGCCAATGCTAGGACAGAGGATAGATACCTTGTGCCATTCTATTCGATACAAACTGAGTAGTGTTCTCCATGTTTGGCAAGCTCACGATGCATCAGCCTATGCTGTGTTGTCTCCATGGAAGGATGTATTTGATGCCGCAAGCTGGGAAGACTTGATTGTGCGTTATATCGTACCAAAATTGAAAATGGCACTTCAAGAATTTCAGATCAACCCTGC-AAACCAGAAACTCGACCAGTTCAACTGGGTAATGATTTGGGCTTCTGCAATTCCAGTACACCATATGGTCCATATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCTTTTTCTTGCCATAGAATGAACAAATGATTTATTAACTATTAGTTATCACCATGACAATTG]
[+] EMBL AK073946 [AGGATGATGCGGCGGAGGAGGAGGAGGATCTCGACCTGCCCACGGCGTTCGGGCAGCGGATCGCGGAGGGCGCGAGGGCGAGGCGGGAGGAGAGGGCGCGGGAGCGGGAGACGGCCGCGCGGCGCAGGCAGGCGTCGGGGGTGGCCTCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGGGGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGCTCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCCGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCATTCTTTACTAAGGAGAATTTGCCGCCTCCGCCTCCACCGGCGCCCGCCAAGAAGGAACAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAACGAGTTGCTGGCGATGCGCAGCGAGCAGGAGCAGGACGAGCAGCCTACGGTTGTGCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAACGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGAAGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGGAAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGTGCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGGGGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATTTGCTGCAGGGGGATCAAGCATATGACTTCTCAGGTGATGTTGAATCGATGGCTCCATATGCACAATTGGTTTGCGAGGTCATCCTACCCGCTGTGAGGATATCAGGAACCAATTCATGGGAGGCTAGGGATCCAGAACCAATGCTTCGGTTTCTTGAATCATGGGAACGGTTGCTGCCCCCTATCGTGCTCCAGTCAATATTGGAGCATGTCATAATGCCAAAGCTTTCAGCTGCAGTAGATTCTTGGGACCCACGCAGGGAGAAGGTACCAATCCATGTATGGGTGCATCCATGGTTGCCAATGCTAGGACAGAGGATAGATACCTTGTGCCATTCTATTCGATACAAACTGAGTAGTGTTCTCCATGTTTGGCAAGCTCACGATGCATCAGCCTATGCTGTGTTGTCTCCATGGAAGGATGTATTTGATGCCGCAAGCTGGGAAGACTTGATTGTGCGTTATATCGTACCAAAATTGAAAATGGCACTTCAAGAATTTCAGATCAACCCTGC AAACCAGAAACTCGACCAGTTCAACTGGGTAATGATTTGGGCTTCTGCAATTCCAGTACACCATATGGTCCATATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCT ]
[+] EMBL CB682317 [AGGATGATGCGGCGGAGGAGGAGGAGGATCTCGACCTGCCCACGGCGTTCGGGCAGCGGATCGCGGAGGGCGCGAGGGCGAGGCGGGAGGAGAGGGCGCGGGAGCGGGAGACGGCCGCGCGGCGCAGGCAGGCGTCGGGGGTGGCCTCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGGGGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGCTCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCCGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCATTCTTTACTAAGGAGAATTTGCCGCCTCCGCCTCCACCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAACAACGAGTTGCTGGCGATGCGCATCGAGCAGGAGCAGGAC ]
[+] EMBL CB635097 [ GAGGACAGGGCGCGGGAGCGGGAGACGGCCGCGCGGCGCAGGCAGGCGTCGGGGGTGGCCGCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGGGGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGCTCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCTGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCCTTCTTTACCAAGGAGAATTTGCCGCCTCCGCCTCCGCCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAATGAGTTGCTTGCGATGCGCAGCGAGCAGGAGCAGGATGAGCAGCCTACAGTTGTCCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAATGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTGGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAATGCCAACTACAAGTTATGGAGAAGATAGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCANGTGTTCTCTCTTTGGAAGGGTTGC ]
[+] EMBL CB635604 [ GAGGAGAGGGCGCGGGAGCGGGAGACGGCCGCGCGGCGCAGGCAGGCGTCGGGGGTGGCCGCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGGGGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGCTCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCTGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCCTTCTTTACCAAGGAGAATTTGCCGCCTCCGCCTCCGCCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAATGAGTTGCTTGCGATGCGCAGCGAGCAGGAGCAGGATGAGCAGCCTACAGTTGTCCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAATGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTGGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAATGCCAACTACAAGTTATGGAGAAGATAGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTGTTCTCTCTTTGGAAGGGTTGCTn ]
[+] EMBL CB666771 [ AGGTATACTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACGCCGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCATTCTTTACTAAGGAGAATTTGCCGCCTCCGCCTCCACCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGGCCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAACGAGTTGCTGGCGATGCGCAGCGAGCAGGAGCAGGACGAGCAGCCTACGGTTGTGCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAACGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGAAGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGGAAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGTGCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGGGGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATTTGCTGCAGGGGGATCAAGCATATGACTTCTCANGTGATGT ]
[+] EMBL CB668625 [ GTTGTGCAGAAGGTGATCGACATGCGAGGGCCTCAGGCACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAACGATGTGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGAAGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGGAAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGTGCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGGGGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATTTGCTGCAGGGGGATCAAGCATATGACTTCTCAGGTGATGTTGAATCGATGGCTCCATATGCACAATTGGTTTGCGAGGTCATCCTACCCGCTGTGAGGATATCAGGAACCAATTCATGGGAGGCTAGGGATCCAGAACCAATGCTTCGGTTTCTTGAATCATGGGAACGGTTGCTGCCCCCTATCGTGCTCCAGTCAATATTGGAGCATGTCATAATGCCAAAGCTTTCAGCTGCAGTAGATTCTTGGGAACCACGCACGGAGAAAGTACCAATCCATGTATGGGTGCATCCATGGT ]
[+] EMBL CA998309 [ GTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATATTGTGAGGCTGGATGGGCAGCTGCAACGGGAGCAGGATAAGGTGGCAAGCTTGGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAATGCCAACTA ]
[+] EMBL CB656509 [ AGGCTGATATTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGGAGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGAAGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGGAAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGTGCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGGGGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATTTGCTGCAGGGGGATCAAGCATATGACTTCTCAGGTGATGTTGAATCGATGGCTCCATATGCACAATTGGTTTGCGAGGTCATCCTACCCGCTGTGAGGATATCAGGAACCAATTCATGGGAGGCTAGGGATCCAGAACCAATGCTTCGGTTTCTTGAATCATGGGAACGGTTGCTGCCCCCTATCGTGCTCCAGTCAATATTGGAGCATGTCATAATGCCAAAGCTTTCAGCTGCAGTAGATTCTTGGGACCCACGCAGGGAGAAGGTACCAATCCATGTATGGGTGCATCCATGGTTGCCAATGCTAGGACAGAGGATAGATACCTTGTGCCATTCTATTCGATACAAACTGAGTAGTGTTCTCCATGTTTGGCAAGCTCACGATGCATCAGCCTATGC ]
[-] EMBL CB635605 [ CAGATCAACCCTGC AAACCAGAAACTCGATCAGTTCAACTGGGTAATGATTTGGGCTTCTGCAATCCCAGTACACCATATGGTCCATATGTTGGAAGTCGATTTCTTCAGCAAGTGGCAGCAGGTCCTCTACCATTGGCTGTGTTCACCAAGTCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTTCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAACGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACACGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATTTGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAACGGTATGCCAGTGTATGAGTTTGGCACCGTGAGTATTTGCATTGACTCTGTGAAGCGCCTACTCTATGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAATAGATCATCCTATTGTGTACAAGTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATCTTTCTCAAGAGCAGATGGTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGTATTTATATTCATGCTTTAATAaaaaaaaga ]
[-] EMBL CB666772 [ TCAACCTTGCAAAACCAGAAACTCGACCAGTTCAACTGGGTAATGATTTGGGCTTCTGCAATTCCAGTACACCATATGGTCCATATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATAAAAGGGCTTTAATATGCNCCGTG ]
[-] EMBL CB668626 [ ACACCATATGGTCCATATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCTTTTTCTTGCCATAGAATGAACAAAAGGTTTATTAACTATTAGTTATCACCATGACAATT ]
[-] EMBL CB682318 [ TATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCTTTTTCTTGCCATAGAAAGGGCAAATGATTTATTAACTATTAGTTATCACCAaaaaaaaag]
[-] EMBL CB656510 [ ATGTTGGAAGTAGATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATTTCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTGCCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCTTTTGCTTGCCATAGAATGAACAAATGATTTATTGACTAaaaaga ]
[-] EMBL CB661150 [ TGGCCTTGACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCCCCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCCCCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTTTACGCCCAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTAGGGCCTAGTAACTTTGTAGTATTTATATTCAGGCTTTAAAAGGCCCCGTGGTCCCTT ]
[+] EMBL CB661149 [ GACATGATGAACCGAGCTGCTGAAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAGAGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGCCAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACCAAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGTTTGGCACCGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCAAGAAGGAATTGAGAGATGGAGTGCTGTCTCTCTTACACAATTGATAGAAATGAACCGGAAGGCGAGGCAACGCTAGTTGATCATCCTATTGTGTACTATTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATGGTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAGTATTTATATTCATGCTTTAATATGCACCGTGGTGCCT ]
consensusID : consensus_14659#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 445 fasta sequence
[TTATCGGCANAATTGGGATCCAAAGGGCTTTTGATTGTGTGTGTTATTGCACACAAGGATGTTTGGGTTAGTAAATGTCGTACNAAAACTGGTATTGCCAATGTGTATGGAGTGTGTGGGCACCCAGTGGAGTNATTGTCGCAATTGACTCTGGTGAAGCGCCTGACTGCTGATGGCACCATACTTGCAAGAAGGAATTGGAGAGATGGGAGTGCTGTTCTCTGCTGTGACCCAAATTGGATGAGAAATGCNCNCCCGGAAGGCGAGGCAACGCTAATAGATCATGCCTATTGGTGTGACCAAGTGATCTATAAAGGGTGTCCAGTTTTGATCATCATNGTAGAATCTTTCTCAAGACAGATGGTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGCTATTTATATTCANGCTTTAATAAAAAAAAAA]
[+] EMBL BM420362 [TTATCGGCANAATTGGGATCCAAAGGGCTTTTGATTGTGTGTGTTATTGCACACAAGGATGTTTGGGTTAGTAAATGTCGTACNAAAACTGGTATTGCCAATGTGTATGGAGTGTGTGGGCACCCAGTGGAGTNATTGTCGCAATTGACTCTGGTGAAGCGCCTGACTGCTGATGGCACCATACTTGCAAGAAGGAATTGGAGAGATGGGAGTGCTGTTCTCTGCTGTGACCCAAATTGGATGAGAAATGCNCNCCCGGAAGGCGAGGCAACGCTAATAGATCATGCCTATTGGTGTGACCAAGTGATCTATAAAGGGTGTCCAGTTTTGATCATCATNGTAGAATCTTTCTCAAGACAGATGGTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGCTATTTATATTCANGCTTTAATAAAAAAAAAA]
consensusID : consensus_14659#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[ATGGCACAGTGTTATGGATGTTTGTGGGCACACCGTGGAAGTGAATATTGGCCATTGGAATCTTTCTGTTGGAAGCGCCTACTCTTCTTANTGCACCAACCTTTCACAGAAAGGGAATTTGAGAGATTGGATGTGCCTGTTCTTCTCGTTACGACACANTTGATACGAAATTGAACCGGAACGGCGAGGCAACGCCGTAATAGAGTCATCCTTAGTTGTGTACCACAGTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATCTTTCTCAAGAGCAGATGGTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGTATTTATATTCATGCTTTAATATGCACTGTGGTGCCATTTTTCTTGCCAAAAAA]
[+] EMBL BQ908826 [ATGGCACAGTGTTATGGATGTTTGTGGGCACACCGTGGAAGTGAATATTGGCCATTGGAATCTTTCTGTTGGAAGCGCCTACTCTTCTTANTGCACCAACCTTTCACAGAAAGGGAATTTGAGAGATTGGATGTGCCTGTTCTTCTCGTTACGACACANTTGATACGAAATTGAACCGGAACGGCGAGGCAACGCCGTAATAGAGTCATCCTTAGTTGTGTACCACAGTACTAAAAGGTGTCAGTTTTGATCATCATTGTAGAATCTTTCTCAAGAGCAGATGGTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGTATTTATATTCATGCTTTAATATGCACTGTGGTGCCATTTTTCTTGCCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGGATGATGCGGCGGAGGAGGAGGAGGATCTCGACCTGCCCACGGCGTTCGGGCAGCGGA 60
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TCGCGGAGGGCGCGAGGGCGAGGCGGGAGGAGAGGGCGCGGGAGCGGGAGACGGCCGCGC 120
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 GGCGCAGGCAGGCGTCGGGGGTGGCCTCCGGGAAGCCGGCGCCGGCTCTGGGGAGCCTGG 180
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 GGTCCAACACGAAGGTGGCCAAGATGATGGCCATGATGGGGTACAAGGATGGGATGGGGC 240
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TCGGCAAGAACGAGCAAGGTATAGTCGCGCCGGTGGAGACCACTCTGCGCCCCAAGAACG 300
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CCGGTCTCGGAAGCGTCGAGGGGTTCAAGGAGCCCAAGCCATTCTTTACTAAGGAGAATT 360
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TGCCGCCTCCGCCTCCACCGGCGCCCGCCAAGAAGGAGCAGCAGAGGTGGTCGAAGAAGG 420
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CCGGTGCGAAGAAAGGCCCCGTGCTGACGAAGAACGAGTTGCTGGCGATGCGCAGCGAGC 480
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGGAGCAGGACGAGCAGCCTACGGTTGTGCAGAAGGTGATCGACATGCGAGGGCCTCAGG 540
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CACGCGTGCTAACGGACTTGAAGGGGCTCAACGTGGAGCAGGAGATGGAGGCGAACGATG 600
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TGCCGATGCCAGAGTTGCAATACAATGTGAGGCTGCTTGTCGATGAGGCCAAGGCTGATA 660
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TTGTGAGGCTGGATGGGCAGCTGCGACGGGAGCAGGAGAAGGTGGCAAGCTTAGTGCGGG 720
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGAAGGAGAAAGTGGCAAAACAGGAGGCTTTGCAGAAACGCCAACTACAAGTTATGGAGA 780
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGATTGCAGGAGTGCTGGAGCAGGTCCGAGTGGATGATACTGCAGGTATTCTCTCTCTGG 840
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AAGGGTTGCTTAAGACCTTTCAGGAATTGAAGGCATGCTACGTGGAGGAATTCAAGATGT 900
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 GCAGTGTTGCATGGATTGCCTGCCGGTTTGCTCATCCGCTACTAATCCGAGTCTTCCAGG 960
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 GGTGGCAACCACTGCAAAATCCGTTGTTTGGCTTGGAGATCATGTCATCATGGAAAGATT 1020
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TGCTGCAGGGGGATCAAGCATATGACTTCTCAGGTGATGTTGAATCGATGGCTCCATATG 1080
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CACAATTGGTTTGCGAGGTCATCCTACCCGCTGTGAGGATATCAGGAACCAATTCATGGG 1140
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGGCTAGGGATCCAGAACCAATGCTTCGGTTTCTTGAATCATGGGAACGGTTGCTGCCCC 1200
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CTATCGTGCTCCAGTCAATATTGGAGCATGTCATAATGCCAAAGCTTTCAGCTGCAGTAG 1260
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 ATTCTTGGGACCCACGCAGGGAGAAGGTACCAATCCATGTATGGGTGCATCCATGGTTGC 1320
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CAATGCTAGGACAGAGGATAGATACCTTGTGCCATTCTATTCGATACAAACTGAGTAGTG 1380
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TTCTCCATGTTTGGCAAGCTCACGATGCATCAGCCTATGCTGTGTTGTCTCCATGGAAGG 1440
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 ATGTATTTGATGCCGCAAGCTGGGAAGACTTGATTGTGCGTTATATCGTACCAAAATTGA 1500
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AAATGGCACTTCAAGAATTTCAGATCAACCCTGCAAACCAGAAACTCGACCAGTTCAACT 1560
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 GGGTAATGATTTGGGCTTCTGCAATTCCAGTACACCATATGGTCCATATGTTGGAAGTAG 1620
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 ATTTCTTCAGCAAGTGGCAGCAGGTCCTGTACCATTGGCTGTGTTCACCAAATCCTGATT 1680
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 TCAATGAAATCATGAACTGGTACAAGGGCTGGAAGGGCCTTTTCCCACCAGAATTGCTTG 1740
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CCAATGAGCGCATACGGATGCTTTTAACGGCTGGCCTTGACATGATGAACCGAGCTGCTG 1800
consensus_14659#1 ------------------------------------------------------------
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AAGGCCTTGAGGTGGTGCAACCTGGCGCTAGGGAAAATGTGGGCTACTTGAGAGCAACAG 1860
consensus_14659#1 --------------------------TTATCGGCANAATTGGGATCCAAAGGGCTTTTGA 34
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 AGAAGAGGCAATTTGATGCAGCACAGCAAGCATCACAATACATGACTCACCATGCGGTGC 1920
consensus_14659#1 TTGTGTGTGTTATTGCACACAAGGATGTTTGGGTTAGTAAAT-GTCGTACNAAAACTGGT 93
consensus_14659#2 ------------------------------------------------------------
consensus_14659#0 CAGGAGCAGCCATGGCGGATATGAGCTTTAAGGAGTCTATCCAGGCATATGCAATGGACC 1980
consensus_14659#1 ATTGC-CAATGTGTATG---GA-GTGTGTGGGCAC-CCAGTGG-A-GTNATTGTCG-CAA 144
consensus_14659#2 ATGGCACAGTGT-TATG---GATGTTTGTGGGCAC-ACCGTGG-AAGTGAATATTGGCCA 54
consensus_14659#0 AAGGCTTATTGTTTATGCCCAGAGTTGGTAAATTCTACAATGGTATGCCAGTGTATGAGT 2040
* ** * *** **** ** ** * * *** * * * * *
consensus_14659#1 TTGA-----CTCTGGTG-AAGCGCCTGA-CTGCTGATGGC--ACCATACTTGCA------ 189
consensus_14659#2 TTGGAATCTTTCTGTTGGAAGCGCCTACTCTTCTTANTGC--ACCAACCTTTCACA---G 109
consensus_14659#0 TTGGCAC--CGTAAGTATTTGCATCGACTCTGTGAAGCGCCTACTCTACGCACAACTTCA 2098
*** * ** * ** * ** ** * **
consensus_14659#1 AGAAGGAATTGGAGAGATGGGA-GTGC-TGTTCTCTGCTGTGACCCAAATTGGATGAGAA 247
consensus_14659#2 AAAGGGAATTTGAGAGATTGGATGTGCCTGTTCTTCTCGTTACGACACANTTGATACGAA 169
consensus_14659#0 AGAAGGAATT-GAGAGATGGAG------TGCTGTCTCTCTTA---CACAATTGATA-GAA 2147
* * ****** ******* * ** * * * ** * * *** ***
consensus_14659#1 ATGCNCNCCCGGAAGGCGAGGCAACGC--TAATAGA-TCATGCCTATTGGTGTGACCAAG 304
consensus_14659#2 AT-TGAACCGGAACGGCGAGGCAACGCCGTAATAGAGTCATCCTTAGTTGTGTACCACAG 228
consensus_14659#0 AT--GAACC-GGAAGGCGAGGCAACGC--TAGTTGA-TCAT-CCTATT-GTGTACT--AT 2197
** ** * * ************* ** * ** **** * ** * **** *
consensus_14659#1 TGATCTATAAAGGGTGTCCAGTTTTGATCATCATNGTAGAATCTTTCTCAAGA-CAGATG 363
consensus_14659#2 TACT----AAAAGGTGTC-AGTTTTGATCATCATTGTAGAATCTTTCTCAAGAGCAGATG 283
consensus_14659#0 TACT----AAAAGGTGTC-AGTTTTGATCATCATTGTAGAATATTTCTAAAGAGCAGATG 2252
* * *** ****** *************** ******* ***** **** ******
consensus_14659#1 GTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAGCTATTTATAT 423
consensus_14659#2 GTTTAATGATGTATCTGAACAGATTGTTGTTTGGCCTAGTAACTTCATAG-TATTTATAT 342
consensus_14659#0 GTTTAATGATGTATCTGAACAGGTTGTTGTTTGGCCTAGTAACTTTGTAG-TATTTATAT 2311
********************** ********************** *** *********
consensus_14659#1 TCANGCTTTAATAAAAAAAAAA-------------------------------------- 445
consensus_14659#2 TCATGCTTTAATATGCACTGTGGTGCCATTTTTCTTGCCAAAAAA--------------- 387
consensus_14659#0 TCATGCTTTAATATGCACCGTGGTGCC-TTTTTCTTGCCATAGAATGAACAAATGATTTA 2370
*** ********* *
consensus_14659#1 -----------------------------
consensus_14659#2 -----------------------------
consensus_14659#0 TTAACTATTAGTTATCACCATGACAATTG 2399
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||