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Oryza sativa
cluster # 1466 cluster # 1466       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1466#0 length = 1040 sequences # 2  

consensusID : consensus_1466#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1040
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGACTTTGCAATTCACCAGCAAACCACCAAGGCTCCCTCCTCTTCCTCTTCTATTCCTCAGTCATGAAGATCGCCGCTGCTCTCCTCGCTGCCACTGCCGCCGTCGCCCAGGCCTCGGATATCGACACACTCATCCTCGGCGGCAAGATCGTGCCTGTTGGCCAGAAGACGTACACGGTCGGTCTGCGCCAGACCGCCACGGGGGGTGCCATTTGCGGCGGATCGCTCATCACGCCCACGCACATCCTCACGGCCGGCCACTGCTCTGGTTTCATCTCGCACGCGTCTGTTGGTTCGCACTTCATTAGCGGTTCCGCTGATGGCGAGGTCATTCGCATCAAGAAGGACACGCGCCACCCCAAGTACATTGACGACCAAGTGCTCGTGTACGACTACGCCATCATGGAGCTGGAGAGGCCGGCCAAGGTGACGCCAGTGAAGCTTTTCTCGGCGGACTCGGAGACGTTCGTGGGCCAGAACGCCACGGTCATGGGCTGGGGCAGAACGGCAGCGGGTGGCTCGTCGTCTCGTGAGCTGTTGCGTGTGGACGTCGCTGTGCGTTCGGACAAGGACTGCAAGGCCGCCAAGATCCGTGGTCCCCCCGTTATGGAGAGCATGTTCTGCGCCGGTGGCATCCGCAACAAGGACTCGTGCCAGGGCGACTCGGGTGGTCCGCTCATCCTTGAGCAGGCGACTCGTGACGTGCTTATCGGTGTTGTGAGCTGGGGCGAGAGCTGCGGTCTTGCGAACAAGCCTGGTGTGTACTCGAAGGTGAACTTCCAGAAGGACTGGATCCTTGCGAACGCGCCTGGTGCTCAGTTCGTGTAAAGCTTTCTCGTGATGGAGTGAGCTTCACCGCTGTTGTTTCTCTGACAATTGCGGTGCGACTTTTGATCTCTGCCGCCGGACAGGGGCGGAGTTTTGCCGTTTAAAAATTATTGATGGAATTTTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK112119             [TTCCTCGAGCACTGTTGGCCTACTGGACTTTGCAATTCACCAGCAAACCACCAAGGCTCCCTCCTCTTCCTCTTCTATTCCTCAGTCATGAAGATCGCCGCTGCTCTCCTCGCTGCCACTGCCGCCGTCGCCCAGGCCTCGGATATCGACACACTCATCCTCGGCGGCAAGATCGTGCCTGTTGGCCAGAAGACGTACACGGTCGGTCTGCGCCAGACCGCCACGGGGGGTGCCATTTGCGGCGGATCGCTCATCACGCCCACGCACATCCTCACGGCCGGCCACTGCTCTGGTTTCATCTCGCACGCGTCTGTTGGTTCGCACTTCATTAGCGGTTCCGCTGATGGCGAGGTCATTCGCATCAAGAAGGACACGCGCCACCCCAAGTACATTGACGACCAAGTGCTCGTGTACGACTACGCCATCATGGAGCTGGAGAGGCCGGCCAAGGTGACGCCAGTGAAGCTTTTCTCGGCGGACTCGGAGACGTTCGTGGGCCAGAACGCCACGGTCATGGGCTGGGGCAGAACGGCAGCGGGTGGCTCGTCGTCTCGTGAGCTGTTGCGTGTGGACGTCGCTGTGCGTTCGGACAAGGACTGCAAGGCCGCCAAGATCCGTGGTCCCCCCGTTATGGAGAGCATGTTCTGCGCCGGTGGCATCCGCAACAAGGACTCGTGCCAGGGCGACTCGGGTGGTCCGCTCATCCTTGAGCAGGCGACTCGTGACGTGCTTATCGGTGTTGTGAGCTGGGGCGAGAGCTGCGGTCTTGCGAACAAGCCTGGTGTGTACTCGAAGGTGAACTTCCAGAAGGACTGGATCCTTGCGAACGCGCCTGGTGCTCAGTTCGTGTAAAGCTTTCTCGTGATGGAGTGAGCTTCACCGCTGTTGTTTCTCTGACAATTGCGGTGCGACTTTTGATCTCTGCCGCCGGACAGGGGCGGAGTTTTGCCGTTTAAAAATTATTGATGGAATTTTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK112005             [                                   TTCACCAGCAAACCACCAAGGCTCCCTCCTCTTCCTCTTCTATTCCTCAGTCATGAAGATCGCCGCTGCTCTCCTCGCTGCCACTGCCGCCGTCGCCCAGGCCTCGGATATCGACACACTCATCCTCGGCGGCAAGATCGTGCCTGTTGGCCAGAAGACGTACACGGTCGGTCTGCGCCAGACCGCCACGGGGGGTGCCATTTGCGGCGGATCGCTCATCACGCCCACGCACATCCTCACGGCCGGCCACTGCTCTGGTTTCATCTCGCACGCGTCTGTTGGTTCGCACTTCATTAGCGGTTCCGCTGATGGCGAGGTCATTCGTATCAAGAAGGACACGCGCCACCCCAAGTACATTGACGACCAAGTGCTCGTGTACGACTACGCCATCATGGAGCTGGAGAGGCCGGCCAAGGTGACGCCAGTGAAGTTTTTCTCGGCGGACTCGGAGACGTTCGTGGGCCAGAACGCCACGGTCATGGGCTGGGGCAGAACGGCAGCGGGTGGCTCGTCGTCTCGTGAGCTGTTGCGTGTGGACGTCGCTGTGCGTTCGGACAAGGACTGCAAGGCCGCCAAGATCCGTGGTCCCCCCGTTATGGAGAGCATGTTCTGCGCCGGTGGCATCCGCAACAAGGACTCGTGCCAGGGCGACTCGGGTGGTCCGCTCATCCTTGAGCAGGCGACTCGTGACGTGCTTATCGGTGTTGTGAGCTGGGGCGAGAGCTGCGGTCTTGCGAACAAGCCTGGTGTGTACTCGAAGGTGAACTTCCAGAAGGACTGGATCCTTGCGAACGCGCCTGGTGCTCAGTTCGTGTAAAGCTTTCTCGTGATGGAGTGAGCTTCACCGCTGTTGTTTCTCTGACAATTGCGGTGCGACTTTTGATCTCTGCCGCCGGACAGGGGCGGAGTTTTGCCGTTTAAAAATTATTGA                                                                          ]


>consensus_1466#0 TTCCTCGAGCACTGTTGGCCTACTGGACTTTGCAATTCACCAGCAAACCACCAAGGCTCC CTCCTCTTCCTCTTCTATTCCTCAGTCATGAAGATCGCCGCTGCTCTCCTCGCTGCCACT GCCGCCGTCGCCCAGGCCTCGGATATCGACACACTCATCCTCGGCGGCAAGATCGTGCCT GTTGGCCAGAAGACGTACACGGTCGGTCTGCGCCAGACCGCCACGGGGGGTGCCATTTGC GGCGGATCGCTCATCACGCCCACGCACATCCTCACGGCCGGCCACTGCTCTGGTTTCATC TCGCACGCGTCTGTTGGTTCGCACTTCATTAGCGGTTCCGCTGATGGCGAGGTCATTCGC ATCAAGAAGGACACGCGCCACCCCAAGTACATTGACGACCAAGTGCTCGTGTACGACTAC GCCATCATGGAGCTGGAGAGGCCGGCCAAGGTGACGCCAGTGAAGCTTTTCTCGGCGGAC TCGGAGACGTTCGTGGGCCAGAACGCCACGGTCATGGGCTGGGGCAGAACGGCAGCGGGT GGCTCGTCGTCTCGTGAGCTGTTGCGTGTGGACGTCGCTGTGCGTTCGGACAAGGACTGC AAGGCCGCCAAGATCCGTGGTCCCCCCGTTATGGAGAGCATGTTCTGCGCCGGTGGCATC CGCAACAAGGACTCGTGCCAGGGCGACTCGGGTGGTCCGCTCATCCTTGAGCAGGCGACT CGTGACGTGCTTATCGGTGTTGTGAGCTGGGGCGAGAGCTGCGGTCTTGCGAACAAGCCT GGTGTGTACTCGAAGGTGAACTTCCAGAAGGACTGGATCCTTGCGAACGCGCCTGGTGCT CAGTTCGTGTAAAGCTTTCTCGTGATGGAGTGAGCTTCACCGCTGTTGTTTCTCTGACAA TTGCGGTGCGACTTTTGATCTCTGCCGCCGGACAGGGGCGGAGTTTTGCCGTTTAAAAAT TATTGATGGAATTTTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAGGCCACAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)