cluster # 14665

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Oryza sativa
cluster # 14665 cluster # 14665 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14665#0 length = 1737 sequences # 12

consensus_14665#1 length = 1016 sequences # 5

consensusID : consensus_14665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1737
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAAGTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGT-GTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC-ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAA-CCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCCCCTTCAGCCTTTGCTCCGGACTTGACCAAATCAAACTGTGATGTTCTGAACCTCCTAATTGCTTCCACACTCTTCATCAAATTCTCCATTGCGCTACCATCATACAGCTTTGCACCATGCCCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACGCGGTACTCCTCCCCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCTTTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCTGGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGGATGGCTTCAAGGTACTGCATCCCCACGCACTTCATGTCCTGGGAGCCACGCGCGTAGATGCGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCCGACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCGGGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGCCCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGCTGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCCGACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCGGCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTTGCTCGCCATTGCGAGCAGG]

[-] EMBL CF310316             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAAGTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB644554             [                             TTTTATTTTTTAACAAGTGCATTCTGACACAGCATGCCCTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGT GTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF308759             [                               TTTTTTTTAAACAAGTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAGCGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGTGGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB656542             [                              tcTTTTTTTTAACAAGTGCATTCTGACACAGCATGCATTGCCTTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGT GTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB657688             [                                         ACAAGTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGT GTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAA CCCGTTGGTGTCGGTGTGCCAGCCTTTCAGTATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB683441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCATTGTGATCATGGAGCAATATCGGT GTGTTTGTCATT GAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAA CCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCCCCTTCAGCCTTTGCTCCGGACTTGACCAAATCAAACTGTGATGTTCTGAACCTCCTAATTGCTTCCACACTCTTCATCAAATTCTCCATTGCGCTACCATCATACAGCTTTGCACCATGCCCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACGCGGTACTCCTCCCCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCTTTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCTGGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGGATGGCTTCAAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BE607442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACC ATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAA CCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCCCCTTCAGCCTTTGCTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CF324172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCAATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAANCCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCCCCTTCAGCCTTTGCTCCGGACTTGACCAAATCAAACTGTGATGTTCTGAACCTCCTAATTGCTTCCACACTCTTCATCAAATTCTCCATTGCGCTACCATCATACAGCTTTGCACCATGCCCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACGCGGTACTCCTCCCCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCTTTGAACTCCTTTGATGCAACAAATGCTTCTATACCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB657687             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGCTTTGCACCATGCCCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACGCGGTACTCCTCCNCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCTTTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCTGGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGGATGGCTTCAAGGTACTGCATCCCCACGCACTTCATGTCCTGGGAGCCACGCGCGTAGATGCGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCCGACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCGGGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGCCCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGCTGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCCGACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCGGCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTTGCTCGCCATTGCGAGCAGG]
[-] EMBL CB644553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACACGCGGTACTCCTCCACAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCTTTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCTGGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGGATGGCTTCAAGGTACTGCATCCCCACGCACTTCATGTCCTGGGAGCCACGCGCGTAGATGCGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCCGACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCGGGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGCCCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGCTGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCCGACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCGGCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTTGCTCGCCGTTGCGA     ]
[-] EMBL BP184667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGCGTAGATGCGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCCGACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCGGGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGCCCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGCTGCGCCGTGTCGATGCGGAGGTACT                                                                                                                                                        ]
[-] EMBL C26375               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGAAGTTGAGAAGCAGCGAAGGGAGCGA AGGCGCCGCCCGGGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAACGTGCGCGCCTCGAGCCCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCG  GCAGCNTGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCCGACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCGGCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTT                   ]




>consensus_14665#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAAGTGCATTCTGACACA
GCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGA
TGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCA
ATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTT
CGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGC
TCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGC
TCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATA
GACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCA
TGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACC
CGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCG
GCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTG
ACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAG
TTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACA
CTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACA
AAACCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCC
CCTTCAGCCTTTGCTCCGGACTTGACCAAATCAAACTGTGATGTTCTGAACCTCCTAATT
GCTTCCACACTCTTCATCAAATTCTCCATTGCGCTACCATCATACAGCTTTGCACCATGC
CCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACG
CGGTACTCCTCCCCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCT
TTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCT
GGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGG
ATGGCTTCAAGGTACTGCATCCCCACGCACTTCATGTCCTGGGAGCCACGCGCGTAGATG
CGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCC
GACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCG
GGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGC
CCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGC
TGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCC
GACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCG
GCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTTGCTCGCCATTGCGAGCAGG

consensusID : consensus_14665#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1016
fasta sequence

                              [TCTTTTTTTTCCCAGGAGCAAAAGCAACTCCAGGCATAAATTTTTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAACCCTGAAAAAGAGAAGTCAAGGAAAACTCATCAACTACAACCACTAAAACCCATAACATAAGCTAATAATTATAATGGATGAATCATACATAAAAGCATAAAATGGAAATGAACAATTCTACAACTCCAAGAATGGCTGGATACAAAAGTCTAAGATTCAGAAGACGAGTGTGAC]

[+] EMBL CB681684             [TCTTTTTTTTCCCAGGAGCAAAAGCAACTCCAGGCATAAACCAGTGCATTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATG                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB683829             [                                   tctttTTTTTGCATTCTGACACAGCATGCATTGCATTGCGCGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAAGAGGGAGTCGGATGTCTAGACCTA                                                                                                                                                                                                                  ]
[-] EMBL AU166435             [                                        TTTTTTTTTTCTGACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAAAAACTCATTGTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB652996             [                                                     ACACAGCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTA                                                                                                                                                                                                                  ]
[-] EMBL CF308760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATTGTGATCATGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAAACCCTGAAAAAGAGAAGTCAAGGAAAACTCATCAACTACAACCACTAAAACCCATAACATAAGCTAATAATTATAATGGATGAATCATACATAAAAGCATAAAATGGAAATGAACAATTCTACAACTCCAAGAATGGCTGGATACAAAAGTCTAAGATTCAGAAGACGAGTGTGAC]




>consensus_14665#1
TCTTTTTTTTCCCAGGAGCAAAAGCAACTCCAGGCATAAATTTTTGCATTCTGACACAGC
ATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGATG
CATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCAAT
TTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTTCG
ATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGCTC
CATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGCTC
TGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATAGA
CTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCATG
GAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACCCG
AAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCGGC
TCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTGAC
GGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAGTT
GCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACACT
AGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACAAA
ACCCTGAAAAAGAGAAGTCAAGGAAAACTCATCAACTACAACCACTAAAACCCATAACAT
AAGCTAATAATTATAATGGATGAATCATACATAAAAGCATAAAATGGAAATGAACAATTC
TACAACTCCAAGAATGGCTGGATACAAAAGTCTAAGATTCAGAAGACGAGTGTGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14665#0      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAAGTGCATTCTGACACA 60
consensus_14665#1      --TCTTTTTTTTCCCAGGAGCAAAAGCAACTCCAGGCATAAATTTTTGCATTCTGACACA 58
                         * ********                  *       ****    **************

consensus_14665#0      GCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGA 120
consensus_14665#1      GCATGCATTGCATTGCGTGGGTTTACTTTTCTTATTCTTTTTACAGCAGTGAGCCAATGA 118
                       ************************************************************

consensus_14665#0      TGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCA 180
consensus_14665#1      TGCATCAAGCAGCACCAGCAGTTGCGAAAAGCATACAGGTTAACTGCAAATGCAGGATCA 178
                       ************************************************************

consensus_14665#0      ATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTT 240
consensus_14665#1      ATTTATTCTAAAATCTAAACAGGTTTCAATGAAAATTTACAACGATCGTGTTCGAAGTTT 238
                       ************************************************************

consensus_14665#0      CGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGC 300
consensus_14665#1      CGATTCCACCCTAGGAGCAGTAAGAAAACACAGTTGATTTGCCGAAACATGTTTCTGTGC 298
                       ************************************************************

consensus_14665#0      TCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGC 360
consensus_14665#1      TCCATCTGATTGCAAGAATTATGGCAGTATCAGGTTTTGCCTAAACATTTTCTTCATAGC 358
                       ************************************************************

consensus_14665#0      TCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATA 420
consensus_14665#1      TCTGCCCTGGATTCGTAGTCGACATTGCTGTCCTTAAGAGTGGCCAATGTCCTGATGATA 418
                       ************************************************************

consensus_14665#0      GACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCA 480
consensus_14665#1      GACTCGTATATCCCAATCCCTTTGAGGTACTCATCTTTGCTCAGAAACTCATTGTGATCA 478
                       ************************************************************

consensus_14665#0      TGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACC 540
consensus_14665#1      TGGAGCAATATCGGTGTGTTTGTCATTGGAGAAAAACCAAATGCTGGTATCCCAAGCACC 538
                       ************************************************************

consensus_14665#0      CGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCG 600
consensus_14665#1      CGAAAGTAACGAGCATCAGTAGAGGCCGGGAATATTTCCGGCTTACCAAGTTTGCCACCG 598
                       ************************************************************

consensus_14665#0      GCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTG 660
consensus_14665#1      GCTCTCTTCACAGCCTCTTCAAATAGAGCCCACCATACATTTGAGCTATCAGCAGGGGTG 658
                       ************************************************************

consensus_14665#0      ACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAG 720
consensus_14665#1      ACGGCTGGCTTGCCAAAGTTGTCAAGTACAGAGGTCTTTTGTTTGAACTCAAATGTCAAG 718
                       ************************************************************

consensus_14665#0      TTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACA 780
consensus_14665#1      TTGCGTGAAGAAGGTGCCCATTCTTCAGCAAGACGCTTCTCTAGAGCCTCAGTATGAACA 778
                       ************************************************************

consensus_14665#0      CTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACA 840
consensus_14665#1      CTAGGAGGGAGTCGGATGTCTAGACCTATCTCTGCTTCAGATGGTTGTAGATTCATGACA 838
                       ************************************************************

consensus_14665#0      AAACCCGTTGGTGTCGGTGTGCCAGCCTTCAAGTATGCAAAATTCACTGATACAACATCC 900
consensus_14665#1      AAACCC--TGAAAAAGAGAAGTCAA-----------GGAAAACTCATCAA--CTACAACC 883
                       ******  **     *    * **            * **** ***   *  * *** **

consensus_14665#0      CCTTCAGCCTTTGCTCCGGACTTGACCAAATCAAACTGTGATGTTCTGAACCTCCTAATT 960
consensus_14665#1      ACTAAAACCCATA------ACATAAGCTAAT--AATTATAATGGA-TGAATCATACATAA 934
                        **  * **  *       ** * * * ***  ** * * ***   **** *    *   

consensus_14665#0      GCTTCCACACTCTTCATCAAATTCTCCATTGCGCTACCATCATACAGCTTTGCACCATGC 1020
consensus_14665#1      AAGCATAAAATGGAAATGAACAATTCTACAACTCCAAGA----ATGGCTGGATACAAAAG 990
                             * * *    ** **    ** *   * * *  *    *  ***    ** *   

consensus_14665#0      CCTGGGGCTCCTTTAGCTTTAATAGTAAGCCACCAAGGACTACGCTCCCCATAGAACACG 1080
consensus_14665#1      TCTAAGATTCAGAAGACGAGTGTGAC---------------------------------- 1016
                        **  *  **      *     *                                     

consensus_14665#0      CGGTACTCCTCCCCAGGTGATGCAAGCCCTTCATCGAGAACCAAACCTACATTCATGTCT 1140
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      TTGAACTCCTTTGATGCAACAAATGCTTCTATACCCTCATGCCCACCAATTTCTTCATCT 1200
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      GGAACAAATGTAAGATAGATATTCCGATCTGGGATAAAGCCTGCACTACGAAGACGGCGG 1260
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      ATGGCTTCAAGGTACTGCATCCCCACGCACTTCATGTCCTGGGAGCCACGCGCGTAGATG 1320
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      CGGCCGGATGCCTCGTCGAGGGCGGCGGAGAAGGGCGGGTGGTCCCACTTGTGCGGCTCC 1380
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      GACGGCACGACGTCGGTGTGGGAGTTGAGGAGCAGCGAAGGGAGCGACGGGCGCCGCCCG 1440
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      GGCCACCGGAGCAGCAGCAGGGGCTTGCCGGCGACGAGCTCGAGCGTGCGCGCCTCGAGC 1500
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      CCCGCGGCGCCGGCCTGCCCCCGGAGGAACGCCACCGCCGCGGCGTAGTCCGGCGCCGGC 1560
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      TGCGCCGTGTCGATGCGGAGGTACTCCCGGAACCGGGAGACCACCGCCTCCTCCGCGTCC 1620
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      GACGACGAGACGGCTGGCACGGGGAGGACGAGGAGGAGACCGAGGAGAAGGCTGGCGGCG 1680
consensus_14665#1      ------------------------------------------------------------
                                                                                   

consensus_14665#0      GCGGCGGCCATGGGAGACGCCTGCGTCGAGCTCTTCTTGCTCGCCATTGCGAGCAGG 1737
consensus_14665#1      ---------------------------------------------------------