cluster # 14669

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Oryza sativa
cluster # 14669 cluster # 14669 Sequences # 17 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14669#0 length = 619 sequences # 10
consensus_14669#1 length = 567 sequences # 2

consensus_14669#2 length = 406 sequences # 2
consensus_14669#3 length = 393 sequences # 2
consensus_14669#4 length = 320 sequences # 1

consensusID : consensus_14669#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 619
fasta sequence

                              [ACGACAAACACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGA-CGCGG-CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG-CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG-AGGCGA-TGCC--GGAGTGG-CGCGTGGACTG-CCTCCT-CCGGGAGTACGGCCT-CCCCGTCG-ACGGCGGCGTGGAGGAGAAGC-GGA-GGTTCGCCA-TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGT-CTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTA-CTA-TACGTTCATAAAGATATGGAAGAATACATTATTTTGCTCTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK105345             [ACGACAAACACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGAGCGCGG CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GGAGTGG CACGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGA GGTTCGCCA TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATGTTGTA                                                                            ]
[+] EMBL AU083418             [         ACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGA GCCGG CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GGAGTGG CGCGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGA GGTTCGCCA TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATT                                                                                                                                                                           ]
[+] EMBL OS0767A              [         ACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGA C CGG CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GGAGTGG CGCGTGGACTG CCTCCT CCGGGAGTACGGCCT TCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGA GGTTCG CA TG                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU075614             [           CACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGAGCGCGG CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATGCCCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GGAGTGG CGCGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGA GGTTCGCCA TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGT NTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTA CTA TACGTTCATAAAGATATGGAAGAATACATTATTTTGCTCTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL OSC05211             [             CAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGA CGCGG CGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GAAGTGG CGCGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGCGGGA GGTTGGCCATTGGGCG                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC17141             [              AAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGA CCCGGNCGAAGATGGCCGGCGGCGGGCAGCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGGCGGCTTCCAGATG CCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACG AGGCGA TGCC  GGAGTGG CGCGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGA GGTTCGCCA TGGGCGCCTTCCTCTGGCCCGACCANTACTGAAGCTTNCTGTGCTTCG CTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCA                                                                                                                                                                                                                        ]
[+] EMBL D42349               [                    AGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGGGATCGTTGGGCCCTGCTGTTGTGGTGAGCGCG   G GG CGAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C98136               [                                                                                                                                                                                                                                      ACGAAGCCGANTGCCCGGGATTGGCCGCTTGGACTGCCCTCCTCCCGGGAGTACGGCCTCCCCCGTCGAACGGCGGCNTGGAGGAGAAGC GGA GGTTCGCCA TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGT NTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTA CTACTACGTTCATAAAGATATGGAAGAATACATTATTTTGCTCTTAAAAAAAAAAA        ]
[-] EMBL D42726               [                                                                                                                                                                                                                                                            GG CGNGTGGACTG CCTCCT CCGGGAGTACGGCCT CCCCGTCG ACGGCGGCGTGGAGGAGAAGC GGAGGGGTNTCCA TGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGT CTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGNGCTCTATATATATTAATTAATCTATTATGT                                                                                                                                                           ]
[-] EMBL D42642               [                                                                                                                                                                                                                                                                                                                                                                   GACCAGTACTGAAGCTTGCTG  CGTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTGCTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTATCTACTACGTTCATAAAGATATGGAAGAATACATTATTTTG                        ]




>consensus_14669#0
ACGACAAACACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGG
GATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGACGCGGCGAAGATGGCCGGCGGCGGGCA
GCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGG
CGGCTTCCAGATGCCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACGAGGCGATGCC
GGAGTGGCGCGTGGACTGCCTCCTCCGGGAGTACGGCCTCCCCGTCGACGGCGGCGTGGA
GGAGAAGCGGAGGTTCGCCATGGGCGCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCT
GTCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGC
TAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCT
GAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGATG
TTGTAAATATTTCCTACTATACGTTCATAAAGATATGGAAGAATACATTATTTTGCTCTT
AAAAAAAAAAAAAAAAAAA

consensusID : consensus_14669#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 567
fasta sequence

                              [CGACGAGACAAGGGGGGGCTCCCCGTCGACGGCAACCTTGACGCCAAGCGGCGGTTCGCCATGGGCGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCAGCTACTACGTACGTTGCTGCAGCTAAGCTACTCTCCCTCTCCGTCCGAAAATTTGAAGAGCCTAAAATCGAAAGGGATATTTCCTAATACCACGAATCCGGATATGCTGCTCAATAGCAACTTAATTTTCCTCCTCTCCGACCCGACTACGCTGCACTATAGCCCCTACATTTACGGTTCTTCTTGGTGGACGCGAGCTGGCCGATCGACCAAGCCGTAAACGTTTTTGCATCCGACGTACAGTACGGGGTATGTTAGATGCCCTTCCAAGTGTGTGTTTCGACTAAGCCATATCATATTTTCTTATGTTGTGCTGCACATTATATAGTGTACTGGACACTGTTGTATTATATAGGCACGTGCATCTATGTACGTATGTTATCAACCTGTAATACAAATATATTCAGTATATGTTATCACATTGTAAATTGTGTCAAAAAAAAAAAA]

[+] EMBL CA763748             [CGACGAGACAAGGGGGGGCTCCCCGTCGACGGCAACCTTGACGCCAAGCGGCGGTTCGCCATGGGCGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCAGCTACTACGTACGTTGCTGCAGCTAAGCTACTCTCCCTCTCCGTCCGAAAATTTGAAGAGCCTAAAATCGAAAGGGATATTTCCTAATACCACGAATCCGGATATGCTGCTCAATAGCAACTTAATTTTCCTCCTCTCCGACCCGACTACGCTGCACTATAGCCCCTACATTTACGGTTCTTCTTGGTGGACGCGAGCTGGCCGATCGACCAAGCCGTAAACGTTTTTGCATCCGACGTACAGTACGGGGTATGTTAGATGCCCTTCCAAGTGTGTGTTTCGACTAAGCCATATCATATTTTCTTATGTTGTGCTGCACATTATATAGTGTACTGGACACTGTTGTATTATATAGGCACGTGCATCTATGTACGTATGTTATCAACCTGTAATACAAATATATTCAGTATATGTTATCACATTGTAAATTGTGTCAAAAAAAAAAAA]
[+] EMBL AU077976             [                                                                                                                                                                                            tGAANGGGATATTTCCTAATACCACGAATCCGGATATGCTGCTCATTAGCAACTTAATTTTCCTCCTCTCCGACCCGACTACGCTGCACTATAGCCCCTACATTTACGGTTCTTCTTGGTGGACGCGAGCTGACCGATCGACCAAGCCGTAAACGTTTTTGCATCCGACGTACAGTACGGGGTATGTTAGATGCCCTTCCAAGTGTGTGTTTCGACTAAGCCATATCATATTTTCTTATGTTGTGCTGCACATTATATAGTGTACTGGACACTGTTGTATTATATAGGCACGTGCATCTATGTACGTATGTTATCAACTTGTAATACAAATATATTCAATATATGTTATCACATTGTAAAaaa                ]




>consensus_14669#1
CGACGAGACAAGGGGGGGCTCCCCGTCGACGGCAACCTTGACGCCAAGCGGCGGTTCGCC
ATGGGCGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCA
GCTACTACGTACGTTGCTGCAGCTAAGCTACTCTCCCTCTCCGTCCGAAAATTTGAAGAG
CCTAAAATCGAAAGGGATATTTCCTAATACCACGAATCCGGATATGCTGCTCAATAGCAA
CTTAATTTTCCTCCTCTCCGACCCGACTACGCTGCACTATAGCCCCTACATTTACGGTTC
TTCTTGGTGGACGCGAGCTGGCCGATCGACCAAGCCGTAAACGTTTTTGCATCCGACGTA
CAGTACGGGGTATGTTAGATGCCCTTCCAAGTGTGTGTTTCGACTAAGCCATATCATATT
TTCTTATGTTGTGCTGCACATTATATAGTGTACTGGACACTGTTGTATTATATAGGCACG
TGCATCTATGTACGTATGTTATCAACCTGTAATACAAATATATTCAGTATATGTTATCAC
ATTGTAAATTGTGTCAAAAAAAAAAAA

consensusID : consensus_14669#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 406
fasta sequence

                              [AAAAAAAAAAAAAAAGAAAATCATATATAGTCCTAGCTAGTCTCCTAGACTCCTAGTCCTAGCTGCAAGAAAGCCACATTGGCCATGGGATCGTTGGGTCCAAGCGTGGTGGGGCTGCAGCCCAAGGCCGAGAAGACGACGGCGGCGGCCGGCGGTGAGCAGCAGCACGGCGGCGGCGGCGGCGGGTGTGGCGGGTCGTCGTTCCGGATGCCGCTGCACTACCCGCGGTACAAGAAGGCGGAGTACGAGGCGATGCCGGAGTGGCGGGTGGACTGCCTGCTCCGGGAGTACGGGCTCCCCGTTCGACGGCGACCTTCTACGCCAAGCGGCGGTTTCGCCATGGGGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCAGCTACTAC]

[+] EMBL OSS0820A             [AAAAAAAAAAAAAAAGAAAATCATATATAGTCCTAGCTAGTCTCCTAGACTCCTAGTCCTAGCTGCAAGAAAGCCACATTGGCCATGGGATCGTTGGGTCCAAGCGTGGTGGGGCTGCAGCCCAAGGCCGAGAAGACGACGGCGGCGGCCGGCGGTGAGCAGCAGCACGGCGGCGGCGGCGGCGGGTGTGGCGGGTCGTCGTTCCGGATGCCGCTGCACTACCCGCGGTACA                                                                                                                                                                              ]
[+] EMBL AU077975             [        AAAAAAAGAAAATCATATATAGTCCTAGCTAGTCTCCTAGACTCCTAGTCCTAGCTGCAAGAAAGCCACATTGGCCATGGGATCGTTGGGTCCAAGCGTGGTGGGGCTGCAGCCCAAGGCCGAGAAGACGACGGCGGCGGCCGGCGGTGAGCAGCAGCACGGCGGCGGCGGCGGCGGGTGTGGCGGGTCGTCGTTCCGGATGCCGCTGCACTACCCGCGGTACAAGAAGGCGGAGTACGAGGCGATGCCGGAGTGGCGGGTGGACTGCCTGCTCCGGGAGTACGGGCTCCCCGTTCGACGGCGACCTTCTACGCCAAGCGGCGGTTTCGCCATGGGGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCAGCTACTAC]




>consensus_14669#2
AAAAAAAAAAAAAAAGAAAATCATATATAGTCCTAGCTAGTCTCCTAGACTCCTAGTCCT
AGCTGCAAGAAAGCCACATTGGCCATGGGATCGTTGGGTCCAAGCGTGGTGGGGCTGCAG
CCCAAGGCCGAGAAGACGACGGCGGCGGCCGGCGGTGAGCAGCAGCACGGCGGCGGCGGC
GGCGGGTGTGGCGGGTCGTCGTTCCGGATGCCGCTGCACTACCCGCGGTACAAGAAGGCG
GAGTACGAGGCGATGCCGGAGTGGCGGGTGGACTGCCTGCTCCGGGAGTACGGGCTCCCC
GTTCGACGGCGACCTTCTACGCCAAGCGGCGGTTTCGCCATGGGGCCTTCCTCTGGCCCG
ACCAGTACTAGCTCTAGCTAGCTACATCCATGGCATCAGCTACTAC

consensusID : consensus_14669#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 393
fasta sequence

                              [CCGGAGTGGCGCGTGGTCTGCCTCCTCCGGGAGTACGGCCTCCCCGTCGACGCGGCTGGAGGAGAAGCGGAGGTTCCCATGGGCCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTCGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAACGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTACTACTACGTTCATAAAGATATGGAAGAATACTTATTTTGCTCTTAAATTAATTATGTTGGTGGACGTTTAATTAAAAA]

[+] EMBL BI810416             [CCGGAGTGGCGCGTGGTCTGCCTCCTCCGGGAGTACGGCCTCCCCGTCGACGCGGCTGGAGGAGAAGCGGAGGTTCCCATGGGCCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTCGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAACGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTACTACTACGTTCATAAAGATATGGAAGAATACTTATTTTGCTCTTAAATTAATTATGTTGGTGGACGTTTAATTAAAAA]
[+] EMBL BI810503             [                                                                       ttcgCCCATGGGCCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAA CCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTCGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAACGGCGCCATGGAAATATGGAATGATGATGTTGTAAATATTTCCTACTACTACGTTCATAAAGATATGGAAGAATACTTATTTTGCTCTTAAATTAATTATGTTGGTGGACGTTTAATTAAAAA]




>consensus_14669#3
CCGGAGTGGCGCGTGGTCTGCCTCCTCCGGGAGTACGGCCTCCCCGTCGACGCGGCTGGA
GGAGAAGCGGAGGTTCCCATGGGCCCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGT
GCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCT
AATTCGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTTTTTATTATGCTG
AGCTCGTGTTAATCTGTCATCCGCATATAACGGCGCCATGGAAATATGGAATGATGATGT
TGTAAATATTTCCTACTACTACGTTCATAAAGATATGGAAGAATACTTATTTTGCTCTTA
AATTAATTATGTTGGTGGACGTTTAATTAAAAA

consensusID : consensus_14669#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 320
fasta sequence

                              [TTTNTTTTTTAAGNGCAAAATAATGTATTCTTCCATATCTTTATGAACGNAGTAGTAGGAAATATTTACAACATCATCATTCCATATTTCCATGGCGNCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTCTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGNTNGTTGTAAA]

[-] EMBL C97623               [TTTNTTTTTTAAGNGCAAAATAATGTATTCTTCCATATCTTTATGAACGNAGTAGTAGGAAATATTTACAACATCATCATTCCATATTTCCATGGCGNCTTCCTCTGGCCCGACCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTAACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGTCTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATATGGAATGATGNTNGTTGTAAA]




>consensus_14669#4
TTTNTTTTTTAAGNGCAAAATAATGTATTCTTCCATATCTTTATGAACGNAGTAGTAGGA
AATATTTACAACATCATCATTCCATATTTCCATGGCGNCTTCCTCTGGCCCGACCAGTAC
TGAAGCTTGCTGTGCTTCGCCTTGGAGATATTCAGAAGCCGATCGAGCAGGGTACCAGTA
ACTGCATGATGCTAATTTGATTAGGAGCGCTCTATATATATTAATTAATCTATTATGTGT
CTTTATTATGCTGAGCTCGTGTTAATCTGTCATCCGCATATAATGGCGCCATGGAAATAT
GGAATGATGNTNGTTGTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14669#3      ------------------------------------------------------------
consensus_14669#4      ------------------------------------------------------------
consensus_14669#0      ACGACAAACACCACAAGCTAAGTAAGGAGTAAGTAGCTTTGCAAGATTCAGCACAAATGG 60
consensus_14669#2      ------------------------------------------------------------
consensus_14669#1      ------------------------------------------------------------
                                                                                   

consensus_14669#3      ------------------------------------------------------------
consensus_14669#4      ------------------------------------------------------------
consensus_14669#0      GATCGTTGGGCCCTGCTGTTGTGGTGAGCGCGACGCGGCGAAGATGGCCGGCGGCGGGCA 120
consensus_14669#2      ------------------------------------------------------------
consensus_14669#1      ------------------------------------------------------------
                                                                                   

consensus_14669#3      ------------------------------------------------------------
consensus_14669#4      ------------------------------------------------------------
consensus_14669#0      GCAGCCGTCGACGGAGAGGAAGGAGACGTCGTCGGCGTTCGGCGGCGGGTGCTGCGGCGG 180
consensus_14669#2      ------------------------------------------------------------
consensus_14669#1      ------CGACGAGACAAGGGGGGGCTCCCCGTCGACGGCAACCTTGACGCCAAGCGGCGG 54
                                                                                   

consensus_14669#3      ----------------------------------------------------------CC 2
consensus_14669#4      ----------------------------------------------TTTNTTTTTTAAGN 14
consensus_14669#0      CGGCTTCCAGATGCCGCTGCACTACCCGCGGTACAAGAAGGCGGACTACGAGGCGATGCC 240
consensus_14669#2      --------------------------------------------------------AAAA 4
consensus_14669#1      TTCGCCATGGGCGCCTTCCTCTGGCCCGACCAGTACTAGCTCTAGCTAGCTACATCCATG 114
                                                                                   

consensus_14669#3      GGAGTGGCGCGTG-GTCTGCCTCCTCCGGGAGTACGGCCTCCCCGTC--GACGCG-GC-T 57
consensus_14669#4      GCAAAATAATGTA-TTCTTCCATATCTTTATGAACGNAGTAGTAGGA--AATATTTAC-A 70
consensus_14669#0      GGAGTGGCGCGTG-GACTGCCTCCTCCGGGAGTACGGCCTCCCCGTC--GACGGCGGCGT 297
consensus_14669#2      AAAAAAAAAAAGA-AAATCATATATAGTCCTAGCTAGTCTCCTAGAC--TCCTAGTCCTA 61
consensus_14669#1      GCATCAGCTACTACGTACGTTGCTGCAGCTAAGCTACTCTCCCTCTCCGTCCGAAAATTT 174
                         *                                    *                    

consensus_14669#3      GGAGGA---------GAAGCGGAGGTTC-------CCATGG-GCCCTTCCTCTGGCCCGA 100
consensus_14669#4      ACATCA---------TCATTCCATATTT-------CCATGG-CGNCTTCCTCTGGCCCGA 113
consensus_14669#0      GGAGGA---------GAAGCGGAGGTTCG------CCATGGGCGCCTTCCTCTGGCCCGA 342
consensus_14669#2      GCTGCAA--------GAAAGCCACATTGG------CCATGG----GATCGTTGGGTCCAA 103
consensus_14669#1      GAAGAGCCTAAAATCGAAAGGGATATTTCCTAATACCACGAATCCGGATATGCTGCTCAA 234
                                        *    *  **        *** *          *   *  * *

consensus_14669#3      CCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATT---CAGAAGCCGAT-----CG 152
consensus_14669#4      CCAGTACTGAAGCTTGCTGTGCTTCGCCTTGGAGATATT---CAGAAGCCGAT-----CG 165
consensus_14669#0      CCAGTACTGAAGCTTGCTGT-CTTCGCCTTGGAGATATT---CAGAAGCCGAT-----CG 393
consensus_14669#2      GC-GTGGTGGGGCT-GCAGCCCAAGGCCGAGAAGACGACG-GCGGCGGCCGGCGG---TG 157
consensus_14669#1      TAGCAACTTAATTTTCCTCCTCTCCGACCCGACTACGCTGCACTATAGCCCCTACATTTA 294
                              *     *  *    *   * *  *   *       *    ***          

consensus_14669#3      AGCAGGGTACCAGTAACTGCATGA-TGCTAATTCGATTAGGAG-CGCTCTATATATATTA 210
consensus_14669#4      AGCAGGGTACCAGTAACTGCATGA-TGCTAATTTGATTAGGAG-CGCTCTATATATATTA 223
consensus_14669#0      AGCAGGGTACCAGTAACTGCATGA-TGCTAATTTGATTAGGAG-CGCTCTATATATATTA 451
consensus_14669#2      AGCAGCAGCACGGCGGCGGCG-GC-GGCGGGTGTGGCGGGTCGTCGTTCCGGATGCC--- 212
consensus_14669#1      CGGTTCTTCTTGGTGGACGCGAGCTGGCCGATCGACCAAGCCGTAAACGTTTTTGCATCC 354
                        *          *     **  *   **   *       *  *          *      

consensus_14669#3      ATTAATCTATTATGTGT-TTTTATTATGCTGAGCTCGTG-TTAAT-CTGTCATC-CGCAT 266
consensus_14669#4      ATTAATCTATTATGTGT-CTTTATTATGCTGAGCTCGTG-TTAAT-CTGTCATC-CGCAT 279
consensus_14669#0      ATTAATCTATTATGTGT-TTTTATTATGCTGAGCTCGTG-TTAAT-CTGTCATC-CGCAT 507
consensus_14669#2      GCTGCACTACC-CGCGG-TACAAGAAGGCGGAGTACGAG-GCGATGCCGGAGTGGCGGGT 269
consensus_14669#1      GACGTACAGTACGGGGTATGTTAGATGCCCTTCCAAGTGTGTGTTTCGACTAAGCCATAT 414
                             *      * *      *     *       * *     * *        *   *

consensus_14669#3      -ATAACGGC-GCCATGGAAATATGGAATGAT-GATG-TTGTAAATATTTCCTACTACTAC 322
consensus_14669#4      -ATAATGGC-GCCATGGAAATATGGAATGAT-GNTNGTTGTAAA---------------- 320
consensus_14669#0      -ATAATGGC-GCCATGGAAATATGGAATGAT-GATG-TTGTAAATATTTCCTACTA-TAC 562
consensus_14669#2      -GGACTGCCTGCTCCGGGAGTACGGGCTCCCCGTTCGACGGCGACCTTCTACGCCA-AGC 327
consensus_14669#1      CATATTTTCTTATGTTGTGCTGCACATTATATAGTGTACTGGACACTGTTGTATTATATA 474
                          *    *       *   *      *      *                         

consensus_14669#3      GTT-CATAAAGATATGGAAGAATAC--TTATTTTGCTCTTAAATTAATTATGTTGGTGGA 379
consensus_14669#4      ------------------------------------------------------------
consensus_14669#0      GTT-CATAAAGATATGGAAGAATACA-TTATTTTGCTCTTAAAAAAAAAAAAAAAAAAA- 619
consensus_14669#2      GGC-GGTTTCGCCATGGGGCCTTCCT-CTGGCCCGACCAGTACTAGCTCTAGCTAGCTAC 385
consensus_14669#1      GGCACGTGCATCTATGTACGTATGTTATCAACCTGTAATACAAATATATTCAGTATATGT 534
                                                                                   

consensus_14669#3      CGTTTAATTAAAAA------------------- 393
consensus_14669#4      ---------------------------------
consensus_14669#0      ---------------------------------
consensus_14669#2      ATCCATGGCATCAGCTACTAC------------ 406
consensus_14669#1      TATCACATTGTAAATTGTGTCAAAAAAAAAAAA 567