cluster # 14676

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Oryza sativa
cluster # 14676 cluster # 14676 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14676#0 length = 1795 sequences # 7

consensus_14676#1 length = 1268 sequences # 9
consensus_14676#2 length = 131 sequences # 1

consensusID : consensus_14676#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1795
fasta sequence

                              [CTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGTTCTCGGAGAGCCCCCCGCCTAATCCATCCCCATTTTTGTTTCATGCTTCTACGAATCGCTGCTGGGTTGTGGAATTTGGTGTAGTTTTAACTTTTAATCGCGTTCTGATTCCCACCGAATCGTGTTTGAAATGAAGCCCTATCTGCTGCATAATTCTTCGTGACTTGATTGTTTATTTGTTAATTCCTAAACAGGGCCACCATATTGGAATCTTCAGTCTGTGCGATCAACGATCAGTGTCAGTTTGTAGATCAAGTGGTACATTTGTGGATGTCAGAATGCGTAGCAGCTACAGCTAGTTTTATCAGTTAGATTCTTAACCAAGCTGTTCCCTCTTATGTCGACATAGCATGGTCCCGTGATTATATGAAGTGCTTAATGCCATTTGAGAATTTGAGAATTGAGGATGCTTACTTGCAATGTAAATGAACTTTCTGGCTACTTTATTGCTGCATTGAAGCTGTGACTAGGAAGATTTTATATTACTGTTTCCTTTCAAATGAAGAAAATTCTAGAATCTAGATAGGAGTACATCACTTGAAAACAGAATGAACCTCCTGGTTAGGGATTTCAAGGAATAAAACAGCTCGTTCTCAAGGCTGTCATTTCCTGTTCTATTTCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTGGGCAGAGCATCTTCTGCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGAGTGCAAGGCATTAGGATTTGACACCATCGAGCTGAATGCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGATTAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTGACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGAGGGCTGACTCTCTACGGGCAGACATCGTCGCCAAGTATAATGGGCCGGCTCGGGCTCGAGAAGACCATGTTCGAGGCTTCCAA-CCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGACGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGT-AGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAGACATGCCGTTACCGTAGCGTATC]

[+] EMBL CF323286             [CTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGTTCTCGGAGAGCCCCCCGCCTAATCCATCCCCATTTTTGTTTCATGCTTCTACGAATCGCTGCTGGGTTGTGGAATTTGGTGTAGTTTTAACTTTTAATCGCGTTCTGATTCCCACCGAATCGTGTTTGAAATGAAGCCCTATCTGCTGCATAATTCTTCGTGACTTGATTGTTTATTTGTTAATTCCTAAACAGGGCCACCATATTGGAATCTTCAGTCTGTGCGATCAACGATCAGTGTCAGTTTGTAGATCAAGTGGTACATTTGTGGATGTCAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB673638             [        GCCGGAGACCATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGTTCTCGGAGAGCCCCCCGCCTAATCCATCCCCATTTTTGTTTCATGCTTCTACGAATCGCTGCTGGGTTGTGGAATTTGGTGTAGTTTTAACTTTTAATCGCGTTCTGATTCCCACCGAATCGTGTTTGAAATGAAGCCCTATCTGCTGCATAATTCTTCGTGACTTGATTGTTTATTTGTTAATTCCTAAACAGGGCCACCATATTGGAATCTTCAGTCTGTGCGATCAACGATCAGTGTCAGTTTGTAGATCAAGTGGTACATTTGTGGATGTCAGAATGCGTAGCAGCTACAGCTAGTTTTATCAGTTAGATTCTTAACCAAGCTGTTCCCTCTTATGTCGACATAGCATGGTCCCGTGATTATATGAAGTGCTTAATGCCATTTGAGAATTTGAGAATTGAGGATGCTTACTTGCAATGTAAATGAACTTTCTGGCTACTTTATTGCTGCATTGAAGCTGTGACTAGGAAGATTTTATATTACTGTTTCCTTTCAAATGAAGAAAATTCTAGAATCTAGATAGGAGTACATCACTTGAAAACAGAATGAACCTCCTGGTTAGGGATTTCAAGGAATAAAACAGCTCGTTCTCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB673639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAGTGCTTAATGCCATTTGAGAATTTGAGAATTGAGGATGCTTACTTGCAATGTAAATGAACTTTCTGGCTACTTTATTGCTGCATTGAAGCTGTGACTAGGAAGATTTTATATTACTGTTTCCTTTCAAATGAAGAAAATTCTAGAATCTAGATAGGAGTACATCACTTGAAAACAGAATGAACCTCCTGGTTAGGGATTTCAAGGAATAAAACAGCTCGTTCTCAAGGCTGTCATTTCCTGTTCTATTTCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTGGGCAGAGCATCTTCTGCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGAGTGCAAGGCATTAGGATTTGACACCATCGAGCTGAATGCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGATTAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTGACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGAGGGCTGACTCTCTACGGGCAGACATCGTCGCCAAGTATAATGGGCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU082642             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGCGCGCTGACTCTCTACGGGCAGACATCGTCGCCAAG ATTGTAGGCCGGCTCGGGCTCGAGAAGACCATGTTCGAGGCTTCCAA CCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGT AGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAaaa                     ]
[+] EMBL CF331048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gagtagaAAGACCTTGTTCGAGGCTTCC A CCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTT AACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGACGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGT AGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACCGTAGCGTAT ]
[-] EMBL CF331047             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGAGGCTTCCAACCCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGACGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAAGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACCGTAGCGTATC]
[+] EMBL AU069883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCCAGTCCTATCTCGCATGGAAT CTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGT AGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAna                      ]




>consensus_14676#0
CTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCG
CTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTAC
GGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAG
GTTCTCGGAGAGCCCCCCGCCTAATCCATCCCCATTTTTGTTTCATGCTTCTACGAATCG
CTGCTGGGTTGTGGAATTTGGTGTAGTTTTAACTTTTAATCGCGTTCTGATTCCCACCGA
ATCGTGTTTGAAATGAAGCCCTATCTGCTGCATAATTCTTCGTGACTTGATTGTTTATTT
GTTAATTCCTAAACAGGGCCACCATATTGGAATCTTCAGTCTGTGCGATCAACGATCAGT
GTCAGTTTGTAGATCAAGTGGTACATTTGTGGATGTCAGAATGCGTAGCAGCTACAGCTA
GTTTTATCAGTTAGATTCTTAACCAAGCTGTTCCCTCTTATGTCGACATAGCATGGTCCC
GTGATTATATGAAGTGCTTAATGCCATTTGAGAATTTGAGAATTGAGGATGCTTACTTGC
AATGTAAATGAACTTTCTGGCTACTTTATTGCTGCATTGAAGCTGTGACTAGGAAGATTT
TATATTACTGTTTCCTTTCAAATGAAGAAAATTCTAGAATCTAGATAGGAGTACATCACT
TGAAAACAGAATGAACCTCCTGGTTAGGGATTTCAAGGAATAAAACAGCTCGTTCTCAAG
GCTGTCATTTCCTGTTCTATTTCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGG
TTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTAC
TGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTGGGCAGAGCATCTTCT
GCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGAGTGCAAGGCATTAGGATTTGA
CACCATCGAGCTGAATGCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGATTAGT
CCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTGACAG
TTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCA
GAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGA
AGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGAGGGCTGACTCTCT
ACGGGCAGACATCGTCGCCAAGTATAATGGGCCGGCTCGGGCTCGAGAAGACCATGTTCG
AGGCTTCCAACCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATC
TGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTG
GAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGACGTGACGACCTC
CCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAA
TGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAGT
ATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTC
ATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAGACATGCCGTTACCGTAGCGTATC

consensusID : consensus_14676#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1268
fasta sequence

                              [TTATCGCTCGATCAGGTGGCAGCGACAACGAGAGGGAGAGCGAGAGCTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGGAGATTGGGCAGAGCATCTTC-TGCGTC-AAGGACCTTCTTTTTTC-AAGCAATATGT-CGAGGAGTGCAAGGCA-TT-AGGA-TTTGACACCATCGAGC-TGAA-TNCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGATTAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTGACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGCGCGCTGACTCTCTACGGGCAGACATCGTCGCCAAGATTGTAGGCCGGCTCGGGCTCGAGAAGACCATGTTCGAGGCTTCCAACCCCAACACCTC-CGA-GTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAGTATGAAAAAAATGTAC-TCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTACTCCTGCCCGGAAACTTATTACTCCTTGTCACAGTTTATAGGGTGTTCTTTTACA-AGAAAAAAATAACTCGGTAAATGTTTGACTAAAAAAAAAAGCCCC]

[+] EMBL AK072958             [TTATCGCTCGATCAGGTGGCAGCGACAACGAGAGGGAGAGCGAGAGCTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTGGGCAGAGCATCTTC TGCGTC AAGGACCTTCTTTTTTC AAGCAATATGT CGAGGAGTGCAAGGCA TT AGGA TTTGACACCATCGAGC TGAA TGCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGATTAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTGACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGCGCGCTGACTCTCTACGGGCAGACATCGTCGCCAAGATTGTAGGCCGGCTCGGGCTCGAGAAGACCATGTTCGAGGCTTCCAACCCCAACACCTC CGA GTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAGTATGAAAAAAATGTAC TCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTACTCCTGCCCGGAAACTTATTACTCCTTGTCACAGTTTATAGGGTGTTCTTTTACA AGAAAAAAATAACTCGGTAAATGTTTGACTAATAACAATTGCCCC]
[+] EMBL AU069024             [             AGGTGGCAGCGACAACGAGAGGGAGAGCGAGAGCTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGGAGATTTGGCAGAGCATCTTC TGCGTCAAAGGACCTTCTTTTTTCAAAGCAATATGTCCGAGGAGTTCAAGGCATTT AGGATTTTNACACCATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C28266               [                                     GAGCGAGAG TAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTNGGCAGAGCATCTTC TTCGTC AAGGACCTTCTTTTTTC AAGCAATATTT CGAGGAGTGCAAGGCA TT AGGA TTTGACACCATCGAGT TGAA TNTTGGATCTCTCAAG TCCCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C28621               [                                                 AGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGGAGATTGGGCAGAGCATCTTC TGCGTC AAGGACCTTCTTTTTTC AAGCAATATGT CGAGGAGTGCAAGGCA TTAAGGA TTTGACACCATCGAGC TGAATTNCTGGATCTCTCAAGCTNCCGGAAGAAGCTCTtcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C28827               [                                                 AGTTCNCCGGAGAAGATNGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCNCTGTCGCTNCGNGGNTNCGGATTCGGCGACGGGGACGACGACCNGCCGGANAAGCCGCGGCGNTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCNCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTNGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTNAGTACAGGAGATTNGGCAGA CATCTTCTTGCGTC AAGGACCTTCTTTTTTC AAGCAATATNT CGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C28659               [                                                  GTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTNCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTNATGGGAAAAGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGGAGATTGGGCAGAGCATCTTC TGCGTC AAGGACCTTCTTTTTTC AAGCAATATGT CGAGGAGTGCAAGGCA TT AGGA TTTGACACCATCGAGCTTGAA TCTTGGATCTCTCAAGCTCCCNGAAGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI809466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGACCATGTTCGAGGCTGCC ACCCC ACACCTCGCGAGGTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGCCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGACCTCCCGGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAGTATGAAAAAAATGTACATTCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTACTCCTGCCCGGAAACTTATTACTCCCTGTCACAGTTTATAGGGTGTTCTTTTACACAGAAAAAAATAACTCGGTAAATGTTTGACTAAAAAAAAAA     ]
[+] EMBL AU172311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAACACCTC CGA GTGGTTCGTCAGAAGATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTGTAGTATGAAAAAAATGTAC TCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACTCTTCATTCTCTACTCCTGCCCGGAAACTTATTACTCCTTGTCACAGTTTATAGGGTGTTCTTTTACA AGAAAAAAATAACTCGGTAAAaaaa                    ]
[+] EMBL AU108878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTATACGACCNTCCTGNATCGTGCCAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCNTGCANTAACTGGATCTGGATGATGTGTAGTATGNNAAANATGTAC TCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTNTGTACTCTTCATTCTCTNCTCCTGCCCGGAAACTTATTANTCCTTGTCACAGTTTATAGGGTGTTCTTTTACA AGAAAAAAATAACTCGGTAAATGTTTGACTAAAAAAAAAAaa   ]




>consensus_14676#1
TTATCGCTCGATCAGGTGGCAGCGACAACGAGAGGGAGAGCGAGAGCTAAGTTCGCCGGA
GAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTGCGCGGGTGCGG
ATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTACGGGGTGACGGAGAT
GAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTC
TCTAGGTCCTTTTGTTGATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAA
AGAACTGGTTAGAGAGATTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGG
AGATTGGGCAGAGCATCTTCTGCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGA
GTGCAAGGCATTAGGATTTGACACCATCGAGCTGAATNCTGGATCTCTCAAGCTCCCGGA
AGAAGCTCTCCTGAGATTAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCT
GTTTTCAGTGAAGTTTGACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGC
ATACATAGTTCCAGTGAAGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAG
GAGGGCCGAGAGGTGCTTGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACAT
TTGCCAGCGCGCTGACTCTCTACGGGCAGACATCGTCGCCAAGATTGTAGGCCGGCTCGG
GCTCGAGAAGACCATGTTCGAGGCTTCCAACCCCAACACCTCCGAGTGGTTCGTCAGAAG
ATACGGGCCACGGGTGAATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCT
CCGAGGCTTCAACATGCGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTT
CTTCCTGATGTGACGACCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGC
CAGTCCTATCTCGCATGGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACT
GGATCTGGATGATGTGTAGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTC
ATGTATCGTATGTACTCTTCATTCTCTACTCCTGCCCGGAAACTTATTACTCCTTGTCAC
AGTTTATAGGGTGTTCTTTTACAAGAAAAAAATAACTCGGTAAATGTTTGACTAAAAAAA
AAAGCCCC

consensusID : consensus_14676#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 131
fasta sequence

                              [GGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTNCNGGTGCGGATTGGCGTCGGGGACGACGACGCGGGCCGGAGAAGCCGCGNGTACGGGGTGACGGAAATGAGGAGCCCCT]

[+] EMBL AA750084             [GGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTNCNGGTGCGGATTGGCGTCGGGGACGACGACGCGGGCCGGAGAAGCCGCGNGTACGGGGTGACGGAAATGAGGAGCCCCT]




>consensus_14676#2
GGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCGCTNCNGGTGCG
GATTGGCGTCGGGGACGACGACGCGGGCCGGAGAAGCCGCGNGTACGGGGTGACGGAAAT
GAGGAGCCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CTAAGTTCGCCGGAGAAGATGGCGATGCGGCGGTGGAGAGAGGATGCGGTGGCGCTGTCG 60
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CTGCGCGGGTGCGGATTCGGCGACGGGGACGACGACCGGCCGGAGAAGCCGCGGCGGTAC 120
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GGGGTGACGGAGATGAGGAGCCCCTTCTACGCCTTCCGCCCCGCCCACCACGCGCTCCAG 180
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GTTCTCGGAGAGCCCCCCGCCTAATCCATCCCCATTTTTGTTTCATGCTTCTACGAATCG 240
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CTGCTGGGTTGTGGAATTTGGTGTAGTTTTAACTTTTAATCGCGTTCTGATTCCCACCGA 300
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      ATCGTGTTTGAAATGAAGCCCTATCTGCTGCATAATTCTTCGTGACTTGATTGTTTATTT 360
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GTTAATTCCTAAACAGGGCCACCATATTGGAATCTTCAGTCTGTGCGATCAACGATCAGT 420
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GTCAGTTTGTAGATCAAGTGGTACATTTGTGGATGTCAGAATGCGTAGCAGCTACAGCTA 480
                                                                                   

consensus_14676#1      ------------------------------------------------------------
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GTTTTATCAGTTAGATTCTTAACCAAGCTGTTCCCTCTTATGTCGACATAGCATGGTCCC 540
                                                                                   

consensus_14676#1      --------------------TTATCGCTCGATCAGGTG-GCAGCGACAACGAGAGGGAGA 39
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GTGATTATATGAAGTGCTTAATGCCATTTGAGAATTTGAGAATTGAGGATGCTTACTTGC 600
                                                                                   

consensus_14676#1      GCGAGAGCTAAGTTCGCCGGAGAAGATGGCGATGCG-----GCGGTGGAGAG-AGGATGC 93
consensus_14676#2      ------------------GGAGAAGATGGCGATGCG-----GCGGTGGAGAG-AGGATGC 36
consensus_14676#0      AATGTAAATGAACTTTCTGGCTACTTTATTGCTGCATTGAAGCTGTGACTAGGAAGATTT 660
                                         **  *   *   * ***      ** ***   ** * ***  

consensus_14676#1      GGTGGCGCTGTCGCTGCGCGGGTGCGGA-----------TTCGGCGACGGGGACGACGAC 142
consensus_14676#2      GGTGGCGCTGTCGCTNCN--GGTGCGGA-----------TT-GGCGTCGGGGACGACGAC 82
consensus_14676#0      TATATTACTGTTTCCTTTCAAATGAAGAAAATTCTAGAATCTAGATAGGAGTACATCACT 720
                         *    ****  *        **  **           *   *    * * **  *   

consensus_14676#1      C--GGCCGGAG-AAGCCGCGGCGGTACGGGGTGACGGAGATGAGG-AGCCCCTTCT-ACG 197
consensus_14676#2      GCGGGCCGGAG-AAGCCGCGN--GTACGGGGTGACGGAAATGAGG-AGCCCCT------- 131
consensus_14676#0      TGAAAACAGAATGAACCTCCTGGTTAGGGATTTCAAGGAATAAAACAGCTCGTTCTCAAG 780
                             * **   * ** *     ** **  *    *  ** *   *** * *       

consensus_14676#1      CCTTCCGCCCCGCCCACCACGCGCTCCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTG 257
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GCTGTCATTTCCTGTTCTA----TTTCAGGAAATATTGGATTCTCTAGGTCCTTTTGTTG 836
                                                                                   

consensus_14676#1      ATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGA 317
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      ATGGTTTGAAGTTTACTGGTGGATCTCATAGTTTGATGGGAAAAGAACTGGTTAGAGAGA 896
                                                                                   

consensus_14676#1      TTACTGATTTAGCACACAAGCATGACATATATGTAAGTACAGGAGATTGGGCAGAGCATC 377
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TTACTGATTTAGCACACAAGCATGACATATATGTGAGTACAGGAGATTGGGCAGAGCATC 956
                                                                                   

consensus_14676#1      TTCTGCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGAGTGCAAGGCATTAGGAT 437
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TTCTGCGTCAAGGACCTTCTTTTTTCAAGCAATATGTCGAGGAGTGCAAGGCATTAGGAT 1016
                                                                                   

consensus_14676#1      TTGACACCATCGAGCTGAATNCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGAT 497
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TTGACACCATCGAGCTGAATGCTGGATCTCTCAAGCTCCCGGAAGAAGCTCTCCTGAGAT 1076
                                                                                   

consensus_14676#1      TAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTG 557
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TAGTCCGCCTCATCAAGACTAGTGGTTTGCAAGCAAAGCCCCTGTTTTCAGTGAAGTTTG 1136
                                                                                   

consensus_14676#1      ACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGA 617
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      ACAGTTCTGATATTCCTCCATCTGGAGATAGGGCATTTGGGGCATACATAGTTCCAGTGA 1196
                                                                                   

consensus_14676#1      AGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCT 677
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      AGCAGAATTCAGAAAGAGTCGAGGATGTTGACCTGTTGATAAGGAGGGCCGAGAGGTGCT 1256
                                                                                   

consensus_14676#1      TGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGCGCGCTGACT 737
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TGGAAGCAGGGGCAGACATGATCATGATCGATGCCGACGACATTTGCCAGAGGGCTGACT 1316
                                                                                   

consensus_14676#1      CTCTACGGGCAGACATCGTCGCCAAG-ATTGTAGGCCGGCTCGGGCTCGAGAAGACCATG 796
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CTCTACGGGCAGACATCGTCGCCAAGTATAATGGGCCGGCTCGGGCTCGAGAAGACCATG 1376
                                                                                   

consensus_14676#1      TTCGAGGCTTCCAACCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTG 856
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TTCGAGGCTTCCAACCCCAACACCTCCGAGTGGTTCGTCAGAAGATACGGGCCACGGGTG 1436
                                                                                   

consensus_14676#1      AATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATG 916
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      AATCTGTTCGTGGATCACTCCGACGTGATGAACCTGGAGCGTCTCCGAGGCTTCAACATG 1496
                                                                                   

consensus_14676#1      CGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGATGTGACGA 976
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CGTGGAGTCTGCAACTCTCCCTTATTCGGAATCGGCTCGCCCTTCTTCCTGACGTGACGA 1556
                                                                                   

consensus_14676#1      CCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCAT 1036
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CCTCCCTGAATCCTCCTGATGTATACGACCTTCCTGAATCGTGCCAGTCCTATCTCGCAT 1616
                                                                                   

consensus_14676#1      GGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTG 1096
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      GGAATGCTGTGTTCGTGGTGTTGAGATGCCTTCCTGCAATAACTGGATCTGGATGATGTG 1676
                                                                                   

consensus_14676#1      TAGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACT 1156
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      TAGTATGAAAAAAATGTACTCCTGTCTGCTAGCAGTATCAGCTCATGTATCGTATGTACT 1736
                                                                                   

consensus_14676#1      CTTCATTCTCTACTCCTGCCCGGAAACTTATTACTC-CTTGTCACAGTTTATAGGGTGTT 1215
consensus_14676#2      ------------------------------------------------------------
consensus_14676#0      CTTCATTCTCTAAAAAAAAAAAAAAAAAAAAAAAAGACATGCCGTTACC-GTAGCGTATC 1795
                                                                                   

consensus_14676#1      CTTTTACAAGAAAAAAATAACTCGGTAAATGTTTGACTAAAAAAAAAAGCCCC 1268
consensus_14676#2      -----------------------------------------------------
consensus_14676#0      -----------------------------------------------------