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Oryza sativa
cluster # 14687 cluster # 14687       Sequences # 17       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14687#0 length = 1879 sequences # 3  
consensus_14687#1 length = 1321 sequences # 1  
consensus_14687#2 length = 726 sequences # 10  
consensus_14687#3 length = 689 sequences # 2  
consensus_14687#4 length = 302 sequences # 1  

consensusID : consensus_14687#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1879
fasta sequence
                              [AACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGT--------GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGTCAGCAGATTAGTTCAGTATCGTTTCTTCAGCTTATTAACCGTGGCCAAATTTGAATTCTATAACTTAATTTTAGAGTTGATGTGGATGTGTTATTAATCATAGATTATTTCTCAACATTGGGTTTTATGCCGCTAATAACACATATGTAAAACCTTTACAAACAAATTATTTTTCGGTCGCTAATAAGCGTTACGGCTTATAATTTTCCTAGTGAACAGTGCATGCATTTTGCAAACTTCTTGTTGGCTCTGGTTGCAACTTGCAAGCACGCATATGCATTGAGAGAAGAGTTCATACACACACTGTATTATATATATGTACATTTGGGCTATAAGATACTAAAATGAAACAGGAGCATCGTGTTCTGAAATGGCGTGGCGTTCTTGTTTATTTTCAGCTTGTGTAATTGCTGGAGGGCAATAGCATGGGAAAACACTCTAATCTGAATCTGTGACACCTGGAACAGTAGCACCATTCTTGATGGCATAATACATGTACTTAACCACATGTTTATCGTTGGAATCCTGGTACAATGCTCCGAGCTGCATCGATCCATCCATGCGTGTTACCTCCATGTGTTCGAAGATGCTATATATTTGCATACGACAGGCACAGCTTCATGAATGTTACTTCGCACTGTCTTAACAAACTCCCTCAGTTTCATATTATAAGTCATTTGATTTTTTTTCCTAGTCAAGTATGACCAAGCTTATAGAAAAAATTAGAAACATCTAAAATAACAAACTAGTTTCAGAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGGGTTGAAAATACTAATATATTTTTCAATAAACTTGGTCCAACTTAACTAGAAAAAAAATCAAACGACTTATAATATGAAACGGAGGGAGAACTTTCCAAAGAACGACATTATCTTAATTTTAAGACATCGTTATTGTTTTTAAAATAATAATAGGATCACTAGTTTCTATTACAATATATTTGTAAAACACAATAATATGACAATATTATAGAGGTAGTACTACTTTTTGAGATTTCCATACATCCAATCTATAAATTGATCAAAGTTTCTGCTTCCACTCTGTTTCGTTCGTTCTTGAAAGTTTTCTTCTAACAGTATGATGATCTTGATCAATCAGGAACCAAGCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAAAAAAAGGAAGAAAAGAAAAGAAGCTTCCCTACT]

[+] EMBL AK063309             [AACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGT        GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGTCAGCAGATTAGTTCAGTATCGTTTCTTCAGCTTATTAACCGTGGCCAAATTTGAATTCTATAACTTAATTTTAGAGTTGATGTGGATGTGTTATTAATCATAGATTATTTCTCAACATTGGGTTTTATGCCGCTAATAACACATATGTAAAACCTTTACAAACAAATTATTTTTCGGTCGCTAATAAGCGTTACGGCTTATAATTTTCCTAGTGAACAGTGCATGCATTTTGCAAACTTCTTGTTGGCTCTGGTTGCAACTTGCAAGCACGCATATGCATTGAGAGAAGAGTTCATACACACACTGTATTATATATATGTACATTTGGGCTATAAGATACTAAAATGAAACAGGAGCATCGTGTTCTGAAATGGCGTGGCGTTCTTGTTTATTTTCAGCTTGTGTAATTGCTGGAGGGCAATAGCATGGGAAAACACTCTAATCTGAATCTGTGACACCTGGAACAGTAGCACCATTCTTGATGGCATAATACATGTACTTAACCACATGTTTATCGTTGGAATCCTGGTACAATGCTCCGAGCTGCATCGATCCATCCATGCGTGTTACCTCCATGTGTTCGAAGATGCTATATATTTGCATACGACAGGCACAGCTTCATGAATGTTACTTCGCACTGTCTTAACAAACTCCCTCAGTTTCATATTATAAGTCATTTGATTTTTTTTCCTAGTCAAGTATGACCAAGCTTATAGAAAAAATTAGAAACATCTAAAATAACAAACTAGTTTCAGAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGGGTTGAAAATACTAATATATTTTTCAATAAACTTGGTCCAACTTAACTAGAAAAAAAATCAAACGACTTATAATATGAAACGGAGGGAGAACTTTCCAAAGAACGACATTATCTTAATTTTAAGACATCGTTATTGTTTTTAAAATAATAATAGGATCACTAGTTTCTATTACAATATATTTGTAAAACACAATAATATGACAATATTATAGAGGTAGTACTACTTTTTGAGATTTCCATACATCCAATCTATAAATTGATCAAAGTTTCTGCTTCCACTCTGTTTCGTTCGTTCTTGAAAGTTTTCTTCTAACAGTATGATGATCTTGATCAATCAGGAACCAAGCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCT                                                ]
[+] EMBL CF306095             [                 AAGAAGACCCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGTTTTCTTGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGTTCTCCTTCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGTCAGCAGATTAGTTCAGTATCGTTTCTTCAGCTTATTAACCGTGGCCAAATTTGAATTCTATAACTTAATTTTAGAGTTGATGTGGATGTGTTATTAATCATAGATTATTTCTCAACATTGGGTTTTATGCCGCTAATAACACATATGTAAAACCTTTACAAACAAATTATTTTTCGGTCGCTAATAAGCGTTACGGCTTATAATTTTCCTAGTGAACAGTGCATGCATTTTGCAAACTTCTTGTTGGCTCTGGTTGCAACTTGCAAGCACGCATATGCATTGAGAGAAGAGTTCATACACACACTGTATTATATATATGTACATTTGGGCTATAAGATACTAAAATGAAACAGGAGCATCGTGTTCTGAAATGGCGTGGCGTTCTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL D42693               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTTAGCATATGAACTAATTAAATTAAATCCCAGGNAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAAAAAAAGGAAGAAAAGAAAAGAAGCTTCCCTACT]


>consensus_14687#0 AACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAG TGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATG CCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAA GCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGTCAGCAGATTAGTTCAGTA TCGTTTCTTCAGCTTATTAACCGTGGCCAAATTTGAATTCTATAACTTAATTTTAGAGTT GATGTGGATGTGTTATTAATCATAGATTATTTCTCAACATTGGGTTTTATGCCGCTAATA ACACATATGTAAAACCTTTACAAACAAATTATTTTTCGGTCGCTAATAAGCGTTACGGCT TATAATTTTCCTAGTGAACAGTGCATGCATTTTGCAAACTTCTTGTTGGCTCTGGTTGCA ACTTGCAAGCACGCATATGCATTGAGAGAAGAGTTCATACACACACTGTATTATATATAT GTACATTTGGGCTATAAGATACTAAAATGAAACAGGAGCATCGTGTTCTGAAATGGCGTG GCGTTCTTGTTTATTTTCAGCTTGTGTAATTGCTGGAGGGCAATAGCATGGGAAAACACT CTAATCTGAATCTGTGACACCTGGAACAGTAGCACCATTCTTGATGGCATAATACATGTA CTTAACCACATGTTTATCGTTGGAATCCTGGTACAATGCTCCGAGCTGCATCGATCCATC CATGCGTGTTACCTCCATGTGTTCGAAGATGCTATATATTTGCATACGACAGGCACAGCT TCATGAATGTTACTTCGCACTGTCTTAACAAACTCCCTCAGTTTCATATTATAAGTCATT TGATTTTTTTTCCTAGTCAAGTATGACCAAGCTTATAGAAAAAATTAGAAACATCTAAAA TAACAAACTAGTTTCAGAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGG GTTGAAAATACTAATATATTTTTCAATAAACTTGGTCCAACTTAACTAGAAAAAAAATCA AACGACTTATAATATGAAACGGAGGGAGAACTTTCCAAAGAACGACATTATCTTAATTTT AAGACATCGTTATTGTTTTTAAAATAATAATAGGATCACTAGTTTCTATTACAATATATT TGTAAAACACAATAATATGACAATATTATAGAGGTAGTACTACTTTTTGAGATTTCCATA CATCCAATCTATAAATTGATCAAAGTTTCTGCTTCCACTCTGTTTCGTTCGTTCTTGAAA GTTTTCTTCTAACAGTATGATGATCTTGATCAATCAGGAACCAAGCAGAGAGAATGGAGG AAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATT CCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTGTTCATTTATGA TTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGA TTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGC CCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTAC TCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTC CAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAAAAAAAGGAAGAAAA GAAAAGAAGCTTCCCTACT



consensusID : consensus_14687#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1321
fasta sequence
                              [GTACTCCATCCGTTTTATATTATAAGTTGTTTGACTTTTTTTCTAATTAAGTTTGACCAAACTTATTGAAAAAATTTAGCAACATCTAAAATACTAAACTAGTTAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGTGTTGAAAATACTAATATATTTTACTATAAACTTAGTTAAACTTAATTAGGAATAAAAGTCAAACGATATAGGGAGTACCTGCTACTACCATACAACTTTGTAGTAGTTACTTACTACTAAGAAAGTTATTGTACATAGATATTTAAATAGAATGTGATTTATGGGATAAGTACTATTTAATTTTAGATCCTACTACGGTGACACAATACGGAGATTTTGGAACTTGAAATGTCAGTCCCACTTGATGATCATCTGGATCGGTTCAGTCGGAAAGGATGAAATAAGGCCATCTCAATTCTAAGAAAACGCAGCAGGTTGACATGTGTGGTGCATGCAGCAGCCCAGCTTCTTGTACTTGTAGGTAGTGTTTGGTTTCGGGACTAAGTGGGATGGGATAGAACCATCCCTGATTTTTGGGTTGGGATGATTCCACTCACATGTTTGGTTTGTAAGATGGGACGATCCCAATTTTTTGTTTGGTTGAAGGGATGAGAGAGGGAAGGGATGGACGCCGTTTGCAATCACCGTCAACCGATCGCCGGATCTGCCACCACAGTCCTCCCCATCGCCGGAGGAAGAGCAAGAGGATGAGCCGACGGCGAGCAAGAGCAAGAGGAAAAGCCGGCGGCGAGCAAGAGGAAAAGCCGGCAGCGAGCAAGAGCAAGAGGAAAAGTCGCCGCCGCTCCTTCCCATCGCCGGATCCGCCGCCGTCCCTCGACTTCCTCCTCGCACGCCGCCGCCGCTCCTTCCCCGCGAGCTCCTCGTCGCAAGCCGCCGCAGCTTCTCCCCATCGCCGAATCCGCCGCCGCCCCATCGCCAGATCCGCCGCCGCCCCTAGACCTCCTCCTCGCACGCCGCCGCCGCTCCTCCCCCGCGAGCTCCTCCTCGCAAGCCGCCACAGTCCCCATCGCCGGATCCGCCGCCGCCCTTTGACCTCCTCCTCGCATGCCGCCGCCGCTCCTCCCCGTCGCCGAATCCGCCGCCGCAGTCCTCCCCATCGCCGGATCCACCGCCGCCGCCCTCCCCACCACTGGATCCGCCGTCGCCGTCGCCGAGCCCCCCGCCGTCGCGGTCGTCGTCGCCGAGCCCTGCGTGGTCGCCGTCGCACGAGCCGTATGCTGCTGCTCCCGAGGGCAAGCAGCACGAGCGCGGTAGGAAGGCGTTGTCATGCCGT]

[-] EMBL AK109666             [GTACTCCATCCGTTTTATATTATAAGTTGTTTGACTTTTTTTCTAATTAAGTTTGACCAAACTTATTGAAAAAATTTAGCAACATCTAAAATACTAAACTAGTTAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGTGTTGAAAATACTAATATATTTTACTATAAACTTAGTTAAACTTAATTAGGAATAAAAGTCAAACGATATAGGGAGTACCTGCTACTACCATACAACTTTGTAGTAGTTACTTACTACTAAGAAAGTTATTGTACATAGATATTTAAATAGAATGTGATTTATGGGATAAGTACTATTTAATTTTAGATCCTACTACGGTGACACAATACGGAGATTTTGGAACTTGAAATGTCAGTCCCACTTGATGATCATCTGGATCGGTTCAGTCGGAAAGGATGAAATAAGGCCATCTCAATTCTAAGAAAACGCAGCAGGTTGACATGTGTGGTGCATGCAGCAGCCCAGCTTCTTGTACTTGTAGGTAGTGTTTGGTTTCGGGACTAAGTGGGATGGGATAGAACCATCCCTGATTTTTGGGTTGGGATGATTCCACTCACATGTTTGGTTTGTAAGATGGGACGATCCCAATTTTTTGTTTGGTTGAAGGGATGAGAGAGGGAAGGGATGGACGCCGTTTGCAATCACCGTCAACCGATCGCCGGATCTGCCACCACAGTCCTCCCCATCGCCGGAGGAAGAGCAAGAGGATGAGCCGACGGCGAGCAAGAGCAAGAGGAAAAGCCGGCGGCGAGCAAGAGGAAAAGCCGGCAGCGAGCAAGAGCAAGAGGAAAAGTCGCCGCCGCTCCTTCCCATCGCCGGATCCGCCGCCGTCCCTCGACTTCCTCCTCGCACGCCGCCGCCGCTCCTTCCCCGCGAGCTCCTCGTCGCAAGCCGCCGCAGCTTCTCCCCATCGCCGAATCCGCCGCCGCCCCATCGCCAGATCCGCCGCCGCCCCTAGACCTCCTCCTCGCACGCCGCCGCCGCTCCTCCCCCGCGAGCTCCTCCTCGCAAGCCGCCACAGTCCCCATCGCCGGATCCGCCGCCGCCCTTTGACCTCCTCCTCGCATGCCGCCGCCGCTCCTCCCCGTCGCCGAATCCGCCGCCGCAGTCCTCCCCATCGCCGGATCCACCGCCGCCGCCCTCCCCACCACTGGATCCGCCGTCGCCGTCGCCGAGCCCCCCGCCGTCGCGGTCGTCGTCGCCGAGCCCTGCGTGGTCGCCGTCGCACGAGCCGTATGCTGCTGCTCCCGAGGGCAAGCAGCACGAGCGCGGTAGGAAGGCGTTGTCATGCCGT]


>consensus_14687#1 GTACTCCATCCGTTTTATATTATAAGTTGTTTGACTTTTTTTCTAATTAAGTTTGACCAA ACTTATTGAAAAAATTTAGCAACATCTAAAATACTAAACTAGTTAAAATCTAACATTGAA TATATTTTGATAATATGTTTGTTTTGTGTTGAAAATACTAATATATTTTACTATAAACTT AGTTAAACTTAATTAGGAATAAAAGTCAAACGATATAGGGAGTACCTGCTACTACCATAC AACTTTGTAGTAGTTACTTACTACTAAGAAAGTTATTGTACATAGATATTTAAATAGAAT GTGATTTATGGGATAAGTACTATTTAATTTTAGATCCTACTACGGTGACACAATACGGAG ATTTTGGAACTTGAAATGTCAGTCCCACTTGATGATCATCTGGATCGGTTCAGTCGGAAA GGATGAAATAAGGCCATCTCAATTCTAAGAAAACGCAGCAGGTTGACATGTGTGGTGCAT GCAGCAGCCCAGCTTCTTGTACTTGTAGGTAGTGTTTGGTTTCGGGACTAAGTGGGATGG GATAGAACCATCCCTGATTTTTGGGTTGGGATGATTCCACTCACATGTTTGGTTTGTAAG ATGGGACGATCCCAATTTTTTGTTTGGTTGAAGGGATGAGAGAGGGAAGGGATGGACGCC GTTTGCAATCACCGTCAACCGATCGCCGGATCTGCCACCACAGTCCTCCCCATCGCCGGA GGAAGAGCAAGAGGATGAGCCGACGGCGAGCAAGAGCAAGAGGAAAAGCCGGCGGCGAGC AAGAGGAAAAGCCGGCAGCGAGCAAGAGCAAGAGGAAAAGTCGCCGCCGCTCCTTCCCAT CGCCGGATCCGCCGCCGTCCCTCGACTTCCTCCTCGCACGCCGCCGCCGCTCCTTCCCCG CGAGCTCCTCGTCGCAAGCCGCCGCAGCTTCTCCCCATCGCCGAATCCGCCGCCGCCCCA TCGCCAGATCCGCCGCCGCCCCTAGACCTCCTCCTCGCACGCCGCCGCCGCTCCTCCCCC GCGAGCTCCTCCTCGCAAGCCGCCACAGTCCCCATCGCCGGATCCGCCGCCGCCCTTTGA CCTCCTCCTCGCATGCCGCCGCCGCTCCTCCCCGTCGCCGAATCCGCCGCCGCAGTCCTC CCCATCGCCGGATCCACCGCCGCCGCCCTCCCCACCACTGGATCCGCCGTCGCCGTCGCC GAGCCCCCCGCCGTCGCGGTCGTCGTCGCCGAGCCCTGCGTGGTCGCCGTCGCACGAGCC GTATGCTGCTGCTCCCGAGGGCAAGCAGCACGAGCGCGGTAGGAAGGCGTTGTCATGCCG T



consensusID : consensus_14687#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 726
fasta sequence
                              [AAAGAAACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT-CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC-ACCACCCAGGAACCAAGCAGAGAGAATGGA-GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG-TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGA-GGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTT-GTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGAT-GAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAAAAAA]

[+] EMBL CF319492             [AAAGAAACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAAAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGGGCAGAAGTTGGTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCT                                                                                              ]
[+] EMBL CF313576             [AAAGAAACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAGAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCT                                                                                                                                                                                                                                                                      ]
[+] EMBL C28090               [              GAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGANAGANATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAGAATGGAGGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGG AGGATTCCACACGGATTATATCTACACCCAAGATGTC AAAAGCCATAATGGCTG TTCATTTATGATTTG ACTAGT CTAGT GCTTAT                                                                                                                                                                                                                                                                             ]
[+] EMBL AU088597             [                 GAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAGAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTC                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU093559             [                   AGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAGAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCA                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL D43399               [                                 GCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTNTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCTCAGANTNGTGAATCCAGGAAGAACAGCTAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU093560             [                                                                                                                        GAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACC ACCACCCAGGAACCAAGCAGAGAG ATGGA GGAAGTACAGGTTCCAATAACAATGGGCNGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGA GGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCNACTCAGCCCATTTTGTGCAGAAGTT GTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGAT GAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAAAAAA]
[-] EMBL CF313575             [                                                                                                                                  GAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGNTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCT CCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCNACCACCCAGGAACCAAGCAGAGAGAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGA GGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTT GTCAGTGTTGCACTGTATAATTATTTAGTCATAAAAAA                                                                                                                   ]
[+] EMBL C26886               [                                                                                                                                                                                                                                                                                                       GAACCAAGCAGAGAGAATGGA GGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTG TTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGA GGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTT GTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGGAACTACTCCTATCTTCGNTGGAATTT                                                                              ]
[+] EMBL C97297               [                                                                                                                                                                                                                                                                                                                                                                    GATCCAGCCAAATGGGAAG ATTCCACNCGGATTATANCTACACCCAAGATGTC AAAAGCCATAATGGCTGTTTCATTTATGATNTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGA GGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTT GTCAGTGTTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGAT GAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAAAA    ]


>consensus_14687#2 AAAGAAACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTA GCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCAC TCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCC TGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAACCAA GCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAG CCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAAT GGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGT TCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAG GCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTT AGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCC AGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTAGCAAA AAAAAA



consensusID : consensus_14687#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 689
fasta sequence
                              [GCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAACCAAGCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAACCCATAATGGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTTTAGCAAAAAAAAAAGGAAGAAAAGAAAAGAAG]

[+] EMBL AB020505             [GCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAACCAAGCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAACCCATAATGGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTGCACTGTATAATTATTTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTTTAGCAAAAAAAAAAGGAAGAAAAGAAAAGAAG]
[-] EMBL D42686               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAGCCNATTTTGTGCAGAAGTTGTCAGTGTGCACTGTATAATTATTTAGTCATACNCAACTACTCCTGGTANCTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCT                                        ]


>consensus_14687#3 GCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGG CACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGC TCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAAC CAAGCAGAGAGAATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATT CAGCCAAATGGGAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAACCCAT AATGGCTGTTCATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTT TGTTCGTTTGGAGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCC CAGGCAAATCCCACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTGCACTGTATAATTAT TTAGTCATACACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTG CCAGACGTGACAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTTTAG CAAAAAAAAAAGGAAGAAAAGAAAAGAAG



consensusID : consensus_14687#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 302
fasta sequence
                              [GAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGGACCAAGCAGAGAGAATGGAGGNAGTACAGGTTCCAATAACAATGGG]

[+] EMBL D43567               [GAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGGACCAAGCAGAGAGAATGGAGGNAGTACAGGTTCCAATAACAATGGG]


>consensus_14687#4 GAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGTTCTTCTTTCTTTTGGTG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCTCAGAATGGTGAATC CAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCTTGCTCTCCTCCTGCTAGGTCAAG ATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAAGCACAGCCATGGCGTCGGCAACGGCA CAACCACCACCCAGGGACCAAGCAGAGAGAATGGAGGNAGTACAGGTTCCAATAACAATG GG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      AACAAAGAAGAAGAAGAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAG 60
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TGTGTTCTTCTTTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 120
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      AGAGAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATG 180
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      CCTTGCTCTCCTCCTGCTAGGTCAAGATACCCATTCCAGGAAGCTCCTGTTGCAGGAGAA 240
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      GCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGTCAGCAGATTAGTTCAGTA 300
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TCGTTTCTTCAGCTTATTAACCGTGGCCAAATTTGAATTCTATAACTTAATTTTAGAGTT 360
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      GATGTGGATGTGTTATTAATCATAGATTATTTCTCAACATTGGGTTTTATGCCGCTAATA 420
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      ACACATATGTAAAACCTTTACAAACAAATTATTTTTCGGTCGCTAATAAGCGTTACGGCT 480
consensus_14687#1      ------------------------------------------------------------
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TATAATTTTCCTAGTGAACAGTGCATGCATTTTGCAA-ACTTCTTGTTGGCTCTGGTTGC 539
consensus_14687#1      -----------------GTACTCCATCCGTTTTATATTATAAGTTGTTTGACTTTTTTTC 43
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      AACTTGCAAGCACGCATATGCATTGAGAGAAGAGTTCATACACACACTGTATTATATATA 599
consensus_14687#1      TAATTAAGTTTGACCAAACTTATTGAAAAAATTTAGCA-ACATCTAAAATACTAAACTAG 102
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TGTACATTTGGGCTATAAGATACTAAAATGAAACAGGAGCATCGTGTTCTGAAATGGCGT 659
consensus_14687#1      TTAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTGTGTTG-AAAATACTAA 161
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      GGCGTTCTTGTTTATTTTCAGCTTGTGTAATTGCTGGAGGGCAATAGCATGGGAAAACAC 719
consensus_14687#1      TATATTTTACTATAAACTTAGTTAAACTTAATTAGGAATAAAAGTCAAACGATATAGGGA 221
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TCTAATCTGAATCTGTGACACCTGGAACAGTAGCACCATTCTTGATGGCATAATACATGT 779
consensus_14687#1      GTACCTGCTACTACCATACAACTTTG-TAGTAGTTAC-TTACTACTAAGAAAGTTATTGT 279
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      ACTTAACCACATGTTTATCGTTGGAATCCTGGTACAATGCTCCGAGCTGCATCGATCCAT 839
consensus_14687#1      ACATAGATATTTAAATAGAATGTGATTTATGGGATAAGTACTATTTAATTTTAGATCCTA 339
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      CCATGCGTGTTACCTCCATGTGTTCGAAGATGCTATATATTTGCATACGACAGGCACAGC 899
consensus_14687#1      CTACG-GTGACACAATACGGAGATTTTGGAACTTGAAATGTCAGTCCCACTTGATGATCA 398
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TTCATGAATGTTACTTCGCACTGTCTTAACAAACTCCCTCAGTTTCATATTATAAGTCAT 959
consensus_14687#1      TCTGGATCGGTTCAGTCGGAAAGGATGAAATAAGGCCATCTCAATTCTAAGAAAACGCAG 458
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      TTGATTTTTTTTCCTAGTCAAGTATGACCAAGCTTATAGAAAAAATTAGAAACATCTAAA 1019
consensus_14687#1      CAGGTT----------GACATGTGTGGTGCATGCAGCAGCCCAGCTTCTTGTACTTGTAG 508
                                                                                   

consensus_14687#2      ------------------------------------------------------------
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      ATAACAAACTAGTTTCAGAAAATCTAACATTGAATATATTTTGATAATATGTTTGTTTTG 1079
consensus_14687#1      GTAGTGTTTGGTTTCGGGACTAAGTGGGATGGGATAGAACCATCCCTGATTTTTGGGTTG 568
                                                                                   

consensus_14687#2      ----------------------------------------AAAGAAACAAAGAAGAAGAA 20
consensus_14687#3      ------------------------------------------------------------
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      GGTTGAAAATACTAATATATTTT-TCAATAAACTTGGTCCAACTTAACTAGAAAAAAAAT 1138
consensus_14687#1      GGATGATTCCACTCACATGTTTGGTTTGTAAGATGGGACGATCCCAATTTTTTGTTTGGT 628
                                                                                   

consensus_14687#2      GAAAGAAGAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGT----TCTTCT 76
consensus_14687#3      -------------GCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGT----TCTTCT 43
consensus_14687#4      -------GAAGCAGCAGCAAAAAAGTTGATCAGTTAATTAGCAAGTGTGT----TCTTCT 49
consensus_14687#0      CAAACGACTTATAATATGAAACGGAGGGAGAACTTTCCAAAGAACGACAT----TATCTT 1194
consensus_14687#1      TGAAGGGATGAGAGAGGGAAGGGATGGACGCCGTTTGCAATCACCGTCAACCGATCGCCG 688
                                         **             **    *  *           *     

consensus_14687#2      TTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 136
consensus_14687#3      TTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAG------------------------A 79
consensus_14687#4      TTCTTTTGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG------------A 97
consensus_14687#0      AATTTTAAGACATCGTTATTGTTTTTAAAATAATAATAGGATCACTAGTTTCTATTACAA 1254
consensus_14687#1      GATCTGCCACCACAGTCCTCCCCATCGCCGGAGGAAGAGCAAGAGGATGAGCCG--ACGG 746
                           *      *  *                *                            

consensus_14687#2      GAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCT 196
consensus_14687#3      GAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCT 139
consensus_14687#4      GAGAGATCTCAGAATGGTGAATCCAGGAAGAACAGCTAGGGCACTCTGCCTCCTATGCCT 157
consensus_14687#0      TATATTTGTAAAACACAATAATATGACAATATTATAGAGGTAGTACTACTTTTTGAGATT 1314
consensus_14687#1      CGAGCAAGAGCAAGAGGAAAAGCCGGCGGCGAGCAAGAGGAAAAGCCGGCAGCGAGCAAG 806
                                   *      **                ***     *              

consensus_14687#2      TGCTCTCCTCCTGC-------TAGGTCAAGATACCCA-TTCCAGGAAGCTCCTGTTGCAG 248
consensus_14687#3      TGCTCTCCTCCTGC-------TAGGTCAAGATACCCA-TTCCAGGAAGCTCCTGTTGCAG 191
consensus_14687#4      TGCTCTCCTCCTGC-------TAGGTCAAGATACCCA-TTCCAGGAAGCTCCTGTTGCAG 209
consensus_14687#0      TCCATACATCCAATCTATAAATTGATCAAAGTTTCTGCTTCCACTCTGTTTCGTTCGTTC 1374
consensus_14687#1      AGCAAGAGGAAAAG--------TCGCCGCCGCTCCTT-CCCATCGCCGGATCCGCCGCCG 857
                         *                       *       *     *      *   *    *   

consensus_14687#2      GAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAACCAAGCAGAGAG 308
consensus_14687#3      GAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGAACCAAGCAGAGAG 251
consensus_14687#4      GAGAAGCACAGCCATGGCGTCGGCAACGGCACAACCACCACCCAGGGACCAAGCAGAGAG 269
consensus_14687#0      TTGAA--AGTTTTCTTCTAACAGTATGATGATCTTGATCAATCAGGAACCAAGCAGAGAG 1432
consensus_14687#1      TCCCT-CGACTTCCTCCTCGCACGCCGCCGCCGCTCCTTCCCCGCGAGCTCCTCGTCGCA 916
                                     *     *                     *  *  *    *   *  

consensus_14687#2      AATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGG 368
consensus_14687#3      AATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGG 311
consensus_14687#4      AATGGAGGNAGTACAGGTTCCAATAACAATGGG--------------------------- 302
consensus_14687#0      AATGGAGGAAGTACAGGTTCCAATAACAATGGGCAGCTGCAGTTTGATTCAGCCAAATGG 1492
consensus_14687#1      AGCCGCCGCAGCTTC--TCCCCATCGCCG-AATCCGCCGCCGCCCCATC--GCCAGATCC 971
                       *   *  * **      * ** **  *                                 

consensus_14687#2      GAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTGTTC 428
consensus_14687#3      GAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAACCCATAATGGCTGTTC 371
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      GAAGAATTCCACACGGATTATATCTACACCCAAGATGTCAAAAAGCCATAATGGCTGTTC 1552
consensus_14687#1      GCCGCCGCCCCTAGACCTCCTCCTCGCACGCC-GCCGCCGCTCCTCCCCCGCGAGCTCCT 1030
                                                                                   

consensus_14687#2      ATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGG 488
consensus_14687#3      ATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGG 431
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      ATTTATGATTTGAACTAGTACTAGTAGCTTATACCTTCTGCGCGTCTTTTGTTCGTTTGG 1612
consensus_14687#1      CCTCGCAAGCCGCCACAGTCCCCATCGCCGGATCCGCCGCCGCCCTTTGACCTCCTCCTC 1090
                                                                                   

consensus_14687#2      AGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCC 548
consensus_14687#3      AGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCC 491
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      AGAGGGGATTTTCTTGGGATTTAGCATATGAACTAATTAAATTAAATCCCAGGCAAATCC 1672
consensus_14687#1      GCATGCCGCCGCCGCTCCTCCCCGTCGCCGAATCCGCCGCCGCAG-TCCTCCCCATCGCC 1149
                                                                                   

consensus_14687#2      CACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATAC 608
consensus_14687#3      CACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGT-GCACTGTATAATTATTTAGTCATAC 550
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      CACTCAGCCCATTTTGTGCAGAAGTTGTCAGTGTTGCACTGTATAATTATTTAGTCATAC 1732
consensus_14687#1      GGATCCACCGCCGCCGCCCTCCCCACCACTGGATCCGCCGTCGCCGTCGCCGAGCCCCCC 1209
                                                                                   

consensus_14687#2      ACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGA 668
consensus_14687#3      ACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGA 610
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      ACAACTACTCCTGGTAACTACTCCTATCTTCGATGAATTTTCTGGTTTTGCCAGACGTGA 1792
consensus_14687#1      GCCGTCGCGGTCG-TCGTCGCCGAGCCCTGCGTGGTCGCCGTCGCACGAGCCGTATGCTG 1268
                                                                                   

consensus_14687#2      CAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTT--AGCAAAAAAAAA 726
consensus_14687#3      CAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTTTTAGCAAAAAAAAA 670
consensus_14687#4      ------------------------------------------------------------
consensus_14687#0      CAATAGTCCAGTAGCATGCAGTACCCTCTCAGAATCCCTGTAATTT--AGCAAAAAAAAA 1850
consensus_14687#1      CTGCT-CCCGAGGGCAAGCAGCACGAGCGCGGTAGGAAGGCGTTGTCATGCCGT------ 1321
                                                                                   

consensus_14687#2      -----------------------------
consensus_14687#3      AGGAAGAAAAGAAAAGAAG---------- 689
consensus_14687#4      -----------------------------
consensus_14687#0      AGGAAGAAAAGAAAAGAAGCTTCCCTACT 1879
consensus_14687#1      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)