cluster # 14692

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Oryza sativa
cluster # 14692 cluster # 14692 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14692#0 length = 1327 sequences # 10
consensus_14692#1 length = 787 sequences # 5

consensus_14692#2 length = 487 sequences # 1
consensus_14692#3 length = 231 sequences # 1

consensusID : consensus_14692#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1327
fasta sequence

                              [AACCCCCCCGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC-TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA-TGACCATTACATC-TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA-TGAGTA-TGGCCAAGGAT-GGGATACATGCAGTGC-TGAT-GGTTTTTTCTGCCACATC-TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACAT-TACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCAAAAAAAAAAAGA]

[+] EMBL CF312396             [AACCCCCCCGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTTCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCATCTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF196178             [      CCCGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGNNNNNTNTTGAGCTATGCAAAAACAGAGTTGNTCTCTTTGATNNTATGAnnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF303351             [        CGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGTTGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB674581             [           ATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK068385             [                 AGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGGGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACAT TACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATT                      ]
[+] EMBL C26149               [                                                                                  CCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACCGCGCTTAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAATTGACCATTACATCTTGAGGATGCCGGTAAAGAAATTNTTAAGTGTATTGAGTATTGGCCAAGGATGGGGATACATGCAGTGCTTGATGGGTTTTTTCTGCCACATCTTCGTTTTACTTGAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF327663             [                                                                                                                                                                                                                                                                                                      TGTGACCAGTACTTGTCAATTGGCAAAAACCGCGC TAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAA TGACCATTACATC CGAGGATGCCGGTTAATAAATTGTTAACTGTA TGAGTA TGTCCAAGGAT GGGATTCATGCAGTGC TGAT GGTTTTTTCTGCCACATG TGGTTTTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF312188             [                                                                                                                                                                                                                                                                                                                                                                                                     TACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACAT TACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGC                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF312281             [                                                                                                                                                                                                                                                                                                                                                                                                     TACATC TGAGGATGCCGGTAAAGAAATTGTTAAGTGTA TGAGTA TGGCCAAGGAT GGGATACATGCAGTGC TGAT GGTTTTTTCTGCCACATC TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACATNTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAAC                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB674582             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACAT TACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCAAAAAAAAAAAGA]




>consensus_14692#0
AACCCCCCCGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCG
ATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCG
CGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTT
GCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAAC
TGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGAC
CAGTACTTGTCAATTGGCCAGCACCGCGCTAAAGGATGGCCGTACCCTCAATGTTATTGA
TACGCCAGGATTATTTGAAATGACCATTACATCTGAGGATGCCGGTAAAGAAATTGTTAA
GTGTATGAGTATGGCCAAGGATGGGATACATGCAGTGCTGATGGTTTTTTCTGCCACATC
TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAA
GATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATT
GAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAA
CAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGA
AAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGA
TCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTAT
TGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGA
ACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCT
GCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGA
AGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCA
ACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGT
AGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAG
TTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCA
TATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCAAAAAA
AAAAAGA

consensusID : consensus_14692#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 787
fasta sequence

                              [CCAGAGTTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGANNCAACTTGAAAATTTNCTTGATGTTGTTGACTCTGTGAATNCAAATAATGGAGG-AAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACNGGAGGTGCATGATGCTATTGGATATNCAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCTTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCTGAAAAAAATCGTTTCCACAAGTGTTGCAGGCAAGGGATCAATGATCCCCTCCTTAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU100668             [CCAGAGTTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGANNCAACTTGAAAATTTNCTTGATGTTGTTGACTCTGTGAATNCAAATAATGGAGG AAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACNGGAGGTGCATGATGCTATTGGATATNCAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCTTGTGAAAAaaaaaaa                                                                                                  ]
[-] EMBL CF312189             [                                                                               TTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACATTACCAACATGG GGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGGTTTTGACTATCATCCCTGCTAGTTCATCCTTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCTGAAAAAA                                                                        ]
[-] EMBL CF312397             [                                                                                                                                                                                                                                                  ACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCCGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTTTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCTTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCTGAAAATGATCGTTTCCACAAGTGTTGCAGGCAAGGGATCAATGATCCCCTCCTTAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI811377             [                                                                                                                                                                                                                                                                                                                                               GCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAGATCTGCAAGCTCAAAAAGCGCCTCGAGAAGGCCC ACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTG   TAGGCTACGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAaaaaa                                                                                                                     ]
[-] EMBL D42963               [                                                                                                                                                                                                                                                                                                                                                     aaCAGAGAGGTTGGCAGCTGAANCAAGGCTNCGANTAAATTAGGAGATCCGCAAGCTCAAAAAGCGCCNCGAGAAGGCCCAAAAAGAAAATGNGGAATTCCGAAAGATGGCTTCTCAACAAAAGTGTTCTANNCTATGAGTAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCNCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGNCTATCTCATATCTGTAAATATACNGGTATTTGGATTT                                                                                                                                                             ]




>consensus_14692#1
CCAGAGTTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGANNCAACTT
GAAAATTTNCTTGATGTTGTTGACTCTGTGAATNCAAATAATGGAGGAAGCCATTTTCAG
ATCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACNGGAGGTGCATGATGCTA
TTGGATATNCAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATG
AACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGC
TGCAACAGCAACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTG
AAGCTAGGCTCCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCC
AACAAGAAAATGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAG
TAGCTTTCTCCTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGA
GTTCAGAACAGTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTC
ATATCTGTAAATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATCATCCC
TGCTAGTTCATCCTTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCTGAAAAAAATCGT
TTCCACAAGTGTTGCAGGCAAGGGATCAATGATCCCCTCCTTAAAAAAAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_14692#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence

                              [GGAGGANAAAGCTGTAAGTAGTCACTGTTGTACAAGCTGCAACAGCAACTCATGGTAAGAACAGAATGTCANAGGCTAGAAGTCAGAGAGGTTGGCAGCTGAAGTCTGAGGCTCCGATCAGATGGAGGAGATCTGGCAAGCTGCAAAAAGCGCCTGTCGAGAAGGCCCAACAGAGAAAATGGAGGAATTCACGAAAGATGGCTGTGCTGCGAACACCNATAGTGGTTGCTGATTGCTATGGAGTGAGCTTTGCTCCTAGGATGCAAGCTGCTGGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGTAGGCTACAGTGGTTGACATAAAACTTTTGCTACTGGGCTATGCTCATGATCTGTAAATATACAGGTATTTGGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCGTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCNGAAAAAAAAAA]

[+] EMBL BQ907619             [GGAGGANAAAGCTGTAAGTAGTCACTGTTGTACAAGCTGCAACAGCAACTCATGGTAAGAACAGAATGTCANAGGCTAGAAGTCAGAGAGGTTGGCAGCTGAAGTCTGAGGCTCCGATCAGATGGAGGAGATCTGGCAAGCTGCAAAAAGCGCCTGTCGAGAAGGCCCAACAGAGAAAATGGAGGAATTCACGAAAGATGGCTGTGCTGCGAACACCNATAGTGGTTGCTGATTGCTATGGAGTGAGCTTTGCTCCTAGGATGCAAGCTGCTGGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGTAGGCTACAGTGGTTGACATAAAACTTTTGCTACTGGGCTATGCTCATGATCTGTAAATATACAGGTATTTGGGATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCGTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCNGAAAAAAAAAA]




>consensus_14692#2
GGAGGANAAAGCTGTAAGTAGTCACTGTTGTACAAGCTGCAACAGCAACTCATGGTAAGA
ACAGAATGTCANAGGCTAGAAGTCAGAGAGGTTGGCAGCTGAAGTCTGAGGCTCCGATCA
GATGGAGGAGATCTGGCAAGCTGCAAAAAGCGCCTGTCGAGAAGGCCCAACAGAGAAAAT
GGAGGAATTCACGAAAGATGGCTGTGCTGCGAACACCNATAGTGGTTGCTGATTGCTATG
GAGTGAGCTTTGCTCCTAGGATGCAAGCTGCTGGCCATGGTTGAATGCTCCGTGCATTGT
TAATAGAGTTCAGAACAGTGTAGGCTACAGTGGTTGACATAAAACTTTTGCTACTGGGCT
ATGCTCATGATCTGTAAATATACAGGTATTTGGGATTTTTAATGTCCAAGGATTTTGACT
ATCATCCCTGCTAGTTCATCCGTGTGAAAAGTGAATTTTGGTGATCGTCTTCTTCNGAAA
AAAAAAA

consensusID : consensus_14692#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 231
fasta sequence

                              [TGTTCTATTCCTATGAGTANCTTTCTCCTAGGATCAACTCTCCCATGTTGAATCCCGCCTTTTAATAGAGTTCNGACATGTAGCTACGTGTTGACATAAAACTTTTGCTACTGGCTATCTCATATCTGTAAATATACAGTATTGGGATTTTTAATGGTCCAAGATTTTGACTATCATCCTGTTAGTTCACCCGTGTGAAAAGTGAATTTTGGTGATCTCTTCTTCGGAAAA]

[+] EMBL BM420749             [TGTTCTATTCCTATGAGTANCTTTCTCCTAGGATCAACTCTCCCATGTTGAATCCCGCCTTTTAATAGAGTTCNGACATGTAGCTACGTGTTGACATAAAACTTTTGCTACTGGCTATCTCATATCTGTAAATATACAGTATTGGGATTTTTAATGGTCCAAGATTTTGACTATCATCCTGTTAGTTCACCCGTGTGAAAAGTGAATTTTGGTGATCTCTTCTTCGGAAAA]




>consensus_14692#3
TGTTCTATTCCTATGAGTANCTTTCTCCTAGGATCAACTCTCCCATGTTGAATCCCGCCT
TTTAATAGAGTTCNGACATGTAGCTACGTGTTGACATAAAACTTTTGCTACTGGCTATCT
CATATCTGTAAATATACAGTATTGGGATTTTTAATGGTCCAAGATTTTGACTATCATCCT
GTTAGTTCACCCGTGTGAAAAGTGAATTTTGGTGATCTCTTCTTCGGAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      AACCCCCCCGTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCG 60
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      ATTCCCCCGCGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCG 120
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      CGAGCAAGTTTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTT 180
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      GCCTAGCGCTGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAAC 240
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      TGGCAATAGCATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGAC 300
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      CAGTACTTGTCAATTGGCCAGCACCGCGCTAAAGGATGGCCGTACCCTCAATGTTATTGA 360
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      TACGCCAGGATTATTTGAAATGACCATTACATCTGAGGATGCCGGTAAAGAAATTGTTAA 420
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      GTGTATGAGTATGGCCAAGGATGGGATACATGCAGTGCTGATGGTTTTTTCTGCCACATC 480
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      TCGTTTTACTCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAA 540
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ------------------------------------------------------------
consensus_14692#0      GATTGTTGATCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATT 600
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ----------------------------------------------------------CC 2
consensus_14692#0      GAAGAGCATGCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAA 660
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      AGAGTTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGANNCAACTTGA 62
consensus_14692#0      CAGAGTTGTTCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGA 720
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      AAATTTNCTTGATGTTGTTGACTCTGTGAATNCAAATAATGGAGGAA-GCCATTTTCAGA 121
consensus_14692#0      AAATTTGCTTGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGA 780
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      TCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACNGGAGGTGCATGATGCTAT 181
consensus_14692#0      TCAAATGCTCGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTAT 840
                                                                                   

consensus_14692#2      ------------------------------------------------------------
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      TGGATATNCAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGA 241
consensus_14692#0      TGGATATACAGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGA 900
                                                                                   

consensus_14692#2      ------------------------GGAGGANAAAGCTGTAAGTAGTCACTGTTGTACAAG 36
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      ACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATA-TCACTGTTG-ACAAG 299
consensus_14692#0      ACAGCTTGCAAACATTACCAACATGGTGGAGGAAAAGCTGAATA-TCACTGTTG-ACAAG 958
                                                                                   

consensus_14692#2      CTGCAACAGCAACTCATGGTAAGAACAGAATGTCANAGGCTAGAAGTCAGAGAGGTTGGC 96
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      CTGCAACAGCAACTCATGG-AAGAACAGAATGC--AAGGCTAGAAG-CAGAGAGGTTGGC 355
consensus_14692#0      CTGCAACAGCAACTCATGG-AAGAACAGAATGC--AAGGCTAGAAG-CAGAGAGGTTGGC 1014
                                                                                   

consensus_14692#2      AGCTGAAGTCTGAGGCTCCGATCAGATGGAGGAGATCTGGCAAGCTGCAAAAAGCGCCTG 156
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      AGCTGAAGCT--AGGCTCCGATCAGATGAGGAGATCC--GCAAGCT-CAAAAAGCGCC-- 408
consensus_14692#0      AGCTGAAGCT--AGGCTCCGATCAGATGAGGAGATCC--GCAAGCT-CAAAAAGCGCC-- 1067
                                                                                   

consensus_14692#2      TCGAGAAGGCCCAACAGAGAAAATGGAGGAATTCACGAAAGATGGCTGTGCTGCGAACAC 216
consensus_14692#3      ------------------------------------------------------------
consensus_14692#1      TCGAGAAGGCCCAACAAGAAAA--TGAGGAATTC-CGAAAGATGGCTTC----------T 455
consensus_14692#0      TCGAGAAGGCCCAACAAGAAAA--TGAGGAATTC-CGAAAGATGGCTTC----------T 1114
                                                                                   

consensus_14692#2      CNATAGTGGTTGCTGATTGCTATGGAGTGAGCTTTGCTCCTAGGATGCAAGCTGCTGGCC 276
consensus_14692#3      ---------TGTTCTATTCCTATG-AGT-ANCTTT-CTCCTAGGAT-CAACTCTC---CC 44
consensus_14692#1      CAACACAAGTGTTCTATT-CTATG-AGT-AGCTTT-CTCCTAGGAT-CAAGCTGCTG-CC 509
consensus_14692#0      CAACACAAGTGTTCTATT-CTATG-AGT-AGCTTT-CTCCTAGGAT-CAAGCTGCTG-CC 1168
                                *     *** ***** *** * **** ********** ***    *   **

consensus_14692#2      ATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTG---TAGGCTACAGTGG 333
consensus_14692#3      ATG-TTGAATCCCGC-----CTTTTAATAGAGTTCNGAC--ATG---TAG-CTACGT--G 90
consensus_14692#1      ATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGT-GG 568
consensus_14692#0      ATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACAGTGCTCTAGGCTATGT-GG 1227
                       *** ****** *  *      * ************ **    **   *** ***     *

consensus_14692#2      TTGACATAAAACTTTTGCTACTGGGCTATGCTCATGATCTGTAAATATACAGGTATTTGG 393
consensus_14692#3      TTGACATAAAACTTTTGCTACTGG-CTAT-CTCAT-ATCTGTAAATATACAG-TATT-GG 145
consensus_14692#1      TTGACATAAAACTTTTGCTACTGGGCTAT-CTCAT-ATCTGTAAATATACAGGTATT-TG 625
consensus_14692#0      TTGACATAAAACTTTTGCTACTGGGCTAT-CTCAT-ATCTGTAAATATACAGGTATT-TG 1284
                       ************************ **** ***** **************** ****  *

consensus_14692#2      GATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCGTGTGAAAAGTG 453
consensus_14692#3      GATTTTTAATGGTCCAAGATTTTGACTATCATCC-TGTTAGTTCACCCGTGTGAAAAGTG 204
consensus_14692#1      GATTTTTAATGTCCAAGGATTTTGACTATCATCCCTGCTAGTTCATCCTTGTGAAAAGTG 685
consensus_14692#0      GATTTTTAATGTCCAAGGATTTTGACTATCAAAAAAAAAAAGA----------------- 1327
                       ***********  * * **************        *                    

consensus_14692#2      AATTTTGGTGATCGTCTTCTTCNGAAAAAAAAAA-------------------------- 487
consensus_14692#3      AATTTTGGTGATC-TCTTCTTCGGAAAA-------------------------------- 231
consensus_14692#1      AATTTTGGTGATCGTCTTCTTCTGAAAAAAATCGTTTCCACAAGTGTTGCAGGCAAGGGA 745
consensus_14692#0      ------------------------------------------------------------
                                                                                   

consensus_14692#2      ------------------------------------------
consensus_14692#3      ------------------------------------------
consensus_14692#1      TCAATGATCCCCTCCTTAAAAAAAAAAAAAAAAAAAAAAAAA 787
consensus_14692#0      ------------------------------------------