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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14703#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1312 fasta sequence
[CCCACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA-TTGGAAC-AGAA-TGCGACCCTAGCATTT-GAAGCAGCAATC-TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA-GAT-GAACGTCA-TTGTAT-CCCACTACCAACATTATCTCGACCTGAT-GGGTGTTGGTAGTGAC-AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACATTCAAACATGCAATGACTGTTGTAAATAAGCATATAATTTCATTGCAGTTTGCTTAGAAAAAAAAAAAAA]
[+] EMBL AK102814 [CCCACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGTAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACAT ]
[+] EMBL AK106190 [ CACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACATTCAAACATGCAA ]
[+] EMBL AK060080 [ CACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACAT ]
[+] EMBL AK104718 [ CACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACAT ]
[+] EMBL AU184509 [ CACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGG ]
[+] EMBL CB654532 [ TCTCTCCTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGA ]
[+] EMBL CB648102 [ TCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCGCATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGCTGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGA ]
[+] EMBL C73571 [ ATATAGTGTCGCAACTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCNGTTGAACCACCCAGAGTTATTTGGAACAAGAATTGCGACCCTAGNATTTGGAAGCAGCAATCTTGGA ]
[-] EMBL CB654533 [ GCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGAAGGGATACATATTACACACTGAAGCAGATAATTCACAATAAAAgga ]
[+] EMBL CA758839 [ GCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTA TTGGAAC AGAA TGCGACCCTAGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACGTGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTATACACTGAAGCAGATAATTCACATTCAAACATGCAATGACTGTTGTAAATAAGCATATAATTTCATTGCAGTTTGCTTAGAAAAAAAA ]
[+] EMBL BE039573 [ AGCATTT GAAGCAGCAATC TGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACGTGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTATACACTGAAGCAGATAATTCACATTCAAACATGCAATGACTGTTGTAAATAAGCATATAATTTCATTGCAGTTTGCTTAGAAAAAAAA ]
[+] EMBL AU184510 [ GTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAA GAT GAACGTCA TTGTAT CCCACTACCAACATTATCTCGACCTGAT GGGTGTTGGTAGTGAC AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACATTCAAAaaaa ]
[+] EMBL AU030373 [ GGCTCCATCGTTAAGGNTGGACCGTCATTTGTATCCCCACTCCCAACATTTTCTCGNCCTGATGGGGTGTTGGTAGTGACNAAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCCCAAGTACCACCTGTGTTTGTTTGCGAAATTTGTAGCCTATTTATGTAAGTGTCCACTATGTTCTCTCATTTATATGTGACAATACATATTACACACTGAAGCAGATAATTCACATTCAAACATGCAATGACTGTTGTAAATAAGCATATAATTTCATTGCNGTTTGCTTNGAAAAAAAAAAAAA]
consensusID : consensus_14703#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 751 fasta sequence
[ACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTATTGGAACAGAATGCGACCCTAGCATTTGAAGCAGCAATCTGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAAGATGAACGTCATTGTATCCCACTACCAACATTATCTCGACCTGATGGGTGTTGGTAGTGACAAAGTTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCTTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCNCCAAGTACCACCTGTGTTTGTTTGCGAAATTGGTAGCCTATTTATGTAAGTGTCCAATATGTTCTCTCATTTATATGTGACAATACATAGTACACACTGAAGCAGATAATTCCCATTCAAACAAAAAAAGGGA]
[-] EMBL CB648103 [ACAACCATGAATTGAGCCCAAGCCAAAGCTATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAGGCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTATTGGAACAGAATGCGACCCTAGCATTTGAAGCAGCAATCTGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAAGATGAACGTCATTGTATCCCACTACCAACATTATCTCGACCTGATGGGTGTTGGTAGTGACAAAGTTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAATTTGGACTCTTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACAGACAGCTAGCTTCCCAAACAAAGAAAAGCGTATACATGGTACTTTTAATAGCTCNCCAAGTACCACCTGTGTTTGTTTGCGAAATTGGTAGCCTATTTATGTAAGTGTCCAATATGTTCTCTCATTTATATGTGACAATACATAGTACACACTGAAGCAGATAATTCCCATTCAAACAAAAAAAGGGA]
[+] EMBL AU030372 [ TGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGGATCTGTTGAACCACCCAGAGTTATTGGAACAGAATGCGACCCTAGCATTTGAAGCAGCAATCTGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTGGCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTACAATGAACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAAGATGNACGTC ]
consensusID : consensus_14703#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence
[CAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGCACAAGGACGGCGGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACCTCGGCCACGTCGGCGCCAAGACCTCCTGTACGTGTGCTGCTCTTCTTCTTCTTCTTCTCGCTGATCGTTACTGTGATTTTACCAATTTGATGTTGCGCGGATCGAGAAATAGATTGGGGGAAATGGACGAATTGGTAGTAGATTTGCGGCCTACTGTAATCTTTAGGATAGGTGCTCTGCGGAGTGTTGCTTTTAAGATCTGAAAGTAATCTGGATCCGTGTGTAGAATGGGAGGTAACAATTTTTTTATCTCAGCTAGTAGTTAATTGCTGCCGAATGCAGCTATATGTGGAGCATGTTAATTAGTTTTGATTGGCATCGTGTATCATCCTTGGCATTTCCATATTAAAAGTAGACAACTGCAAT]
[+] EMBL CA767316 [CAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGCACAAGGACGGCGGCGGCGACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACCTCGGCCACGTCGGCGCCAAGACCTCCTGTACGTGTGCTGCTCTTCTTCTTCTTCTTCTCGCTGATCGTTACTGTGATTTTACCAATTTGATGTTGCGCGGATCGAGAAATAGATTGGGGGAAATGGACGAATTGGTAGTAGATTTGCGGCCTACTGTAATCTTTAGGATAGGTGCTCTGCGGAGTGTTGCTTTTAAGATCTGAAAGTAATCTGGATCCGTGTGTAGAATGGGAGGTAACAATTTTTTTATCTCAGCTAGTAGTTAATTGCTGCCGAATGCAGCTATATGTGGAGCATGTTAATTAGTTTTGATTGGCATCGTGTATCATCCTTGGCATTTCCATATTAAAAGTAGACAACTGCAAT]
consensusID : consensus_14703#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 402 fasta sequence
[GTGCTGACACATGAACATCCTGTANGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAAGATGAACGTCNTTGTGATGCCCNCTACCNACATTATCTCGACCTGATGGGTTGTTGGTAGTGACCAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAGAATTTGGACTCCTAAGCCATCTGTGTTANATAGACGGATAAGTCCCTGNAAATNTGAGGCACAGACAGCNAGCTTCCCCAACCAAGAAAAGCGTGATACATGGTACTTTTAATAGCTCCCCAGTACCACCTGTGNTTGTTTGCGAAATTTGTGAGCCTGATGTTGATGGAATGTGCCACTATGTTCTGCTGCATTGATATGGGGACCATACATATTACNCCT]
[+] EMBL BI805799 [GTGCTGACACATGAACATCCTGTANGGCGATCTCATCTGTGGTCAAGGCTCCATCGATAAGATGAACGTCNTTGTGATGCCCNCTACCNACATTATCTCGACCTGATGGGTTGTTGGTAGTGACCAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAGAATTTGGACTCCTAAGCCATCTGTGTTANATAGACGGATAAGTCCCTGNAAATNTGAGGCACAGACAGCNAGCTTCCCCAACCAAGAAAAGCGTGATACATGGTACTTTTAATAGCTCCCCAGTACCACCTGTGNTTGTTTGCGAAATTTGTGAGCCTGATGTTGATGGAATGTGCCACTATGTTCTGCTGCATTGATATGGGGACCATACATATTACNCCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 CCCACCACCGACACTCTCTCTTCTCCGCTCCTCCTCCGCCGATCACGCGCTCCGCATCCG 60
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 CATCGCCGGCGACGATGAGGACGTCGCGTGCGGCGGCGGCGGCGGCATCTCTGCCGCTGC 120
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 TGCTGCTGGTGGCGCTACTCGTGGCGGCGGAGGGGAGGAGGCACAAGGACGGCAGCGGCG 180
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 ACGAGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCCGGTTCTGCTGCA 240
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 ACGACACCATCACCGACTACTTCAAGGCGTACCAGTTCGAGGAGCTCTTCGCCCACCGCA 300
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 ACGACCGCTCGCTCGCCCACGCCGCCGGGTTCTGGGACTACCACGCCTTCATCACCGCCG 360
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 CCGCGCTCTTCGAGCCCCGCGGGTTCGGCACCACGGGAGGGAAGGAGGTTGGGATGAAGG 420
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------------------------------------
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 AGGTCGCCGCCTTCCTCGGCCACGTCGGCGCCAAGACCTCCTGTGGATATAGTGTCGCAA 480
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ------------------------------ACAACCATGAATTGAGCCCAAGCCAAAGCT 30
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 CTGGTGGTCCATTGGCTTGGGGGCTTTGCTACAACCATGAATTGAGCCCAAGCCAAAGCT 540
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 ATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAG 90
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 ATTGTGACAACAGCAACGAATTGTATCCTTGTGTTGAAGGAGTCGAGTATTATGGTCGAG 600
consensus_14703#2 -------CAGCGGGAGCCGGTTCTGCTGCAACGACACCATCACCGACTACTTCAAGGCGT 53
consensus_14703#1 GCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGG 150
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 GCGCTCTTCCTGTTTACTGGAACTACAACTATGGTATTATCGGTCAGGGTATCAAACAGG 660
consensus_14703#2 ACCAGTTCGAGGAGCTCTTCGCCCACCGCAACGACCGC-TCGCTCGCCCACGCCGCCGGG 112
consensus_14703#1 ATCTGTTGAACCACCCAGAGTTATTGGAACAGAATGCGACCCTAGCATTTGAAGCAGCAA 210
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 ATCTGTTGAACCACCCAGAGTTATTGGAACAGAATGCGACCCTAGCATTTGAAGCAGCAA 720
consensus_14703#2 TTCTG--GGACTACCACGCCTTCATCACCGCCGCCGCGCTCTTCGAGCCCCGCGGGTTCG 170
consensus_14703#1 TCTGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTG 270
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 TCTGGAGGTGGATGACTCCAATGAAGAGGAAGCAACCATCAGCCCATGATGTATTCGTTG 780
consensus_14703#2 GCACCACGGGAGGGAAGGAGGTTGGGATGAAGGAGGCACAAG--GACGGCGGCGGCGACG 228
consensus_14703#1 GCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTA 330
consensus_14703#3 ---------------------------------------------------GTGCTGACA 9
consensus_14703#0 GCAACTGGAAACCAACCAAGAATGACACTTTGTCCAAGAGGTATCCTGGCTTTGGTGCTA 840
consensus_14703#2 AGGAGGCGAAGGCGTGCGACAAGGGGTGGGAGTGCAGCGGGAGCC--GGTTCTGCTGCAA 286
** ** *
consensus_14703#1 CAATG--AACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCC-ATCGATAAGATGA 387
consensus_14703#3 CA-TG--AACATCCTGTANGGCGATCTCATCTGTGGTCAAGGCTCC-ATCGATAAGATGA 65
consensus_14703#0 CAATG--AACATCCTGTATGGCGATCTCATCTGTGGTCAAGGCTCC-ATCGATAAGATGA 897
consensus_14703#2 CGACACCATCACCGACTACCTCGGCCACGTCGGCGCCAAGACCTCCTGTACGTGTGCTGC 346
* * ** * ** ** * * ** * * * **** * * * **
consensus_14703#1 ACGTCATTGTA--TCCCACTACCAACATTATCTCGACCTGATGGGT-GTTGGTAGTG-AC 443
consensus_14703#3 ACGTCNTTGTGATGCCCNCTACCNACATTATCTCGACCTGATGGGTTGTTGGTAGTG-AC 124
consensus_14703#0 ACGTCATTGTA--TCCCACTACCAACATTATCTCGACCTGATGGGT-GTTGGTAGTG-AC 953
consensus_14703#2 TCTTCTTCTTCTTCTTCTCGCTGATCGTTACTGTGATTTTACCAAT--TTGATGTTGCGC 404
* ** * * * * * *** ** * * * *** * ** *
consensus_14703#1 AAAGTTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAAT 503
consensus_14703#3 CAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAA-GAAT 183
consensus_14703#0 AAAGCTGGAGATAACTTGGATTGTGCTGACCAGGTGGCGTTCAATCCATCCTCAAAGAAT 1013
consensus_14703#2 GGATCGAGAAATAGATTGGGGGAAATGGACGAATTGGTAGTAGATTTGCGGCCTA----- 459
* ** *** **** *** * *** * ** * *
consensus_14703#1 TTGGACTCTTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACA 563
consensus_14703#3 TTGGACTCCTAAGCCATCTGTGTTANATAGACGGATAAGTCCCTGNAAATNTGAGGCACA 243
consensus_14703#0 TTGGACTCCTAAGCAATCTGTGTTATATAGACGGATAATTCCCTGTAAATTTGAGGCACA 1073
consensus_14703#2 CTGTAATCTTTAG-GATAGGTGCTCTGCGGAGTGTT--GCTTTTAAGATCTGAAAGTAAT 516
** * ** * ** ** *** * ** * * * * * * *
consensus_14703#1 GACAGCTAGCTTCCCAAACAAAGAAAAGCGT-ATACATGGTACTTTTAATAGCTCNCCAA 622
consensus_14703#3 GACAGCNAGCTTCCCCAACCAAGAAAAGCGTGATACATGGTACTTTTAATAGCTCCCCA- 302
consensus_14703#0 GACAGCTAGCTTCCCAAACAAAGAAAAGCGT-ATACATGGTACTTTTAATAGCTCCCAA- 1131
consensus_14703#2 CTGGATCCGTGTGTAGAATGGGAGGTAACAATTTTTTTATCTCAGCTAGTAGTTAATTG- 575
* * ** * * * * * ** *** *
consensus_14703#1 GTACCACCTGTGTTTGTTTGCGAAATTGGT-AGCCT---ATTTATGTAAGTGTCCAATAT 678
consensus_14703#3 GTACCACCTGTGNTTGTTTGCGAAATTTGTGAGCCTGATGTTGATGGAATGTGCCACTAT 362
consensus_14703#0 GTACCACCTGTGTTTGTTTGCGAAATTTGT-AGCCT---ATTTATGTAAGTGTCCACTAT 1187
consensus_14703#2 CTGCCGAATGCAGCTATATGTGGAGCATGTTAATTA---GTTTTGATTGGCATCGTGTAT 632
* ** ** * * ** * * ** * ** * ***
consensus_14703#1 GTTCTCT--CATTTATATGTG-ACAATACATAGTACACACTGAAGCAGATAATTCCCATT 735
consensus_14703#3 GTTCTGCTGCATTGATATGGGGACCATACATATTACNCCT-------------------- 402
consensus_14703#0 GTTCTCT--CATTTATATGTG-ACAATACATATTACACACTGAAGCAGATAATTCACATT 1244
consensus_14703#2 CATCCTTGGCATTTCCATATTAAAAGTAGACAACTGCAAT-------------------- 672
** **** ** * ** * *
consensus_14703#1 CAAACAAAAAAAGGGA-------------------------------------------- 751
consensus_14703#3 ------------------------------------------------------------
consensus_14703#0 CAAACATGCAATGACTGTTGTAAATAAGCATATAATTTCATTGCAGTTTGCTTAGAAAAA 1304
consensus_14703#2 ------------------------------------------------------------
consensus_14703#1 --------
consensus_14703#3 --------
consensus_14703#0 AAAAAAAA 1312
consensus_14703#2 --------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||