cluster # 14704

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Oryza sativa
cluster # 14704 cluster # 14704 Sequences # 17 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14704#0 length = 1131 sequences # 13
consensus_14704#1 length = 566 sequences # 1

consensus_14704#2 length = 333 sequences # 1
consensus_14704#3 length = 274 sequences # 1
consensus_14704#4 length = 187 sequences # 1

consensusID : consensus_14704#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1131
fasta sequence

                              [GCGGCGTCGCCGACGCCGGCGGCCCTCGCGCCGCCGCGCCATGACCGGCGCGCCTTTCTTTTCTCTTCTTCTCCGCTCCCCCCACCGTCTCTAACCCCCACCGTGTGAGAGAGAGATGGCGGCGGCCGAAAAGACGGAGATGGCGGCGCCGCCGCGGGCTCCCTCGCCGGTGCGCGCGTGCACCGGCAGGTG-CGCGCACGGCCGTCGAGTGGCTCCTCGGTGGTGCCCTTTGCCCTCCCCCCTTTTGCCGGCGACGGCCGGCG-ACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC-TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTGCACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC-TAATAATATTTTATTATAAATTAAGTTGTGTTTGATAAAAAATAATATCATTGAATTGGATTGAAAAA]

[+] EMBL CB661508             [GCGGCGTCGCCGACGCCGGCGGCCCTCGCGCCGCCGCGCCATGACCGGCGCGCCTTTCTTTTCTCTTCTTCTCCGCTCCCCCCACCGTCTCTAACCCCCACCGTGTGAGAGAGAGATGGCGGCGGCCGAAAAGACGGAGATGGCGGCGCCGCCGCGGGCTCCCTCGCCGGTGCGCGCGTGCACCGGCAGGTG CGCGCACGGCCGTCGAGTGGCTCCTCGGTGGTGCCCTTTGCCCTCCCCCCTTTTGCCGGCGACGGCCGGCG ACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTGCACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BE230753             [                                                                                                                                                     cgagGCGVGCTCCCTCGCCGGTGCGCGCGTRCACC GCAGGCGVCGC AACGGCCGTCGAGTGGCTCCTCGGTGGTGCCCTTTGCCCTCCCCCCTTTTGCCGGCGAC GCCGGCGAACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGYTGATCATCATGGRGTACCTCGACGAGGTTTTCCCGGACACCGCCGCACCTTTCTTCCGCGCCGACCTGCACGRCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BP185011             [                                                                                                                                                                                                                                                  acgagGCCGGCGACGGCCGGCG ACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTGCACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAA                                                                                                                                                                                    ]
[+] EMBL AF309380             [                                                                                                                                                                                                                                                                       c gCAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTGCACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATATTTTATTATAAATTAAGTTGTGTTTGATAAAAAAAAAaa                     ]
[+] EMBL OSC24211             [                                                                                                                                                                                                                                                                                   GAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACAACGNCGCACCTNTTCTNCCCGNCGACCTGCACGACCGNGCCGTCGTTNGTTTTTGGGCCG CTAATTTNACGnaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OS2804A              [                                                                                                                                                                                                                                                                                   GAGCTGAAGCTGCTGGGAACATGGGCGAGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACC TCAAGGGCCTTAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGGCGCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB661509             [                                                                                                                                                                                                                                                                                                                                       TCGCCCTCCACCTTCAAGGGCCTGAGCTACGAGTACGTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTGCACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATCATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTGCACGACCGCGCCGTCGCTCGCTTTTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTCTTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATA                                                            ]
[+] EMBL OSR11571A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCCCTCGTGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATGCTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTCTTCGGCGGCGACG CTCCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTNTGGCGCCAAGATCTTGGACGCNGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGG                                                                                                                                                                                                                                                                             ]
[+] EMBL AU184114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACATAATAATATTTTATTATAAATTAAGTTGTGTTTGATAAAAA                           ]
[+] EMBL CF326979             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAA TGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATATTTTATTATAAATTAAaaaa                                        ]
[-] EMBL CF326980             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAA TGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATATTTTATTATAAATTAAaaaaa                                       ]
[-] EMBL CF330701             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATATTTTATTATAAATTAAGTTGTGTTTGATAAAAAATAATATCATTGAATTGGATTGAAAAA]
[+] EMBL CF330702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC TAATAATATTTTATTATAAATTAAGTTGTGTTTGATAAAAAATAATATCATTGAATTGGATTGAAAA ]




>consensus_14704#0
GCGGCGTCGCCGACGCCGGCGGCCCTCGCGCCGCCGCGCCATGACCGGCGCGCCTTTCTT
TTCTCTTCTTCTCCGCTCCCCCCACCGTCTCTAACCCCCACCGTGTGAGAGAGAGATGGC
GGCGGCCGAAAAGACGGAGATGGCGGCGCCGCCGCGGGCTCCCTCGCCGGTGCGCGCGTG
CACCGGCAGGTGCGCGCACGGCCGTCGAGTGGCTCCTCGGTGGTGCCCTTTGCCCTCCCC
CCTTTTGCCGGCGACGGCCGGCGACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCG
AGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACCTCAAGGGCCTGAGCTACGAGTAC
GTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTG
CACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATC
ATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTG
CACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCG
TGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATG
CTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTC
TTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCCTGGTTG
CACGGGACAGAGGAGCTGTGTGGCGCCAAGATCTTGGACGCCGCCAAGACCCCGCTCCTG
TCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGGCTTTGCCGGACGTC
TGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCAGCT
ACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAG
TGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACTAATAATATTTTATTAT
AAATTAAGTTGTGTTTGATAAAAAATAATATCATTGAATTGGATTGAAAAA

consensusID : consensus_14704#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAGCGGAAATACGGGTGAGGATAAGGCAGAGGGGATGCGTCATATGCTCGCGTCGGTGGATGCGCTGGAGGCGGCGATGGTGTGGTCCTACGAGGGTAAGCCCTTCTTCGGTGGCGACGCCGTCGTGTTCCTGGACGTCTCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACTGAGGAGCTGTGTGGCGCCGAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGTGCGCGGCGCTTCTGCGATATGGACGCCGCCNAGGTGGCTATGCCGCACGTCTGNCAGCTGGTCGAGTTTGCCTAGATGACACGTGTTCACCTGTACGCTGCAATGACAGCTACNACAGTTTCCCGCATCTGAATGTGTTGTCAGGTTTGTTGTGTGATGTGTTCCTCNAGTGCATAACCGTACTTTAAATTTAAATACTNNNNAAAAAAANAAAAAAAAATTANNNNNNNNNGGNNNNNNCCTTCGGGGGGGGGCCGGCCCCATTTCCCCCTTTG]

[+] EMBL CA754474             [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAGCGGAAATACGGGTGAGGATAAGGCAGAGGGGATGCGTCATATGCTCGCGTCGGTGGATGCGCTGGAGGCGGCGATGGTGTGGTCCTACGAGGGTAAGCCCTTCTTCGGTGGCGACGCCGTCGTGTTCCTGGACGTCTCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACTGAGGAGCTGTGTGGCGCCGAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGTGCGCGGCGCTTCTGCGATATGGACGCCGCCNAGGTGGCTATGCCGCACGTCTGNCAGCTGGTCGAGTTTGCCTAGATGACACGTGTTCACCTGTACGCTGCAATGACAGCTACNACAGTTTCCCGCATCTGAATGTGTTGTCAGGTTTGTTGTGTGATGTGTTCCTCNAGTGCATAACCGTACTTTAAATTTAAATACTNNNNAAAAAAANAAAAAAAAATTANNNNNNNNNGGNNNNNNCCTTCGGGGGGGGGCCGGCCCCATTTCCCCCTTTG]




>consensus_14704#1
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCAGC
GGAAATACGGGTGAGGATAAGGCAGAGGGGATGCGTCATATGCTCGCGTCGGTGGATGCG
CTGGAGGCGGCGATGGTGTGGTCCTACGAGGGTAAGCCCTTCTTCGGTGGCGACGCCGTC
GTGTTCCTGGACGTCTCGCTGGGGGGCTTGCTCTCCTGGTTGCACGGGACTGAGGAGCTG
TGTGGCGCCGAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGTGCGCGGCGC
TTCTGCGATATGGACGCCGCCNAGGTGGCTATGCCGCACGTCTGNCAGCTGGTCGAGTTT
GCCTAGATGACACGTGTTCACCTGTACGCTGCAATGACAGCTACNACAGTTTCCCGCATC
TGAATGTGTTGTCAGGTTTGTTGTGTGATGTGTTCCTCNAGTGCATAACCGTACTTTAAA
TTTAAATACTNNNNAAAAAAANAAAAAAAAATTANNNNNNNNNGGNNNNNNCCTTCGGGG
GGGGGCCGGCCCCATTTCCCCCTTTG

consensusID : consensus_14704#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 333
fasta sequence

                              [CCTTGCTCCCCCTGGTTGCACGGGACAAAGGAGCTGTGTGNCGCNAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGATGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACTAATAATATTTTATTATAAAAAAAAAAAAAAAA]

[+] EMBL C97207               [CCTTGCTCCCCCTGGTTGCACGGGACAAAGGAGCTGTGTGNCGCNAAGATCTTGGACGCCGCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAGGTGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGATGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGTTGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACTAATAATATTTTATTATAAAAAAAAAAAAAAAA]




>consensus_14704#2
CCTTGCTCCCCCTGGTTGCACGGGACAAAGGAGCTGTGTGNCGCNAAGATCTTGGACGCC
GCCAAGACCCCGCTCCTGTCGGCGTGGGCGCGGCGCTTCGGCGAGATGGACGCCGCCAAG
GTGCTTTGCCGGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGG
ATGCTGCAATGGCAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTTGTTGTGT
TGATGTGTTCCTACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGAC
TAATAATATTTTATTATAAAAAAAAAAAAAAAA

consensusID : consensus_14704#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 274
fasta sequence

                              [TCAGGCCCTTGAGGTGGAGGGCGAGCTTCACTCTGGAGACGTCGGGGCTCGCCCATGTTCCCAGCAGCTTCAGCTCACCTTCTGCGGCCATTTCGGTAGGACTAATTAGGAGTATTAATCTGCTGCTCTGAACTTCAATTATTCAGATTAATTGTGCTTGTTTGGTGTCGAGATCGCCTTGAGTAGAGGTATAAATATGCAGCGAGGGAAAAGGCACGAAACATTACAATGCATCATCCATGACGCTCATGCTATAACGTTTGATGGATATGAT]

[+] EMBL CA305613             [TCAGGCCCTTGAGGTGGAGGGCGAGCTTCACTCTGGAGACGTCGGGGCTCGCCCATGTTCCCAGCAGCTTCAGCTCACCTTCTGCGGCCATTTCGGTAGGACTAATTAGGAGTATTAATCTGCTGCTCTGAACTTCAATTATTCAGATTAATTGTGCTTGTTTGGTGTCGAGATCGCCTTGAGTAGAGGTATAAATATGCAGCGAGGGAAAAGGCACGAAACATTACAATGCATCATCCATGACGCTCATGCTATAACGTTTGATGGATATGAT]




>consensus_14704#3
TCAGGCCCTTGAGGTGGAGGGCGAGCTTCACTCTGGAGACGTCGGGGCTCGCCCATGTTC
CCAGCAGCTTCAGCTCACCTTCTGCGGCCATTTCGGTAGGACTAATTAGGAGTATTAATC
TGCTGCTCTGAACTTCAATTATTCAGATTAATTGTGCTTGTTTGGTGTCGAGATCGCCTT
GAGTAGAGGTATAAATATGCAGCGAGGGAAAAGGCACGAAACATTACAATGCATCATCCA
TGACGCTCATGCTATAACGTTTGATGGATATGAT

consensusID : consensus_14704#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 187
fasta sequence

                              [AGGAGCTGTGTNGCNCCAAGATCTTGGACNCGCCAAGACCCCGCTCCTGTCGGCGTGGGCCNGCGCTTCGCGAGATGGACGGCAAGGTGCTTTGCGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCCAGTACAACAGTTTCCCGCAACTGAATGTG]

[+] EMBL D42660               [AGGAGCTGTGTNGCNCCAAGATCTTGGACNCGCCAAGACCCCGCTCCTGTCGGCGTGGGCCNGCGCTTCGCGAGATGGACGGCAAGGTGCTTTGCGACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCCAGTACAACAGTTTCCCGCAACTGAATGTG]




>consensus_14704#4
AGGAGCTGTGTNGCNCCAAGATCTTGGACNCGCCAAGACCCCGCTCCTGTCGGCGTGGGC
CNGCGCTTCGCGAGATGGACGGCAAGGTGCTTTGCGACGTCTGCAAGCTGGTCGAGTTTG
CCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGGCCAGTACAACAGTTTCCCGCAACT
GAATGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14704#0      GCGGCGTCGCCGACGCCGGCGGCCCTCGCGCCGCCGCGCCATGACCGGCGCGCCTTTCTT 60
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      TTCTCTTCTTCTCCGCTCCCCCCACCGTCTCTAACCCCCACCGTGTGAGAGAGAGATGGC 120
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      GGCGGCCGAAAAGACGGAGATGGCGGCGCCGCCGCGGGCTCCCTCGCCGGTGCGCGCGTG 180
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      CACCGGCAGGTGCGCGCACGGCCGTCGAGTGGCTCCTCGGTGGTGCCCTTTGCCCTCCCC 240
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      CCTTTTGCCGGCGACGGCCGGCGACAAGAAGGTGAGCTGAAGCTGCTGGGAACATGGGCG 300
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      AGCCCCTACGTCTCCAGAGTGAAGCTCGCCCTCCACCTCAAGGGCCTGAGCTACGAGTAC 360
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      GTCGTCGAGGAGGATCACTTCAACAACAAGAGCGAGCTCCTCCTCAGCTCCAACCCGGTG 420
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      CACAAGAAGGTCCCCGTGATGATCCACAACGGCAAGCCCATCTGCGAGTCGCTGATCATC 480
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      ATGGAGTACCTCGACGAGGCTTTCCCCGACACCGCCGCACCTCTCCTCCCCGCCGACCTG 540
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------------------------------------------------
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      CACGACCGCGCCGTCGCTCGCTTCTGGGCCGCCTACATTGACGACAAGCTAGTGCCCTCG 600
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      ------------------GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 42
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      TGGAAGCAGGCGTTCAGCGGAAAGACGGGTGAGGAGAAGGCAGAGGGGATGCGTCATATG 660
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      GAGAGAGAGAGGTTCAGCGGAAATACGGGTGAGGATAAGGCAGAGGGGATGCGTCATATG 102
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      CTCGCGGCGGTGGATGCGCTGGAGGCGGCGATGGAGTGGTCCTACAAGGGGAAGCCCTTC 720
consensus_14704#2      ------------------------------------------------------------
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      CTCGCGTCGGTGGATGCGCTGGAGGCGGCGATGGTGTGGTCCTACGAGGGTAAGCCCTTC 162
consensus_14704#3      ------------------------------------------------------------
                                                                                   

consensus_14704#0      TTCGGCGGCGACGCCGTCGGGTTCCTGGACGTCGCGCTGGGGGGCTTGCTCTCC-TGGTT 779
consensus_14704#2      -------------------------------------------CCTTGCTCCCCCTGGTT 17
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      TTCGGTGGCGACGCCGTCGTGTTCCTGGACGTCTCGCTGGGGGGCTTGCTCTCC-TGGTT 221
consensus_14704#3      ------------------------------------------------------TCAGGC 6
                                                                                   

consensus_14704#0      GCACGGGACAGAGGAGCTGTGTGGCGCCA-AGATCTTGGACGCCGCCAAGACCCCGCTCC 838
consensus_14704#2      GCACGGGACAAAGGAGCTGTGTGNCGCNA-AGATCTTGGACGCCGCCAAGACCCCGCTCC 76
consensus_14704#4      -----------AGGAGCTGTGTNGCNCCA-AGATCTTGGACNC-GCCAAGACCCCGCTCC 47
consensus_14704#1      GCACGGGACTGAGGAGCTGTGTGGCGCCG-AGATCTTGGACGCCGCCAAGACCCCGCTCC 280
consensus_14704#3      CCTTGAGGTGGAGGGCGAGCTTCACTCTGGAGACGTCGGGGCTCGCC-----CATGTTCC 61
                                  ***    *  *  * *   ***  * **     ***     *  * ***

consensus_14704#0      TGTCGGCGTGGGCGCGGCGCTT-CGGCGAGATGGACGCCGCCAA--GGTGGCTTTGCCGG 895
consensus_14704#2      TGTCGGCGTGGGCGCGGCGCTT-CGGCGAGATGGACGCCGCCAA--GGTG-CTTTGCCGG 132
consensus_14704#4      TGTCGGCGTGGGC-CNGCGCTT-CG-CGAGATGGACGG---CAA--GGTG-CTTTGC--G 96
consensus_14704#1      TGTCGGCGTGTGCGCGGCGCTT-CTGCGATATGGACGCCGCCNA--GGTGGCTATGCCGC 337
consensus_14704#3      CAGCAGCTTCAGCTCACCTTCTGCGGCCATTTCGGTAGGACTAATTAGGAGTATTAATCT 121
                          * ** *  ** *  *   * *  * *  * *         *   *      *     

consensus_14704#0      ACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGG 955
consensus_14704#2      ACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGATGCTGCAATGG 192
consensus_14704#4      ACGTCTGCAAGCTGGTCGAGTTTGCCAAGATGAAGCGTGTTCAGCTGGAGGCTGCAATGG 156
consensus_14704#1      ACGTCTGNCAGCTGGTCGAGTTTGCCTAGATGACACGTGTTCACCTGTACGCTGCAATGA 397
consensus_14704#3      GCTGCTCTGAACT--TCAA--TTATTCAGATTAATTGTGCTTGTTTGG-TGTCGAGATCG 176
                        *  **   * **  ** *  **    **** *   *** *    **   *  *  **  

consensus_14704#0      CAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTT-GTTGTGTTGATGTGTTCC 1014
consensus_14704#2      CAGCTACAACAGTTTCCCGCAACTGAATGTGTTGTCAGGTT-GTTGTGTTGATGTGTTCC 251
consensus_14704#4      CCAGTACAACAGTTTCCCGCAACTGAATGTG----------------------------- 187
consensus_14704#1      CAGCTACNACAGTTTCCCGCATCTGAATGTGTTGTCAGGTTTGTTGTGT-GATGTGTTCC 456
consensus_14704#3      CCTTGAGTAGAGGTATAAATATGC-AGCGAGGGAAAAGGCACGAAACATTACAATGCATC 235
                       *    *  * ** *      *    *  * *                             

consensus_14704#0      TACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACTAATAATATTT 1074
consensus_14704#2      TACAAGTGAATAAACCGTACTTTAAAATTTAAATAACTAAATATTTGACTAATAATATTT 311
consensus_14704#4      ------------------------------------------------------------
consensus_14704#1      T-CNAGTGCATAA-CCGTACTTTAAA-TTTAAATACTNNNNAAAAAAANAAAAAAAAATT 513
consensus_14704#3      ATCCATGACGC---TCATGCTATAACGTTTGATGGATATGAT------------------ 274
                                                                                   

consensus_14704#0      TATTATAAATTAAGTTGTGTTTGATAAAAAATAATATCATTGAATTGGATTGAAAAA 1131
consensus_14704#2      TATTATAAAAAAAA---------AAAAAAAA-------------------------- 333
consensus_14704#4      ---------------------------------------------------------
consensus_14704#1      ANNNNNNNNNGGNNNNNNCCTTCGGGGGGGGGCCGGCCCCATTTCCCCCTTTG---- 566
consensus_14704#3      ---------------------------------------------------------