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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1538 fasta sequence
[TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCGGTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTCTTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAGGAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAGGCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTGCAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCCATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACGGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCAT-GGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATG-TGGCCTGCAAGA-TTGCGAGAAATTGC-TTAAGC-GGGCGGGCAGCTTCCAAGTACCCAGAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA]
[+] EMBL AK068272 [TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCGGTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTCTTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAGGAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAGGCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTGCAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCCATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACGGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCAT GGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATG TGGCCTGCAAGA TTGCGAGAAATTGC TTAAGC GGGCGGGCAGCTTCCAAGTACCCAGAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCAT ]
[+] EMBL C91732 [ tngnanGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCAGCGTGCGTGTCGAAGNGNGCGGTGTCGGTGATCGGGCGCC GAAGGAGATt ]
[+] EMBL C73034 [ GGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCATGGGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATGTTGGCCTGCAAGATTTTCGAGAAATTGCNTTAAGCGGGGCGGGCAACTTTCAAGTAACCAGAATCCGTCTNCGGG ]
[+] EMBL AU172623 [ CAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA]
consensusID : consensus_14790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1426 fasta sequence
[CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGG-GGCGG-CGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAA-CGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGAGGCGTTCGCCGCGCCGGCGAAC-GGGGAGGTTGCGGCGGCG-AGGTGTGAC-TTCTACGGGGTGTTCGACGGGCACGGCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCACGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG-TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT-GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC-AAGATTATTTGAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK063334 [CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGGCGGCGG CGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAAGCGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGAGGCGTTCGCCGCGCCGGCGAAC GGGGAGGTTGCGGCGGCG AGGTGTGAC TTCTACGGGGTGTTCGACGGGCACGGCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCACGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCT GTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATG ]
[+] EMBL AU163499 [ TGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGG NGCGGACGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAA CGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGANGCGTTCGCCGCGCCGGCGAACGGGGGAAGTTNCGGCGGCGAAGTTTTGACTTTCTACG ]
[+] EMBL AU164301 [ GCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGA G GGCGG CGGGCGGGAGTNGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTTGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTTGTGGTGANGCCGGGTTGGTGGTGGTGGCGAA CGGCACGGGGCGGCGTCGGTC NCGGGAAGAGGAATGAAANGGAGGACG ]
[+] EMBL AU163500 [ CGGATGCACGAGCTCNTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGA NTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAG ]
[+] EMBL AU165833 [ cgcggtGCGGCCG GTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTANGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTTGGGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC A ]
[+] EMBL AU161440 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGCAAAGATTATTTGAA ]
[+] EMBL AU161468 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATTATTTGA ]
[+] EMBL AU093334 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTT ]
[+] EMBL OSC1760A [ GCAGGTGGAACTTCGACGAGTGCCTCATNCTCGCCAGCNACGGCCTCTGGGNCGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTNCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACG CTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTC ]
[+] EMBL CF303839 [ GCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATT ]
[+] EMBL CF303424 [ GCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAA ]
[+] EMBL C97715 [ GCCTTGTTAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATANTAGCTAAGCTAATGGTTCTACTAANCTTTTTTTTTCANTTCCCTTGTGTTNAAAANCATTTTTTTTCTCTTCTAANTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGANCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATTATTTGAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14790#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 321 fasta sequence
[GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF309964 [GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF312508 [GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTAA A AAAAAAAAAAAAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14790#0 TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATG 60
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGG 120
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 AGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGAC 180
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAG 240
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCG 300
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTC 360
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 TTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAG 420
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAG 480
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTG 540
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 CAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCC 600
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 ATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACG 660
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTC 720
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTC 780
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 TCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGC 840
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 AGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATT 900
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 GGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCATGGACAGG 960
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ------------------------------------------------------------
consensus_14790#0 ACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAAC 1020
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 --------CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCC 52
consensus_14790#0 GATGTGGCCTGCAAGATTGCGAGAAATTGCTTAAGCGGGCGGGCAGCTTCCAAGTACCCA 1080
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 GGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGT 112
consensus_14790#0 GAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATC 1140
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGGGGCGGCGGGCGGGAGTT 172
consensus_14790#0 TCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGT 1200
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 GAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCC 232
consensus_14790#0 AGAACGACGGCGAGCAAAGAGAACGGTAGGTAG--CGTGTAGAAGTTGG-AGCGGCTGTC 1257
consensus_14790#2 -------------GCAAAGAGAACGGTAGGTAG--CGTGTAGAAGTTGG-AGCGGCTGTC 44
consensus_14790#1 GCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAACGGC 292
* * * ** *** * ** ** ** * * *** *** * *
consensus_14790#0 ACAGCAT----TTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTG 1313
consensus_14790#2 ACAGCAT----TTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTG 100
consensus_14790#1 ACGGGGCGGCGTCGGTCGCCGGGAG-GAGGAGGGAGATGGAGGAC--GCCGTGTCGCTGC 349
** * * * * * *** ***** * ** * ***** ** * * *
consensus_14790#0 CTGGGATGTTTGTAAAGA-GAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGAT 1372
consensus_14790#2 CTGGGATGTTTGTAAAGA-GAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGAT 159
consensus_14790#1 GCGAGGCGTTCGCCGCGCCGGCGAACGGGGAGGTTGCGGCGGCGA-GGTGTGACTTCTAC 408
* * *** * * * * *** ** ** * * * * ** * *
consensus_14790#0 GTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGA--GATGC-TGTATTGCGTTGAGTT- 1428
consensus_14790#2 GTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGA--GATGC-TGTATTGCGTTGAGTT- 215
consensus_14790#1 GGGGTGTTCGACGGGCACG-GCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCA 467
* *** *** * ** * *** * * * ** ** ** ** * * * **
consensus_14790#0 -GGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCA-TGAAGCATGTGCTGAT 1486
consensus_14790#2 -GGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCA-TGAAGCATGTGCTGAT 273
consensus_14790#1 CGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGC 527
* * ** * * * * * * *** ** * ** * ** *
consensus_14790#0 TTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA-------- 1538
consensus_14790#2 TTCGTCTGTTCTGATCATTGGTTAAAAAAAAA----AAAAAAAAAAAAAAAA-------- 321
consensus_14790#1 GTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGG 587
** * ** ** * * *
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTC 647
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTC 707
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGA 767
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGG 827
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCC 887
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCT 947
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGC 1007
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 GCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGAC 1067
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCG 1127
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 GCGAGGCAACGCCTTGTAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGT 1187
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 ATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGT 1247
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 TAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCA 1307
consensus_14790#0 ------------------------------------------------------------
consensus_14790#2 ------------------------------------------------------------
consensus_14790#1 CATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTTGGTGTAACCAGAATTTCATCTGGA 1367
consensus_14790#0 -----------------------------------------------------------
consensus_14790#2 -----------------------------------------------------------
consensus_14790#1 TACCAACTGAAATGAAATGAATATTAAGCAAGATTATTTGAAAAAAAAAAAAAAAAAAA 1426
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||