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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14791#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1915 fasta sequence
[GTTACACTTCACAGCTTTATTTTGTGAACGCCATTTAGTTTATTTTACTCGGCCTGCATAGCGGAGAGGTAGCGAGAATGCTAGATAGATATCTGGAGTCGTCGTCGTCGTCGTCGTCGACTTGTCATCCATAGCCATTGACGACGACGAGCTCTACTATCAATCGATCGATCGAGTTCTCGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGACAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGTCGGCCGGAACAAGGCCGTC-GACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTC-GCTAGTCGGCCCCCTCGTCGCCGTCCTCGGCGGCGCGCTCGAGTTCGCCCTCAACCTCGCCAGCAACGTCCTCCATGGGAGAATGGAGTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGTTGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCATGGCGTCCAAGGTGGCGTACGAGAACGAGGCGTTCATCCGCGACGTCGTCACCCGCCGCTGGCAGATGGAGTTCGTCCAGTTCTTCAACTGCTGGAACGAGTTCGAGAACGCGTACACGGCGCAGGCGTTCGTGTTCTGCGACAAGGCGGCGGACGCGGAGCTGGTGGTGGTGGCGTTCCGGGGCACGCCGGCGCTGGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTACTACGCCATCCGCGACGCCGTGAAGCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCTGGTCGCCGGGCATGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCGCGACGGTGCTGGCGTACCACAAGGAGAAGGCGGCGCTGGACCGGCTCGCCGGCGTGTACACCTTCGGGCAGCCGCGGGTCGGCGACGCCATGCTCGCCATGTTCGCCGAGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCAAGGTGGTGAAGGAGTT-GCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCAT-CAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCT-ACTG-CCGGG-AAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCG-TTCCACAGGGT-GCAGGACTACGTCAATGCCGTCACGC-TCGCCGGC-TCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTC-ACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACAAGTACTACTAGTATAACTATGAGAAGATAAATAATTGAAGTTACACAAAAAAGAA]
[+] EMBL CB684484 [GTTACACTTCACAGCTTTATTTTGTGAACGCCATTTAGTTTATTTTACTCGGCCTGCATAGCGGAGAGGTAGCGAGAATGCTAGATAGATATCTGGAGTCGTCGTCGTCGTCGTCGTCGACTTGTCATCCATAGCCATTGACGACGACGAGCTCTACTATCAATCGATCGATCGAGTTCTCGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGACAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGACGGCCGGAACAAGGCCGTCTGACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAGCCTCCTCCTGCAGCTCTTCCTCCTCTC GCTAGTCGGCCCCCTCGTCGCCGTCCTCGGCGGCGCGCTCGAGTTCGCCCTCTACCTCGCCAGCAACGTCCTCCATGGGAGAATGGAGTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGTTGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCATGGCGTCCAAGGTGGCGTACGAGAACTATGCGTTCATCCGCGACGTCGTCACCCGCCGCTGGAAGATGGAGTTCGTCCAGTTCTTCAACTG ]
[+] EMBL AU056750 [ GAATGCTAGATAGATATCTGGAGTCGTCGTCGTCGTCGTCGTCGACTTGTCATCCATAGCCATTGACGACGACGAGCTCTACTAGCAATCGATCGATCGAGTTCTCGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGACAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGTCGGCCGGAACAAGGCCGTC GACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTCGGCTAa ]
[+] EMBL AK066638 [ GTCATCCATAGCCATTGACGACGACGAGCTCTACTAGCAATCGATCGATCGAGTTCTCGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGACAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGTCGGCCGGAACAAGGCCGTC GACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTC GCTAGTCGGCCCCCTCGTCGCCGTCCTCGGCGGCGCGCTCGAGTTCGCCCTCAACCTCGCCAGCAACGTCCTCCATGGGAGAATGGAGTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGTTGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCATGGCGTCCAAGGTGGCGTACGAGAACGAGGCGTTCATCCGCGACGTCGTCACCCGCCGCTGGCAGATGGAGTTCGTCCAGTTCTTCAACTGCTGGAACGAGTTCGAGAACGCGTACACGGCGCAGGCGTTCGTGTTCTGCGACAAGGCGGCGGACGCGGAGCTGGTGGTGGTGGCGTTCCGGGGCACGCCGGCGCTGGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGAGTGCACGCCTACTACGCCATCCGCGACGCCGTGAAGCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCTGGTCGCCGGGCATGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCGCGACGGTGCTGGCGTACCACAAGGAGAAGGCGGCGCTGGACCGGCTCGCCGGCGTGTACACCTTCGGGCAGCCGCGGGTCGGCGACGCCATGCTCGCCATGTTCGCCGAGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCAAGGTGGTGAAGGAGTT GCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCAT CAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCT ACTG CCGGG AAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCG TTCCACAGGGT GCAGGACTACGTCAATGCCGTCACGC TCGCCGGC TCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTC ACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACAAGTACTACTAGTATAACTATGAGAAGATAAATAATTGAAG ]
[+] EMBL CB622424 [ GCTCTACCATTAATCGATCGATCGAGTTCTCGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGACAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGTCGGCCGGAACAAGGCCGTC GACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTC GCTAGTCGGCCCCCTCGTCGCCGTCCTCGGCGGCGCGCTCGAGTTCGCCCTCAACCTCGCCAGCAACGTCCTCCATGGGAGAATGGAGTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGTTGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCATGGCGTCCAAGGTGGCGTACGAGAACGAGGCGTTCATCCGCGACGTCGTCACCCGCCGCTGGCAGATGGAGTTCGTCCAGTTCTTCAACTGCTGGAACGAGTTCGAGAACGCGTACACGGCGCAGGCGTTCGTGTTCTGCGACAAGGCGGCGGACGCGGAGCTGGTGGTGGTGGCGTTCCGGGGCACGCCGGCGCTGGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTACTAC ]
[+] EMBL CB671572 [ ACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTTCCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTC GCTAGTCGGCCCCCTCGTCGCCGTCCTCGGCGGCGCGCTCGAGTTCGCCCTCAACCTCGCCAGCAACGTCCTCCATGGGAGAATGGAGTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGTTGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCATGGCGTCCAAGGTGGCGTACGAGAACGAGGCGTTCATCCGCGACGTCGTCACCCGCCGCTGGCAGATGGAGTTCGTCCAGTTCTTCAACTGCTGGAACGAGTTCGAGAACGCGTACACGGCGCAGGCGTTCGTGTTCTGCGACAAGGCGGCGGACGCGGAGCTGGTGGTGGTGGCGTTCCGGGGCACGCCGGCGCTGGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTACTACGCCATCCGCGACGCCGTGAAGCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCTGGTCGCCGGGCATGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCGCGACGGTGCTGGCGTACCACAAGGAGAAGGCGGCGCTGGAACGGCTCGC ]
[+] EMBL AA754547 [ nGCGCTGGACATGGCACGGTGGTGCGCCCACGTNGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTACTACGCCATCCGCGACGCCGTGAANCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCTGGTCGCCNGGCATGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCTNTACTGTGCTGGCGTNCCACAAGGAGAAAGCGGCGCTGGACCGGCTCGCCGGCGTGTNCACCTTCNGGCA CCGCGGGTCGGCGAC CCATGCTC CCATGTTCGCCGA ]
[+] EMBL CB628496 [ GGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAAGATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAACATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTACTACGCCATCCGCGACGCCGTGAAGCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCTGGTCGCCGGGCACGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCGCGACGGTGCTGGCGTACCACAAGGAGAAGGCGGCGCTGGACCGGCTCGCCGGCGTGTACACCTTCGGGCAGCCGCGGGTCGGCGACGCCATGCTCGCCATGTTCGCCGAGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCACGGTGGTGAAGGAGTT GCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCAT CAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCT ACTG CCGGG AAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCG TTCCACAGGGT GCAGGACTACGTCAATGCCGTCACGC TCGCCGGC TCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGA ]
[+] EMBL AU101723 [ GGCGGCGCTGGACCGNCTCGCCGGCGTGTACACCTTCGGGCAGCCGCGGGTCGGCGACGCCATGCTCGCCATGTTCGCCGAGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCAAGGTGGTGAAGGAGTT GCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCAT CAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCTAACTGCCCGGG AAGGGTGGCTGCTGATGGCGGCGANGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCGTTTCCACAAGGT GCAGGACTACGTCAATGCCGTCACGCTTCGCCGGCTTCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAG TGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGAATTGTCAACTTGTGTAA TGTAATGTGACGTAAGTACTGGTAGTAATTAATT ]
[-] EMBL CB684485 [ GGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGTTCCGCCGCGCACTTCCTCCACTTTGGCATCCGCCTCCACTTTGACAGCTTATACAACCTCAAGGTGGTGAAGGAGTT GCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCAT CAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCT ACTG CCGGG AAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCG TTCCACAGGGT GCAGGACTACGTCAATGCCGTCACGC TCGCCGGC TCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTC ACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACAAGTACTACTAGTATAACTATGAGAAGATAAATAATTGAAGTTACACAAAAAAGAA]
[+] EMBL AU101724 [ cCACGAGA CTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCNACAGCTTATACAACCNCAAGGTGGTNAAGGAGTTNCCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCATCCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGCCT ACTG CCGGGAAAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGGCCTGCCG TTCCACAGGGTGGCAGGACTACGTCAATGCCGTCACGC TCGCCGGC TCGAACATTCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTC ACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACAAGTACTACTAGTATAACTATGAGAAGATAAATAATTGAAaaaaaaa ]
consensusID : consensus_14791#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 774 fasta sequence
[AGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCACGGTGGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTA-CTGGAGGAGCGCCTA-CTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGG-GCGGCG-GCGGTGGCGCTGCCTGGCCTG-CCGTTCCACA-GGGTGCAGGACTACGTCAATGCCGTCACGCT-CGCCGGCTCGAACATTCCCA-AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGGCTTGTCA-CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA-CAA-GTACTACTA-GTATAACTATGTGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCAAAAAAAAAAAAAAGAAAAAAAAAAAAA]
[-] EMBL CB628497 [AGAGGAACCTGGACAGGCCGAGGAAGAGGCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCACGGTGGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTA CTGGAGGAGCGCCTA CTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGG GCGGCG GCGGTGGCGCTGCCTGGCCTG CCGTTCCACA GGGTGCAGGACTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGGCTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACCAAGGTACTACTAGGTATAACTATGTGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCAAAAAAAAAAAAAGGA ]
[-] EMBL CB622425 [ CCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCACGGTGGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTA CTGGAGGAGCGCCTA CTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGG GCGGCG GCGGTGGCGCTGCCTGGCCTG CCGTTCCACA GGGTGCAGGATTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGGCTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGTGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCAAAAAAAAAAAAAAGA ]
[-] EMBL CB671573 [ GCGCCTTCCGCACGAGAGCTCCGCCGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCAAGGTGGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAGCCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTA CTGGAGGAGCGCCTA CTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGG GCGGCG GCGGTGGCGCTGCCTGGCCTG CCGTTCCACA GGGTGCAGGACTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGAGAAGATAAATAATGGAAGTTCTTGTTT ]
[+] EMBL BI808019 [ CGTGGGAGCT GCCC GAGCGCGTACCTGGGGTATCTGGAGGAGCGCCTATCTGCCGGGAAGGGT GCTGCTGATGGCGGCGAGGCGC GC GC GTGGCTCTGCCTGGCCTG CCGTTCCACACGGGTGCAGGACTACGTCCATGCCGTCACGCT CGCCGGCTCGAACATTCCCACAGGACATGTGACGATGTATCGAGTTTCTGAATGCCATGCTGCAGAGACTGCAGCTGCAGGCATCCAACTTGGATGAGAGATTGCCACTGC ATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGGCTTGTCACCTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCCTTTGATGTACTGGGA CCA GTACTACTA GTATAACTATGTGAAaaa ]
[+] EMBL AT003654 [ CCTGGGGTA CTGGAGGAGCGCCNA CTCCCGGGAAGGGTGGCTTCTTATGCCGGCNAGG GCGGCG GCGGTGGCGCTGCCTGGCCTN CCGTTCCCCA GGGTGCAGGACTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTTTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGNGCNNCTGTNTGTTGTCGCGACTAATTNTGCTTNTNCTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGAGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTNNCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM419318 [ GCGGCGA G GC GCG GCGGTGGC CTGCCTGGCCT CCGTTCCACA GGGTGCAGGACTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGGCTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGTGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCACTCAAAAAAAAAA ]
[+] EMBL BI810751 [ aGGCGCGCGGTGGC CTGCCTGGCCT CCGTTCCACA GGGT CAGGACTACGTCAATGCCGTCACGCT CGCCGGCTCGAACATTCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGA CAGGCTATGGGGCTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGA TTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGTGAAGATAAATAATTGAAGTTCTTG ]
[+] EMBL AU056751 [ CCTGCCCGTTCCACA GGGTGCAGG CTACGTCAATNCCGTCACGCTCCGCCGGCTCGAACATNCCCA AGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCTGCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCATCGAGCAGGCTATGGGACTTGTCA CTTGTGTAACTGTAATGTGACGTACGTACTGGTAGTAATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACATGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGA CAA GTACTACTA GTATAACTATGAGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCActcaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14791#0 GTTACACTTCACAGCTTTATTTTGTGAACGCCATTTAGTTTATTTTACTCGGCCTGCATA 60
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GCGGAGAGGTAGCGAGAATGCTAGATAGATATCTGGAGTCGTCGTCGTCGTCGTCGTCGA 120
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CTTGTCATCCATAGCCATTGACGACGACGAGCTCTACTATCAATCGATCGATCGAGTTCT 180
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CGCCGCCATGAGCAAGCTCGACTACTGCTTCAGCAATGACTACATGGTGCTGCGCCCTGA 240
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CAGGGCCGGCGCGTACGAGCTCCTGCACCTCCTCTTCTCCCCCAAGGTCGGCCGGAACAA 300
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GGCCGTCGACTGCTTCACCAGCACCGAGCTCCACAGCTTCCGGCGCCGCCTCTCCATCTT 360
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CCTCAACCTCCTCCTGCAGCTCTTCCTCCTCTCGCTAGTCGGCCCCCTCGTCGCCGTCCT 420
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CGGCGGCGCGCTCGAGTTCGCCCTCAACCTCGCCAGCAACGTCCTCCATGGGAGAATGGA 480
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GTATCCTGATCGGAAGTCGGCGTCGTACCGATCAATCACCGGGCTCATCGACCCGAGGGT 540
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 TGATCTGGAGAGGAGCATCACGCCGGCGGACAGCCGGTACCACGCCGCGCTCTGCGTCAT 600
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GGCGTCCAAGGTGGCGTACGAGAACGAGGCGTTCATCCGCGACGTCGTCACCCGCCGCTG 660
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GCAGATGGAGTTCGTCCAGTTCTTCAACTGCTGGAACGAGTTCGAGAACGCGTACACGGC 720
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GCAGGCGTTCGTGTTCTGCGACAAGGCGGCGGACGCGGAGCTGGTGGTGGTGGCGTTCCG 780
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GGGCACGCCGGCGCTGGACGTGGCGCGGTGGTGCGCCGACGTGGACCCGTCGTGGTACAA 840
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GATCCCGCGGCTGGGGCGCGCGCACGCGGCGTACACGCACGCGCTGGGCGCGCAGCGGAA 900
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CATCGGGTGGCCCAAGTGGGTGGAGCACGTGAAGGGCAAGCCGCAGCGGGTGCACGCCTA 960
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CTACGCCATCCGCGACGCCGTGAAGCGGCTGCTGGAGGCGAACGGCAGGGCGAGGGTGCT 1020
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GGTCGCCGGGCATGGCTCCGGCGGCGCGCTGGCGGTGCTGTTCGCGACGGTGCTGGCGTA 1080
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 CCACAAGGAGAAGGCGGCGCTGGACCGGCTCGCCGGCGTGTACACCTTCGGGCAGCCGCG 1140
consensus_14791#1 ------------------------------------------------------------
consensus_14791#0 GGTCGGCGACGCCATGCTCGCCATGTTCGCCGAGAGGAACCTGGACAGGCCGAGGAAGAG 1200
consensus_14791#1 --------------------------------AGAGGAACCTGGACAGGCCGAGGAAGAG 28
****************************
consensus_14791#0 GCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGC 1260
consensus_14791#1 GCACTTCCGGATCACCTACGGCGACGACCCGCTGCCGCGCCTTCCGCACGAGAGCTCCGC 88
************************************************************
consensus_14791#0 CGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCAAGGT 1320
consensus_14791#1 CGCGCACTTCCTCCACTTCGGCATCCGCCTCCACTTCGACAGCTTATACAACCTCACGGT 148
******************************************************** ***
consensus_14791#0 GGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAG 1380
consensus_14791#1 GGTGAAGGAGTTGCCGGGAGATGGGAGCTCGTCGTCGTCGGCGGCGGAGTTCGCGACGAG 208
************************************************************
consensus_14791#0 CCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGC 1440
consensus_14791#1 CCGCATCAACGCGGCGTGGGAGCTGGCCCGGAGCGCGTACCTGGGGTACTGGAGGAGCGC 268
************************************************************
consensus_14791#0 CTACTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGG 1500
consensus_14791#1 CTACTGCCGGGAAGGGTGGCTGCTGATGGCGGCGAGGGCGGCGGCGGTGGCGCTGCCTGG 328
************************************************************
consensus_14791#0 CCTGCCGTTCCACAGGGTGCAGGACTACGTCAATGCCGTCACGCTCGCCGGCTCGAACAT 1560
consensus_14791#1 CCTGCCGTTCCACAGGGTGCAGGACTACGTCAATGCCGTCACGCTCGCCGGCTCGAACAT 388
************************************************************
consensus_14791#0 TCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCT 1620
consensus_14791#1 TCCCAAGGACATGTGACGATGTATCGAGTTTCTGAATGCAATGCTGCAGAGACTGCAGCT 448
************************************************************
consensus_14791#0 GCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCA 1680
consensus_14791#1 GCAGGCATCAAACTTGGATGAGAGATTGCAACTGCAATATAATGGCAGATGACGACTGCA 508
************************************************************
consensus_14791#0 TCGAGCAGGCTATGGGACTTGTCACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGT 1740
consensus_14791#1 TCGAGCAGGCTATGGGGCTTGTCACTTGTGTAACTGTAATGTGACGTACGTACTGGTAGT 568
**************** *******************************************
consensus_14791#0 AATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACA 1800
consensus_14791#1 AATTAATTACGGGTGCAACTGTATGTTGTCGCGACTAATTCTGCTTCTACTGAATAAACA 628
************************************************************
consensus_14791#0 TGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACA 1860
consensus_14791#1 TGTAGTGATAAGTGATATGCTTGTGAGTTGTGACTTGTAAGCATTTGATGTACTGGGACA 688
************************************************************
consensus_14791#0 AGTACTACTAGTATAACTATGAGAAGATAAATAATTGAAGTTA------------CACAA 1908
consensus_14791#1 AGTACTACTAGTATAACTATGTGAAGATAAATAATTGAAGTTCTTGTTTTCGTTTCTCAA 748
********************* ******************** * ***
consensus_14791#0 AAAAGAA------------------- 1915
consensus_14791#1 AAAAAAAAAAAAGAAAAAAAAAAAAA 774
**** **
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||