These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1756 fasta sequence [TGGGCGTCAGGACCACT-CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT-ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT-CGTCTGGGATAGAAATGAGGAGTATG-AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA-CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT-GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA-CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC-AGTT-CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAAAAGGTAATAAGGCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCTTTGATAAAAAAAAAAA] [+] EMBL AK069367 [TGGGCGTCAGGACCACT CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAGAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATT ] [+] EMBL CB667078 [ ACTCCCCCTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACcg ] [+] EMBL CB649966 [ ACT CCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTT ] [+] EMBL CB643800 [ ACT CCCTCTTGGAGCGGCGGAGATCGGAATCGGGGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCCGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGATGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGTAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAAGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTTCTTTGA ] [+] EMBL AU085884 [ CCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCG CATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTT CCTANACTGATGCTTTTTAT CACGGGGT CCCATCG ATANATGGGTTCAAGAAA NTGACTTG ] [+] EMBL CB661649 [ GAATCGGCGGCGATGGCGGCGACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACTTCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGA ] [+] EMBL CB669215 [ CTGCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGATCATTGGGTTTGGGGAGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATG ] [+] EMBL CB669216 [ GCTGCTCTCCTTCCATGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCGGGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTTCGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTATATGAAGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAGATGCTGACAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTTTATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAATCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAGCTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTCGTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGATTTTTCTGAGGACTTCATGGTCACTT ] [+] EMBL BI118715 [ AAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAGGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATGAAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAARCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAG ACAACCAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATATATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTG AAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAAAGGTCAGGTTTCAAACTTCCAAGT GATGCAGTCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGCTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAGC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCA ] [+] EMBL CF327550 [ CCATTTGAAGGAAGTTTCTTGGAAGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAA ] [-] EMBL CB649967 [ ACAGAGACACTCAAAATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTGGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAga ] [-] EMBL CB661650 [ ACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGAAACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGTGTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGACCAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTCAAAAAAAAAAAAAGG ] [-] EMBL CB643801 [ CGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCTCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTATTATATGTGTCTTCGCTGTTTTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTTCCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATGTAGTTGTGCCTTGCGCAGTAGTGCTTTCCTGCGGTTTTGCCTTCTGTTCCTTTGTTTATTTGTTAATTAGAA GTAAAAGTAGCTTCCACATGTGCATGATAGAAAATGTGATTGTTAGTTCACTTATAATTTGAGC GGTTGATGTGAAA ] [+] EMBL AK058722 [ GAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGAT ATTTCCAAGAGCTCACAGCTGCCAAAGCTAAT CGTCTGGGATAGAAATGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAAC ] [+] EMBL AU085885 [ TTTGATAATTTCCAAGAGCTCACAGCTNCCAAAGCTAATCCGTCTGGGATAGANATGAGGAGTATGCAAGTGGTGGAAGGCCCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCNTGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCT CTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAA ] [-] EMBL CB629679 [ TGAGGAGTATG AAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAA CAAAGAAGAAAGTCGGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTGTTCGCTCTTCTGGGTGTCAGGATATACTTTACTGGGCAAGAGGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGT GATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTCCCTTCTGTTCCTCTGTTTATTGGTTAATTAGAAGGTAAAACTAGCTTCCACATGTGCATGATAGAAAATGGGATTCTTAGTTCAGTTCTAATTTGAACGAGTT TTGAGGGAAATATTT ] [-] EMBL CF327551 [ AGTGGCCCATCTTTCATGGGTTTCCTGAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGGTGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTAGATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATTCTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTCCTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAA CTAAAACTAGCTTCCACATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAAC AGTT CTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTACAAGTGATACAATAGTAATAAGGCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCTTTGATAAAAAAAAAAA] consensusID : consensus_14793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence [AATGAGGAGTATGAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGGGGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATTTTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTCCTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCACATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT] [-] EMBL CB669217 [AATGAGGAGTATGAAGTGGTGGAAGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGGATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCTGAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGGGGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGAGTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGAGGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATTTTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTCCTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCACATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAAAATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14793#0 TGGGCGTCAGGACCACTCCCTTCCGGCGCGGCGGAGATCGGAATCGGCGGCGATGGCGGC 60 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GACGACGACGAGACCCCTCCCCCTCCTCCTCCTGCTGCTTCTGCCTCCTCTCCTCCTCCT 120 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GCTGCTCTCCTTCCACGCCGCCGCCGCCGCCGCCGCCGAGGAGTTCCCGCGCGACGGGCG 180 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GGTGATAGAGCTGGACGAGAGCAGCTTCGAGGCGGCGCTGGGCGCCATCGACTACCTCTT 240 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 CGTCGACTTCTACGCGCCATGGTGCGGCCACTGCAAGCGCCTCGCCCCCGAGTTAGATGA 300 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 AGCTGCACCGGTGTTGGCAGGACTGAGTGAGCCCATCATAGTTGCCAAAGTAAATGCTGA 360 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 CAAGTACAGGAAGCTTGGATCGAAATATGGAGTGGACGGGTTCCCTACACTGATGCTTTT 420 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 TATCCACGGGGTCCCCATCGAATACACTGGTTCAAGAAAAGCTGACTTGCTTGTCCGCAA 480 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 TCTTAATAAGTTTGTTGCACCTGATGTTTCTATTCTTGAGTCGGACTCTGCGATCAAGAG 540 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 CTTTGTTGAGAATGCTGGCACGAGCTTTCCAATGTTCATTGGGTTTGGGGTGAATGAGTC 600 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GTTGATTGCTGGTTATGGAGGGAAATACAAGAAAAGAGCATGGTTTGCTGTTGCAAAAGA 660 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 TTTTTCTGAGGACTTCATGGTCACTTATGATTTTGATAAGGTTCCTGCATTGGTTTCACT 720 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 TCATCCAAAGTACAAAGAACAAAGTGTATTTTATGGCCCATTTGAAGGAAGTTTCTTGGA 780 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 AGATTTTATACGGCAATCCCTGCTTCCTTTGACTGTCCCCATCAACACAGAGACACTCAA 840 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 AATGTTGGATGATGATGACAGAAAAGTTGTTCTTGCAATTTTGGAGGATGATTCAGATGA 900 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 AACTTCTTCACAGTTGGTAAAAGTTTTGAGGTCTGCTGCCAATGCAAACCGTGACTTGGT 960 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GTTTGGGTATGTCGGAATCAAACAATGGGATGAGTTTGTCGAGACTTTTGATATTTCCAA 1020 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 GAGCTCACAGCTGCCAAAGCTAATCGTCTGGGATAGAAATGAGGAGTATGAAGTGGTGGA 1080 consensus_14793#1 -------------------------------------AATGAGGAGTATGAAGTGGTGGA 23 *********************** consensus_14793#0 AGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTCTCAAATAAGCCAATTCCTTGAGGG 1140 consensus_14793#1 AGGCTCAGAGAAGTTAGAGGAAGGTGATCAAGCTTTTCAAATAAGCCAATTCCTTGAGGG 83 *********************************** ************************ consensus_14793#0 ATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCT 1200 consensus_14793#1 ATATAGAGCAGGAAGAACAACAAAGAAGAAAGTCAGTGGCCCATCTTTCATGGGTTTCCT 143 ************************************************************ consensus_14793#0 GAACTCTCTTGTCAGCCTGAACTCGCTATACATTCTTATATGTGTCTTCGCTCTTCTTGG 1260 consensus_14793#1 GAACTTTTTTGTCAGCCTGAACTCGCTATACATTTTTATATGTGTTTTCGCTCTTTTTGG 203 ***** * ************************** ********** ********* **** consensus_14793#0 TGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGA 1320 consensus_14793#1 GGTCATGATATACTTTACTGGGCAAGATGATACTCCTCAGGTAAGACGAGCTCATGAAGA 263 *********************************************************** consensus_14793#0 GTGAAAGAAGCTTACCAAAAGAGGCTATCCACCAAGAGATACATATATATATAGTTCAGA 1380 consensus_14793#1 GTGAAAGAAGCTTACCAAAAGAGGGTATCCCCCAAGAGATACATATATATATAGTTCAGA 323 ************************ ***** ***************************** consensus_14793#0 GGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGACCTGGTTTTATTGGTTGATT 1440 consensus_14793#1 GGTCAGGTTTCAAACTTCCAAGTGATGCAATCCTGAAGGGCCTGGTTTTATTGGTTGATT 383 *************************************** ******************** consensus_14793#0 CTGACATTATTGTATCTCTGTCGGCAATTATCTAGTTGTGCCTTGTGCAGTTGTGCTCTC 1500 consensus_14793#1 TTGACATTATTGTATTTCTGTCGGCAATTATTTAGTTGTGCCTTGTGCAGTTGTGCTTTC 443 ************** *************** ************************* ** consensus_14793#0 CTGCGGTTCTGCCTTCTGTTCCTCTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCA 1560 consensus_14793#1 CTGCGGTTTTGCCTTTTGTTCCTTTGTTTATTTGTTAATTAGAACTAAAACTAGCTTCCA 503 ******** ****** ******* ************************************ consensus_14793#0 CATGTGCATGATAGAAAATGTGATTCTTAGTTCAGTTCTAATTTGAACAGTTCTGTGAAA 1620 consensus_14793#1 CATGTGCATGATAGAAAAAGGGATTTTTAGTTCAGTTTTAATTTGAACAGTTCTGTGAAA 563 ****************** * **** *********** ********************** consensus_14793#0 AATATTTTTGTTGTCCAACTATTGCCAAAACGTTTGTAAAAAAAAAAAAAAGGTAATAAG 1680 consensus_14793#1 AATATTTTTGTTGTCCAACTATTGCCAAAAAAGGGGTACAAGTGATACAAT--------- 614 ****************************** *** ** * * ** consensus_14793#0 GCGTGTATATCTGGAGCGAGGTTTTGTTTACTGCTAGGCTTTTATTTATCACTGCTACCT 1740 consensus_14793#1 ------------------------------------------------------------ consensus_14793#0 TTGATAAAAAAAAAAA 1756 consensus_14793#1 ---------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||