cluster # 1480

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Oryza sativa
cluster # 1480 cluster # 1480 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1480#0 length = 615 sequences # 2

consensusID : consensus_1480#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 615
fasta sequence

                              [AAATTATAATCTATTCATTTCTCGTCTTAGCTTTAACAAGCTACAGTACAGCAACTTCATTTCGAACGGATTCTTTATTATCATCATGTCCAATTAAATTGTACAATCCAGGTGAACCATCATTATTTACAGGCGAACAAATCTATGCCAATGTTGAAACATTTCATCCATTACTCGATGTTCTTGCTGATTATGCTAAACGTTGTCATTTAAGACTTCGTGTTAAACGATCGTATGTTAAAGAACCATCAGCACTTTCTCATTCGATGCGTGATGAACAAACTGGATTATTATTTCAATTAGGTGAAGCTATTGAAGTTGAACCTGTTAATAAAATGAATAAAGTTATTTGTGATCGTATGTGTATGAAATTCGAATCGAAATCAATCGATCGTAATGATGATGCTAAATGTTTCATTCGTAAAATGGAAAA-GATCATCGATTCGAACAAGATAGAAATCAACCGAATATTTTCATGATTCGATCGAAAACCAATTTCAACACCGAAAAAACTCGATCAACGCCGTCGTGATTTACAGAA-AATTGCGAACGGCCTTCGTCGAAATAAATCCTTTTAAATAAATTTTTC-TTTCCTAATAAAAAAATCATATCTAA]

[+] EMBL CA755687             [AAATTATAATCTATTCATTTCTCGTCTTAGCTTTAACAAGCTACAGTACAGCAACTTCATTTCGAACGGATTCTTTATTATCATCATGTCCAATTAAATTGTACAATCCAGGTGAACCATCATTATTTACAGGCGAACAAATCTATGCCAATGTTGAAACATTTCATCCATTACTCGATGTTCTTGCTGATTATGCTAAACGTTGTCATTTAAGACTTCGTGTTAAACGATCGTATGTTAAAGAACCATCAGCACTTTCTCATTCGATGCGTGATGAACAAACTGGATTATTATTTCAATTAGGTGAAGCTATTGAAGTTGAACCTGTTAATAAAATGAATAAAGTTATTTGTGATCGTATGTGTATGAAATTCGAATCGAAATCAATCGATCGTAATGATGATGCTAAATGTTTCATTCGTAAAATGGAAAA GATCATCGATTCGAACAAGATAGAAATCAACCGAATATTTTCATGATTCGATCGAAAACCAATTTCAACACCGAAAAAACTCGATCAACGCCGTCGTGATTTACAGAA AATTGCGAACGGCCTTCGTCGAAATAAATCCTTTTAAATAAATTTTTC TTTCCTAATAAAAAA           ]
[+] EMBL CA753740             [       AATCTATTCATTTCTTGTCTTAGCTTTAACAAGCTACAGTACAGCAACTTCATTTCGAACGGATTCTTTATCATCATCATGTCCAATTAAATTGTACAATCCAGGTGAACCATCATTATTTACAGGCGAACAAATCTATGCCAATGTTGAAACATTTCATCCATTACTCGATGTTCTTGCTGATTATGCTAAACGTTGTCATTTAAGACTTCGTGTTAAACGATCGTATGTTAAAGAACCATCAGCACTTTCTCATTCGATGCGTAATGAACAAACTGGATTATTATTTCAATTAGGTGAAGCTATTGAAGTTGAACCTGTTAATAAAATGAATAAAGTTATTTGTGATCGTATGTGTATGAAATTCGAATCGAAATCAATCGATCGTAATGATGACGCTNAATGTTTCATTCGTAAAATGGAAAACGATCATCGATTCGAACAAGATAGAAGTCAACCGAATATTTTCATGATTCGATCGAAATCC ATTCGAACACCGAAAAAACTCGATCAACGTCGTCGTGATTTACAGAATAGTTGCGAAC GTCTTCGTCG AATAAATTCTTTTAAAATAATTTTTCTTTTCTTAATAAATTAATCATATCTAA]




>consensus_1480#0
AAATTATAATCTATTCATTTCTCGTCTTAGCTTTAACAAGCTACAGTACAGCAACTTCAT
TTCGAACGGATTCTTTATTATCATCATGTCCAATTAAATTGTACAATCCAGGTGAACCAT
CATTATTTACAGGCGAACAAATCTATGCCAATGTTGAAACATTTCATCCATTACTCGATG
TTCTTGCTGATTATGCTAAACGTTGTCATTTAAGACTTCGTGTTAAACGATCGTATGTTA
AAGAACCATCAGCACTTTCTCATTCGATGCGTGATGAACAAACTGGATTATTATTTCAAT
TAGGTGAAGCTATTGAAGTTGAACCTGTTAATAAAATGAATAAAGTTATTTGTGATCGTA
TGTGTATGAAATTCGAATCGAAATCAATCGATCGTAATGATGATGCTAAATGTTTCATTC
GTAAAATGGAAAAGATCATCGATTCGAACAAGATAGAAATCAACCGAATATTTTCATGAT
TCGATCGAAAACCAATTTCAACACCGAAAAAACTCGATCAACGCCGTCGTGATTTACAGA
AAATTGCGAACGGCCTTCGTCGAAATAAATCCTTTTAAATAAATTTTTCTTTCCTAATAA
AAAAATCATATCTAA

clustalw multiple alignements is not computed in this case