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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14810#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1538 fasta sequence
[AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC-G----GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG-AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAAC----GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA-TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC-AGCATGTAGGGATTCCTGAC-AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA-AG-GGG-AATAGATTCTCATGGC---CAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL AU062920 [AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTAATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGG GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTNCCATTTG ]
[+] EMBL CB671320 [ GGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC GGTCAGGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGATAGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATAT ]
[+] EMBL CF303940 [ CGGCTCCAACCTGGGGCGACGGTTCCCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC G GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGAT AAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATT ]
[+] EMBL CB674193 [ CCCACGCCCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGGTACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCAGGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGCTTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTC G GGGAAAACATTGCTGGCAAAAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTCAGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTGATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAACAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTG AAGGTGTTCAACAAGCACTGCTAAAAATGCTTGAGGGAACGATAGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCA ]
[+] EMBL CB000842 [ AGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTT ]
[+] EMBL CB000801 [ AGGGAAC GGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGCACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTGCTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCCAAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCTCGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAA ]
[-] EMBL CB645264 [ GATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTCTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAATAAAAGGTAA AG GGG AATAGATTC ]
[-] EMBL CB674194 [ ATTGATCCCAGAATTTGTTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTTGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCA TTGGACCTTTTCTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGGGCAATTTTTTTTGGGGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AAAAAA AAAAA AAAAAAAAAAAAAAAAAAAAGA]
[+] EMBL BQ529306 [ TGTTTGAAATGAATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGG ]
[+] EMBL BI798535 [ TCCAGAAATACGAACTGGAAAAGACCAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCACTTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC ACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGC ATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AATAGATTCTCATGGC CAAAAAAAAAA ]
[+] EMBL BI798431 [ TCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCA TTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAAGCATGTAGGGATTCCTGACAAACAGTAATTATGTATATAACTTGTTACCGCCCATGTAACTGTAGCCAATTCAAAGGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTCCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTG GACATTTTTTTAAAAAGAAAAGGTAA AGCGGGCAATAGATTCTCATGGC CAAAAAAAAAA ]
[+] EMBL BI798162 [ TCCAGAAATACGAACTGGAAAAGACCAAATAGACGCGGTTGTTGTTGACGAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCACTTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGCCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAACAG CCG CATAGATTCTCATGCC CAAAAAAAAAAAA ]
[+] EMBL AA752025 [ ggcacgaGTGGAGAAGGA NN TTGNACCTATACTTGGATTAACATTANANAGAAACNACGNTACGACCGNCGGAGAAGGTGGATNGAAAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTACGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTA CCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCNGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AN GGG AATATATTCT ]
[+] EMBL AU057392 [ nCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGANCCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAA AG GGG AATAGATTCTCATGGCNNTGATGAAAAAAAAAAAAAAAA ]
[+] EMBL BI797457 [ AGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCC AGCATGTAGGGATTCCTGAC AACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCC ATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGT C ATTTCTCTTGGCGATC AAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGACAAGGTAA AG GGG AATAGATTCTCAT GC CAAAA ]
consensusID : consensus_14810#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence
[TTAATTGCATATGGATTGATTCCAGAATTTGTTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAGGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAATTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAATTTCTCATGGGGATCATCCCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT]
[-] EMBL CB645263 [TTAATTGCATATGGATTGATTCCAGAATTTGTTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGACCAACTTGTTGAGGTTTTTACAAAACCAAAGAATGCCCTAGGCAGGCAGTATACAAAGTTGTTTGAAATGAATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAGCGAAGAACACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCCATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAGGAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAAGGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAATTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAATTTCTCATGGGGATCATCCCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT]
consensusID : consensus_14810#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAGGTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGAAGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAGGGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCCATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGCGAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAGAAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCCTGATGAAAAAAAAAAAAAAA]
[-] EMBL CA759731 [AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAGGTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGAAGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAGGGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCCATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGCGAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAAGGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAGAAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAATTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCCTGATGAAAAAAAAAAAAAAA]
consensusID : consensus_14810#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[AAGTTTATGGCTTAATCCAAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAAAAAGATTTGTTGGATTTCCAAAAAAGCAGGTTTTGAACCCAAATTTTTTGGGAAGAAGAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC]
[-] EMBL AW155626 [AAGTTTATGGCTTAATCCAAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAAAAAGATTTGTTGGATTTCCAAAAAAGCAGGTTTTGAACCCAAATTTTTTGGGAAGAAGAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAGAAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAGGGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAATTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAATTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAAGGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 AGGGGGGTGGTGGTGGTGCGGGGTGGGGCGGCTCCAACCTGGGGCGACGGTTCCCCACGC 60
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 CCAAGGAGATTTGCCGTGGGCTCGATAAGTTCGTCATCGGCCAGGAGCGCGCCAAGAAGG 120
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 TACTGTCTGTAGCAGTTTATAACCACTATAAAAGGATACACTGCGAGTTACTCTCCAGCA 180
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 GGTCTGCTGGAGATTGTAGCGAGACTGATTCTTGCGCGAGTGATACTGATGGAGTGGAGC 240
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 TTGAGAAAAGCAACATCCTTGTGATGGGTCCGACAGGCTCGGGGAAAACATTGCTGGCAA 300
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 AAACCCTTGCAAGGTTTGTGAATGTGCCATTTGTTATAGCTGATGCAACAACCCTCACTC 360
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 AGGCTGGATATGTTGGCGAGGATGTTGAATCTATCCTGTATAAGCTCCTAGCGGCTGCTG 420
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 ATTTTGATGTAGCTGCTGCTCAGCAAGGGATTGTCTATATTGACGAAGTTGATAAAATAA 480
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 CAAAGAAGGCTGAAAGCATCAACCTTAGTAGAGATGTTTCAGGTGAAGGTGTTCAACAAG 540
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 CACTGCTAAAAATGCTTGAGGGAACGGTCGTTAGTGTTCCTGAGAAAGGGGCTAGAAGGC 600
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 ACCCAAGGGGTGACAATATCCAGATTGATACAAAAAACATTCTCTTCATTTGTGGTGGTG 660
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 CTTTTGTTGATTTGGAGAAGACTATTTCGGAAAGGAGACATGATTCTTCCATTGGTTTCC 720
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 AAGCACCAATTCGTTCAAATATGCGGACTGGGGGTGTGATAAATGCTGAGATCACATCCT 780
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------------------------------------------
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 CGTTACTCGAATCAGTTGAAAGTGGTGATCTCATTGCATATGGATTGATCCCAGAATTTG 840
consensus_14810#1 -----------------------------TTAATTGCATATGGATTGATTCCAGAATTTG 31
consensus_14810#2 --------------------AAGGGAGGATCTTGCCCTAGGGAGGGGCCCGCTTCTTAAG 40
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 TTGGTAGATTTCCCATTCTTGTTAGTCTATCTTCCCTTAGTGAAGA-CCAACTTGTTGAG 899
consensus_14810#1 TTGGTAGATTTCCCATTTTTGGTAGTCTATCTTCCCTTAGTGAAGA-CCAACTTGTTGAG 90
consensus_14810#2 GTTTTTCCAGAACCAAGGGATTCCCCTAACGCCGACCGTACCCGAATTGGTTTAAACTGA 100
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 GTTCTTACAAAACCAAAGAATGCCCT--AGGCAGGCAGTATACAAAGTTGTTTGAAATGA 957
consensus_14810#1 GTTTTTACAAAACCAAAGAATGCCCT--AGGCAGGCAGTATACAAAGTTGTTTGAAATGA 148
consensus_14810#2 AGGACCCCGGCGTCCCTTTTACTGAGAGGCCTTTGGCACTTTTTTCCGAAAGAGCCATAG 160
consensus_14810#3 ------------------------------------------------------------
consensus_14810#0 ATGATGTCAAGTTGCATTTTACTGAGAAGGCTTTACGGCTTATTTCCAAAAGAGCAATAG 1017
consensus_14810#1 ATGATGTCAAGTTGCATTTTAGTGAGAAGGCTTTACGGCTTATTTTTAAAAGAGCAATAG 208
consensus_14810#2 GGCAGAGGCACTGGAGCCCTAGGCTTAAGGTCCATATTGGAAAGGTGATTGTTTGGGTCC 220
consensus_14810#3 -----------------------------------------AAGTTTATGGCTTAA-TCC 18
consensus_14810#0 CGAAGAA-CACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCC 1076
consensus_14810#1 CGAAGAA-CACTGGAGCTCGAGGTTTAAGGTCAATATTAGAAAGTTTATTGACTGAATCC 267
*** * ** * * ***
consensus_14810#2 ATGTCCGAGGTTCCCGAAATTCGACCTGGAAAAGACAAAATTGACGCGGGTGTTGTTGGC 280
consensus_14810#3 AAGTACGAGATTCCCAAAATTCGAACTGGAAAAGACCAAATAAAGGCGGTTGGTTTTTAA 78
consensus_14810#0 ATGTACGAGATTCCAGAAATACGAACTGGAAAAGACAAAATAGACGCGGTTGTTGTTGAC 1136
consensus_14810#1 ATGTAGGAGATTCCAGAAATACGAAGTGGAAAAGACAAAATAGATGCGGTTGTTGTTGAG 327
* ** *** **** **** *** ********** **** * **** ** * **
consensus_14810#2 GAAAACTTTGTTGGATCTACAAATTAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAA 340
consensus_14810#3 AAAGA-TTTGTTGGATTTCCAAAAAAGCA-GGTTTTGAACCCAA-ATTTTTTGGGAAGAA 135
consensus_14810#0 GAAGACTCTGTTGGATCTACAAATCAGCATGGTTCTGGAGCCAAGATTCTTTGTGGAGAA 1196
consensus_14810#1 GAAGACTTTGTTGGATTTACAAATCAGCATGGTTTTGGAGCCAAGATTTTTTGTGGAGAA 387
** * * ******** * **** **** **** ** * **** *** **** * ****
consensus_14810#2 GGAGCCTTGGCCCTTTCCTTGGATGAACATAATAAAGAATCAACGCTTCCGCGGTTGGAG 400
consensus_14810#3 GAAGCATTGGCCCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAG 195
consensus_14810#0 GGAGCATTGGACCTTTACTTGGATGAACATAATAAAGAATCAACGCTACGACGGTCGGAG 1256
consensus_14810#1 GGAGCATTGGACCTTTATTTGGATGAACATAATAAAGAATCAACGCTACGACGGTTGGAG 447
* *** **** ***** ***************************** * **** ****
consensus_14810#2 AAGGTGGATGGAGAACCTGGCATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 460
consensus_14810#3 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 255
consensus_14810#0 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTCTAGAGTGGCCAGCATGTAG 1316
consensus_14810#1 AAGGTGGATGGAGAACCTGACATTGATACAGAAGCCCCTTTTAGAGTGGCCAGCATGTAG 507
******************* ******************** *******************
consensus_14810#2 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGCCATGTAACTGTAGCCAA 520
consensus_14810#3 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAACCAA 315
consensus_14810#0 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATCGGCCATGTAACTGTAGCCAA 1376
consensus_14810#1 GGATTCCTGACAACAGTAATTATGTATATAACTTGTTATTGGGCATGTAAGTGTAGCCAA 567
*************************************** ** ******* **** ****
consensus_14810#2 TTCAAATGTAAAGTCATCCTCCTTATACATTCATGTATAAGGTCCATGTTGGGGGTGCAA 580
consensus_14810#3 TTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAA 375
consensus_14810#0 TTCAAATGTAAAGTCATCCTCCTCATACATTCATGTATAAGGTCCATGTCGGGGGTGCAA 1436
consensus_14810#1 TTCAAATGTAAAGTCATCTTCCTCATACATTTATGTATTAGGTGTATGTTGGGGGTGCAA 627
****************** **** ******* ****** **** **** **********
consensus_14810#2 TTTTTTTTGGCGATCAAAACCTTCCCCTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAA 640
consensus_14810#3 TTTTTTTTGGCGATCAAAACCTTCCCTTTTTGTGACATTTTTTTAAAAAGAAAAGGTAAA 435
consensus_14810#0 TTTCTCTTGGCGATCAAAACCTTCCCTTTCTGTGACATTTTTTTAAAAAGAAAAGGTAAA 1496
consensus_14810#1 TTTCTCATGGGGATCATC-CCCACCACCACCACCACCCCCCGCCGCAACCTTAAGGACAT 686
*** * *** ***** ** ** ** ** **** *
consensus_14810#2 GGGGAATAGATTTTCATGGCCCTGATGAA-----AAAAAAAAAAAAA------------- 682
consensus_14810#3 GGGGAATAGATTTTCATGGCCATGATGAAGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAA 495
consensus_14810#0 GGGGAATAGATTCTCATGGCCAAAAAAAA-----AAAAAAAAAAAGA------------- 1538
consensus_14810#1 ------------------------------------------------------------
consensus_14810#2 ------------------------
consensus_14810#3 AAAAAAAACTCGAGACTAGTTCTC 519
consensus_14810#0 ------------------------
consensus_14810#1 ------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||